RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-231	ENST00000629717	C9orf84	Q5VXU9	1444 aa		13.95	□□□□□ -0.18
NRXN1-231	ENST00000629717	BCORL1	Q5H9F3	1711 aa		13.95	□□□□□ -0.18
NRXN1-231	ENST00000629717	PTPRM	P28827	1452 aa		13.94	□□□□□ -0.18
NRXN1-231	ENST00000629717	KIAA1107	Q9UPP5	1409 aa		13.94	□□□□□ -0.18
NRXN1-231	ENST00000629717	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
NRXN1-231	ENST00000629717	PLEKHH2	Q8IVE3	1493 aa		13.93	□□□□□ -0.18
NRXN1-231	ENST00000629717	MLEC	Q14165	292 aa		13.92	□□□□□ -0.18
NRXN1-231	ENST00000629717	TIAM1	Q13009	1591 aa		13.92	□□□□□ -0.18
NRXN1-231	ENST00000629717	SAMD9L	Q8IVG5	1584 aa		13.92	□□□□□ -0.18
NRXN1-231	ENST00000629717	HECW2	Q9P2P5	1572 aa		13.92	□□□□□ -0.18
NRXN1-231	ENST00000629717	SPAG9	O60271	1321 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	ZNF644	Q9H582	1327 aa	Predicted RBP	13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	SYCP2	Q9BX26	1530 aa		13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	MADD	Q8WXG6	1647 aa		13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	NCOA2	Q15596	1464 aa		13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	ITSN2	Q9NZM3	1697 aa		13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	SIGLEC1	Q9BZZ2	1709 aa		13.9	□□□□□ -0.18
NRXN1-231	ENST00000629717	MAP3K1	Q13233	1512 aa		13.9	□□□□□ -0.19
NRXN1-231	ENST00000629717	DIP2C	Q9Y2E4	1556 aa		13.89	□□□□□ -0.19
NRXN1-231	ENST00000629717	LRRC9	Q6ZRR7	1453 aa		13.89	□□□□□ -0.19
NRXN1-231	ENST00000629717	MNX1	P50219	401 aa	Predicted RBP	13.89	□□□□□ -0.19
NRXN1-231	ENST00000629717	PLCB2	Q00722	1185 aa		13.88	□□□□□ -0.19
NRXN1-231	ENST00000629717	RERE	Q9P2R6	1566 aa		13.88	□□□□□ -0.19
NRXN1-231	ENST00000629717	KANK4	Q5T7N3	995 aa	Predicted RBP	13.87	□□□□□ -0.19
NRXN1-231	ENST00000629717	ABCA6	Q8N139	1617 aa		13.86	□□□□□ -0.19
NRXN1-231	ENST00000629717	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.86	□□□□□ -0.19
NRXN1-231	ENST00000629717	MBD5	Q9P267	1494 aa		13.86	□□□□□ -0.19
NRXN1-231	ENST00000629717	AGL	P35573	1532 aa		13.85	□□□□□ -0.19
NRXN1-231	ENST00000629717	KIDINS220	Q9ULH0	1771 aa		13.84	□□□□□ -0.19
NRXN1-231	ENST00000629717	RSPH4A	Q5TD94	716 aa		13.84	□□□□□ -0.19
NRXN1-231	ENST00000629717	RIMS1	Q86UR5	1692 aa	Known RBP	13.83	□□□□□ -0.2
NRXN1-231	ENST00000629717	CD44	P16070	742 aa	Known RBP	13.83	□□□□□ -0.2
NRXN1-231	ENST00000629717	ATP7A	Q04656	1500 aa		13.82	□□□□□ -0.2
NRXN1-231	ENST00000629717	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.81	□□□□□ -0.2
NRXN1-231	ENST00000629717	CAMSAP2	Q08AD1	1489 aa		13.8	□□□□□ -0.2
NRXN1-231	ENST00000629717	INO80	Q9ULG1	1556 aa	Predicted RBP	13.8	□□□□□ -0.2
NRXN1-231	ENST00000629717	MIER1	Q8N108	512 aa		13.8	□□□□□ -0.2
NRXN1-231	ENST00000629717	ESF1	Q9H501	851 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-231	ENST00000629717	FER1L4	A9Z1Z3	1794 aa		13.79	□□□□□ -0.2
NRXN1-231	ENST00000629717	CEBPA	P49715	358 aa	Predicted RBP	13.79	□□□□□ -0.2
NRXN1-231	ENST00000629717	A2M	P01023	1474 aa		13.79	□□□□□ -0.2
NRXN1-231	ENST00000629717	CCDC141	Q6ZP82	1450 aa		13.79	□□□□□ -0.2
NRXN1-231	ENST00000629717	MYOM3	Q5VTT5	1437 aa		13.78	□□□□□ -0.2
NRXN1-231	ENST00000629717	MIA2	Q96PC5	1412 aa		13.78	□□□□□ -0.2
NRXN1-231	ENST00000629717	LMTK3	Q96Q04	1460 aa		13.78	□□□□□ -0.2
NRXN1-231	ENST00000629717	TSPY4	P0CV99	314 aa		13.77	□□□□□ -0.21
NRXN1-231	ENST00000629717	TSPY10	P0CW01	314 aa		13.77	□□□□□ -0.21
NRXN1-231	ENST00000629717	FBXO3	Q9UK99	471 aa		13.77	□□□□□ -0.21
NRXN1-231	ENST00000629717	PLXNC1	O60486	1568 aa		13.76	□□□□□ -0.21
NRXN1-231	ENST00000629717	CNTLN	Q9NXG0	1405 aa		13.76	□□□□□ -0.21
NRXN1-231	ENST00000629717	DHX29	Q7Z478	1369 aa	Known RBP	13.75	□□□□□ -0.21
NRXN1-231	ENST00000629717	ARHGEF5	Q12774	1597 aa		13.75	□□□□□ -0.21
NRXN1-231	ENST00000629717	PLEKHG5	O94827	1062 aa		13.74	□□□□□ -0.21
NRXN1-231	ENST00000629717	GGT6	Q6P531	493 aa		13.73	□□□□□ -0.21
NRXN1-231	ENST00000629717	PLCD3	Q8N3E9	789 aa		13.73	□□□□□ -0.21
NRXN1-231	ENST00000629717	HSPA2	P54652	639 aa		13.72	□□□□□ -0.21
NRXN1-231	ENST00000629717	ADGB	Q8N7X0	1667 aa		13.72	□□□□□ -0.21
NRXN1-231	ENST00000629717	ZMYM3	Q14202	1370 aa		13.71	□□□□□ -0.22
NRXN1-231	ENST00000629717	KIF3B	O15066	747 aa		13.7	□□□□□ -0.22
NRXN1-231	ENST00000629717	PRKCSH	P14314	528 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-231	ENST00000629717	ZRANB1	Q9UGI0	708 aa		13.69	□□□□□ -0.22
NRXN1-231	ENST00000629717	UHRF1BP1	Q6BDS2	1440 aa		13.68	□□□□□ -0.22
NRXN1-231	ENST00000629717	FGD6	Q6ZV73	1430 aa		13.68	□□□□□ -0.22
NRXN1-231	ENST00000629717	GABBR2	O75899	941 aa		13.68	□□□□□ -0.22
NRXN1-231	ENST00000629717	NPAT	Q14207	1427 aa		13.67	□□□□□ -0.22
NRXN1-231	ENST00000629717	C3	P01024	1663 aa		13.67	□□□□□ -0.22
NRXN1-231	ENST00000629717	MAST1	Q9Y2H9	1570 aa		13.66	□□□□□ -0.22
NRXN1-231	ENST00000629717	ZNF579	Q8NAF0	562 aa	Known RBP	13.66	□□□□□ -0.22
NRXN1-231	ENST00000629717	PREX1	Q8TCU6	1659 aa		13.66	□□□□□ -0.22
NRXN1-231	ENST00000629717	SETD1B	Q9UPS6	1966 aa	Known RBP	13.65	□□□□□ -0.22
NRXN1-231	ENST00000629717	ABCC5	O15440	1437 aa		13.65	□□□□□ -0.22
NRXN1-231	ENST00000629717	TCOF1	Q13428	1488 aa	Known RBP	13.65	□□□□□ -0.22
NRXN1-231	ENST00000629717	MROH2A	A6NES4	1674 aa		13.65	□□□□□ -0.22
NRXN1-231	ENST00000629717	PTPN23	Q9H3S7	1636 aa		13.64	□□□□□ -0.23
NRXN1-231	ENST00000629717	PAK3	O75914	559 aa	Predicted RBP	13.64	□□□□□ -0.23
NRXN1-231	ENST00000629717	HAP1	P54257	671 aa	Predicted RBP	13.64	□□□□□ -0.23
NRXN1-231	ENST00000629717	WASHC2C	Q9Y4E1	1318 aa		13.64	□□□□□ -0.23
NRXN1-231	ENST00000629717	SHANK2	Q9UPX8	1470 aa		13.63	□□□□□ -0.23
NRXN1-231	ENST00000629717	PTPRK	Q15262	1439 aa		13.63	□□□□□ -0.23
NRXN1-231	ENST00000629717	CLTC	Q00610	1675 aa	Known RBP	13.63	□□□□□ -0.23
NRXN1-231	ENST00000629717	FAM135A	Q9P2D6	1515 aa		13.62	□□□□□ -0.23
NRXN1-231	ENST00000629717	DAPK1	P53355	1430 aa		13.62	□□□□□ -0.23
NRXN1-231	ENST00000629717	KIF15	Q9NS87	1388 aa		13.61	□□□□□ -0.23
NRXN1-231	ENST00000629717	RRP7BP	Q9NSQ0	103 aa		13.61	□□□□□ -0.23
NRXN1-231	ENST00000629717	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.61	□□□□□ -0.23
NRXN1-231	ENST00000629717	DUOX2	Q9NRD8	1548 aa		13.6	□□□□□ -0.23
NRXN1-231	ENST00000629717	VASP	P50552	380 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-231	ENST00000629717	CLCN6	P51797	869 aa		13.6	□□□□□ -0.23
NRXN1-231	ENST00000629717	FAM50A	Q14320	339 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-231	ENST00000629717	KDM5D	Q9BY66	1539 aa		13.59	□□□□□ -0.23
NRXN1-231	ENST00000629717	CHIC2	Q9UKJ5	165 aa		13.59	□□□□□ -0.23
NRXN1-231	ENST00000629717	DNMT1	P26358	1616 aa	Known RBP	13.58	□□□□□ -0.24
NRXN1-231	ENST00000629717	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.58	□□□□□ -0.24
NRXN1-231	ENST00000629717	ANKRD30A	Q9BXX3	1397 aa		13.58	□□□□□ -0.24
NRXN1-231	ENST00000629717	PZP	P20742	1482 aa		13.57	□□□□□ -0.24
NRXN1-231	ENST00000629717	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.57	□□□□□ -0.24
NRXN1-231	ENST00000629717	RNF17	Q9BXT8	1623 aa	Known RBP	13.57	□□□□□ -0.24
NRXN1-231	ENST00000629717	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.57	□□□□□ -0.24
NRXN1-231	ENST00000629717	NCOA1	Q15788	1441 aa		13.56	□□□□□ -0.24
NRXN1-231	ENST00000629717	ERBIN	Q96RT1	1412 aa		13.56	□□□□□ -0.24

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