RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
PNKP-224ENST00000631020 SHANK2Q9UPX8 1470 aa28.53■■■□□ 2.16
PNKP-224ENST00000631020 CROCC2H7BZ55 1655 aa28.52■■■□□ 2.16
PNKP-224ENST00000631020 ZNF142P52746 1687 aaPredicted RBP28.52■■■□□ 2.16
PNKP-224ENST00000631020 RNF17Q9BXT8 1623 aaKnown RBP28.52■■■□□ 2.16
PNKP-224ENST00000631020 FAM50AQ14320 339 aaKnown RBP28.51■■■□□ 2.15
PNKP-224ENST00000631020 MYO3AQ8NEV4 1616 aa28.5■■■□□ 2.15
PNKP-224ENST00000631020 RRBP1Q9P2E9 1410 aaKnown RBP28.5■■■□□ 2.15
PNKP-224ENST00000631020 DNMT1P26358 1616 aaKnown RBP28.48■■■□□ 2.15
PNKP-224ENST00000631020 ABCC5O15440 1437 aa28.47■■■□□ 2.15
PNKP-224ENST00000631020 DUOX2Q9NRD8 1548 aa28.47■■■□□ 2.15
PNKP-224ENST00000631020 NCOA1Q15788 1441 aa28.46■■■□□ 2.15
PNKP-224ENST00000631020 PZPP20742 1482 aa28.45■■■□□ 2.15
PNKP-224ENST00000631020 WASHC2CQ9Y4E1 1318 aa28.45■■■□□ 2.14
PNKP-224ENST00000631020 ZC3H13Q5T200 1668 aaKnown RBP28.45■■■□□ 2.14
PNKP-224ENST00000631020 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
PNKP-224ENST00000631020 PTPRTO14522 1441 aa28.44■■■□□ 2.14
PNKP-224ENST00000631020 DAPK1P53355 1430 aa28.43■■■□□ 2.14
PNKP-224ENST00000631020 FBXO41Q8TF61 875 aa28.43■■■□□ 2.14
PNKP-224ENST00000631020 CAMSAP1Q5T5Y3 1602 aa28.42■■■□□ 2.14
PNKP-224ENST00000631020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.42■■■□□ 2.14
PNKP-224ENST00000631020 PLA2R1Q13018 1463 aa28.39■■■□□ 2.14
PNKP-224ENST00000631020 ERBINQ96RT1 1412 aa28.39■■■□□ 2.14
PNKP-224ENST00000631020 MROH1Q8NDA8 1641 aa28.38■■■□□ 2.13
PNKP-224ENST00000631020 KIF15Q9NS87 1388 aa28.38■■■□□ 2.13
PNKP-224ENST00000631020 A2ML1A8K2U0 1454 aa28.37■■■□□ 2.13
PNKP-224ENST00000631020 ABCC3O15438 1527 aa28.37■■■□□ 2.13
PNKP-224ENST00000631020 TNRQ92752 1358 aa28.35■■■□□ 2.13
PNKP-224ENST00000631020 PRDM15P57071 1507 aaPredicted RBP28.32■■■□□ 2.12
PNKP-224ENST00000631020 ITGAEP38570 1179 aa28.32■■■□□ 2.12
PNKP-224ENST00000631020 ANKRD30AQ9BXX3 1397 aa28.31■■■□□ 2.12
PNKP-224ENST00000631020 FBXO31Q5XUX0 539 aaPredicted RBP28.31■■■□□ 2.12
PNKP-224ENST00000631020 CERKQ8TCT0 537 aa28.31■■■□□ 2.12
PNKP-224ENST00000631020 PKD2Q13563 968 aa28.3■■■□□ 2.12
PNKP-224ENST00000631020 DEPDC5O75140 1603 aa28.3■■■□□ 2.12
PNKP-224ENST00000631020 NLRP1Q9C000 1473 aa28.29■■■□□ 2.12
PNKP-224ENST00000631020 CHIC2Q9UKJ5 165 aa28.29■■■□□ 2.12
PNKP-224ENST00000631020 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
PNKP-224ENST00000631020 CEP152O94986 1710 aa28.28■■■□□ 2.12
PNKP-224ENST00000631020 RRP7BPQ9NSQ0 103 aa28.28■■■□□ 2.12
PNKP-224ENST00000631020 SPATA31D1Q6ZQQ2 1576 aa28.28■■■□□ 2.12
PNKP-224ENST00000631020 ARHGAP31Q2M1Z3 1444 aa28.22■■■□□ 2.11
PNKP-224ENST00000631020 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
PNKP-224ENST00000631020 ERVK-7P63135 1459 aa28.22■■■□□ 2.11
PNKP-224ENST00000631020 LTBP4Q8N2S1 1624 aa28.21■■■□□ 2.11
PNKP-224ENST00000631020 POLR1AO95602 1720 aaPredicted RBP28.2■■■□□ 2.11
PNKP-224ENST00000631020 UGGT1Q9NYU2 1555 aa28.19■■■□□ 2.1
PNKP-224ENST00000631020 KANK1Q14678 1352 aa28.18■■■□□ 2.1
PNKP-224ENST00000631020 VWDEQ8N2E2 1590 aa28.18■■■□□ 2.1
PNKP-224ENST00000631020 THEMISQ8N1K5 641 aaPredicted RBP28.17■■■□□ 2.1
PNKP-224ENST00000631020 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
PNKP-224ENST00000631020 IQSEC2Q5JU85 1478 aa28.15■■■□□ 2.1
PNKP-224ENST00000631020 CFAP65Q6ZU64 1925 aaKnown RBP28.14■■■□□ 2.09
PNKP-224ENST00000631020 ROCK1Q13464 1354 aa28.13■■■□□ 2.09
PNKP-224ENST00000631020 NEURL4Q96JN8 1562 aa28.13■■■□□ 2.09
PNKP-224ENST00000631020 ANKRD50Q9ULJ7 1429 aa28.1■■■□□ 2.09
PNKP-224ENST00000631020 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
PNKP-224ENST00000631020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.1■■■□□ 2.091e-7■■■■□ 24.4
PNKP-224ENST00000631020 ANKLE2Q86XL3 938 aa28.08■■■□□ 2.09
PNKP-224ENST00000631020 MED14O60244 1454 aa28.08■■■□□ 2.09
PNKP-224ENST00000631020 UBR1Q8IWV7 1749 aa28.07■■■□□ 2.08
PNKP-224ENST00000631020 EFCAB6Q5THR3 1501 aa28.05■■■□□ 2.08
PNKP-224ENST00000631020 ZNF335Q9H4Z2 1342 aaPredicted RBP28.05■■■□□ 2.08
PNKP-224ENST00000631020 KDM5AP29375 1690 aaKnown RBP28.02■■■□□ 2.08
PNKP-224ENST00000631020 UNC13BO14795 1591 aa28■■■□□ 2.07
PNKP-224ENST00000631020 NAIPQ13075 1403 aa28■■■□□ 2.07
PNKP-224ENST00000631020 RPRD2Q5VT52 1461 aaKnown RBP28■■■□□ 2.07
PNKP-224ENST00000631020 NPHP4O75161 1426 aaPredicted RBP27.99■■■□□ 2.07
PNKP-224ENST00000631020 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
PNKP-224ENST00000631020 HFM1A2PYH4 1435 aa27.98■■■□□ 2.07
PNKP-224ENST00000631020 SLIT1O75093 1534 aa27.98■■■□□ 2.07
PNKP-224ENST00000631020 TET3O43151 1660 aa27.97■■■□□ 2.07
PNKP-224ENST00000631020 NOS1P29475 1434 aa27.97■■■□□ 2.07
PNKP-224ENST00000631020 ARHGAP23Q9P227 1491 aa27.97■■■□□ 2.07
PNKP-224ENST00000631020 PIK3C2BO00750 1634 aa27.96■■■□□ 2.07
PNKP-224ENST00000631020 CPS1P31327 1500 aa27.95■■■□□ 2.06
PNKP-224ENST00000631020 SYNMO15061 1565 aa27.95■■■□□ 2.06
PNKP-224ENST00000631020 GCC2Q8IWJ2 1684 aa27.94■■■□□ 2.06
PNKP-224ENST00000631020 SCAF11Q99590 1463 aaKnown RBP27.93■■■□□ 2.06
PNKP-224ENST00000631020 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.05
PNKP-224ENST00000631020 SLC52A1Q9NWF4 448 aa27.88■■■□□ 2.05
PNKP-224ENST00000631020 IDI1Q13907 227 aa27.87■■■□□ 2.05
PNKP-224ENST00000631020 SETD5Q9C0A6 1442 aa27.87■■■□□ 2.05
PNKP-224ENST00000631020 TMEM2Q9UHN6 1383 aa27.87■■■□□ 2.05
PNKP-224ENST00000631020 ADGRB3O60242 1522 aa27.85■■■□□ 2.05
PNKP-224ENST00000631020 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
PNKP-224ENST00000631020 EID1Q9Y6B2 187 aa27.84■■■□□ 2.05
PNKP-224ENST00000631020 LTKP29376 864 aa27.83■■■□□ 2.05
PNKP-224ENST00000631020 TXNDC2Q86VQ3 553 aa27.83■■■□□ 2.05
PNKP-224ENST00000631020 PCGF6Q9BYE7 350 aa27.82■■■□□ 2.04
PNKP-224ENST00000631020 E9PCH4 1651 aa27.82■■■□□ 2.04
PNKP-224ENST00000631020 RAB3GAP2Q9H2M9 1393 aa27.8■■■□□ 2.04
PNKP-224ENST00000631020 NUP155O75694 1391 aa27.78■■■□□ 2.04
PNKP-224ENST00000631020 STRCP1A6NGW2 1772 aa27.78■■■□□ 2.04
PNKP-224ENST00000631020 UBAP1LF5GYI3 381 aa27.77■■■□□ 2.04
PNKP-224ENST00000631020 TMEM131LA2VDJ0 1609 aa27.73■■■□□ 2.03
PNKP-224ENST00000631020 HRCP23327 699 aa27.72■■■□□ 2.03
PNKP-224ENST00000631020 TRIM52Q96A61 297 aa27.72■■■□□ 2.03
PNKP-224ENST00000631020 MYO5BQ9ULV0 1848 aa27.72■■■□□ 2.03
PNKP-224ENST00000631020 LRRC7Q96NW7 1537 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms