RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 PREX1Q8TCU6 1659 aa31.73■■■□□ 2.67
CIRBP-246ENST00000628979 SETD1BQ9UPS6 1966 aaKnown RBP31.72■■■□□ 2.67
CIRBP-246ENST00000628979 WASHC2CQ9Y4E1 1318 aa31.72■■■□□ 2.67
CIRBP-246ENST00000628979 ANKRD30AQ9BXX3 1397 aa31.7■■■□□ 2.67
CIRBP-246ENST00000628979 UHRF1BP1Q6BDS2 1440 aa31.68■■■□□ 2.66
CIRBP-246ENST00000628979 EIF2AK4Q9P2K8 1649 aaKnown RBP31.67■■■□□ 2.66
CIRBP-246ENST00000628979 ITGAEP38570 1179 aa31.66■■■□□ 2.66
CIRBP-246ENST00000628979 KDM5DQ9BY66 1539 aa31.65■■■□□ 2.66
CIRBP-246ENST00000628979 RNF17Q9BXT8 1623 aaKnown RBP31.64■■■□□ 2.66
CIRBP-246ENST00000628979 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
CIRBP-246ENST00000628979 NPATQ14207 1427 aa31.62■■■□□ 2.65
CIRBP-246ENST00000628979 ERBINQ96RT1 1412 aa31.62■■■□□ 2.65
CIRBP-246ENST00000628979 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
CIRBP-246ENST00000628979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.61■■■□□ 2.65
CIRBP-246ENST00000628979 FAM135AQ9P2D6 1515 aa31.59■■■□□ 2.65
CIRBP-246ENST00000628979 ADGRL2O95490 1459 aa31.59■■■□□ 2.65
CIRBP-246ENST00000628979 FBXO31Q5XUX0 539 aaPredicted RBP31.57■■■□□ 2.64
CIRBP-246ENST00000628979 MROH1Q8NDA8 1641 aa31.56■■■□□ 2.64
CIRBP-246ENST00000628979 ABCC3O15438 1527 aa31.54■■■□□ 2.64
CIRBP-246ENST00000628979 CEP152O94986 1710 aa31.53■■■□□ 2.64
CIRBP-246ENST00000628979 PZPP20742 1482 aa31.52■■■□□ 2.64
CIRBP-246ENST00000628979 ZC3H13Q5T200 1668 aaKnown RBP31.51■■■□□ 2.64
CIRBP-246ENST00000628979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.51■■■□□ 2.635e-6■■■□□ 18.7
CIRBP-246ENST00000628979 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
CIRBP-246ENST00000628979 KANK1Q14678 1352 aa31.48■■■□□ 2.63
CIRBP-246ENST00000628979 ANKRD50Q9ULJ7 1429 aa31.48■■■□□ 2.63
CIRBP-246ENST00000628979 TNRQ92752 1358 aa31.47■■■□□ 2.63
CIRBP-246ENST00000628979 PRDM15P57071 1507 aaPredicted RBP31.47■■■□□ 2.63
CIRBP-246ENST00000628979 RRBP1Q9P2E9 1410 aaKnown RBP31.47■■■□□ 2.63
CIRBP-246ENST00000628979 DEPDC5O75140 1603 aa31.46■■■□□ 2.63
CIRBP-246ENST00000628979 CFAP65Q6ZU64 1925 aaKnown RBP31.45■■■□□ 2.62
CIRBP-246ENST00000628979 CAMSAP1Q5T5Y3 1602 aa31.44■■■□□ 2.62
CIRBP-246ENST00000628979 ROCK1Q13464 1354 aa31.43■■■□□ 2.62
CIRBP-246ENST00000628979 CEP170BQ9Y4F5 1589 aaPredicted RBP31.41■■■□□ 2.62
CIRBP-246ENST00000628979 STRCQ7RTU9 1775 aa31.4■■■□□ 2.62
CIRBP-246ENST00000628979 ZNF142P52746 1687 aaPredicted RBP31.39■■■□□ 2.62
CIRBP-246ENST00000628979 A2ML1A8K2U0 1454 aa31.36■■■□□ 2.61
CIRBP-246ENST00000628979 ERVK-7P63135 1459 aa31.34■■■□□ 2.61
CIRBP-246ENST00000628979 DMRT2Q9Y5R5 561 aa31.34■■■□□ 2.61
CIRBP-246ENST00000628979 SPATA31D1Q6ZQQ2 1576 aa31.32■■■□□ 2.6
CIRBP-246ENST00000628979 VWDEQ8N2E2 1590 aa31.32■■■□□ 2.6
CIRBP-246ENST00000628979 NCKAP5LQ9HCH0 1330 aa31.31■■■□□ 2.6
CIRBP-246ENST00000628979 ARHGAP31Q2M1Z3 1444 aa31.31■■■□□ 2.6
CIRBP-246ENST00000628979 LMTK2Q8IWU2 1503 aa31.29■■■□□ 2.6
CIRBP-246ENST00000628979 NLRP1Q9C000 1473 aa31.28■■■□□ 2.6
CIRBP-246ENST00000628979 UNC13BO14795 1591 aa31.25■■■□□ 2.59
CIRBP-246ENST00000628979 UGGT1Q9NYU2 1555 aa31.23■■■□□ 2.59
CIRBP-246ENST00000628979 THEMISQ8N1K5 641 aaPredicted RBP31.23■■■□□ 2.59
CIRBP-246ENST00000628979 PLA2R1Q13018 1463 aa31.22■■■□□ 2.59
CIRBP-246ENST00000628979 EFCAB6Q5THR3 1501 aa31.22■■■□□ 2.59
CIRBP-246ENST00000628979 PKD2Q13563 968 aa31.21■■■□□ 2.59
CIRBP-246ENST00000628979 PTPRTO14522 1441 aa31.21■■■□□ 2.59
CIRBP-246ENST00000628979 NUP155O75694 1391 aa31.2■■■□□ 2.59
CIRBP-246ENST00000628979 TET3O43151 1660 aa31.17■■■□□ 2.58
CIRBP-246ENST00000628979 NAIPQ13075 1403 aa31.15■■■□□ 2.58
CIRBP-246ENST00000628979 ANKLE2Q86XL3 938 aa31.14■■■□□ 2.58
CIRBP-246ENST00000628979 IQGAP3Q86VI3 1631 aa31.13■■■□□ 2.57
CIRBP-246ENST00000628979 GCC2Q8IWJ2 1684 aa31.13■■■□□ 2.57
CIRBP-246ENST00000628979 STAG3Q9UJ98 1225 aa31.13■■■□□ 2.57
CIRBP-246ENST00000628979 UBR1Q8IWV7 1749 aa31.11■■■□□ 2.57
CIRBP-246ENST00000628979 POLR1AO95602 1720 aaPredicted RBP31.1■■■□□ 2.57
CIRBP-246ENST00000628979 SYNMO15061 1565 aa31.1■■■□□ 2.57
CIRBP-246ENST00000628979 NOS1P29475 1434 aa31.1■■■□□ 2.57
CIRBP-246ENST00000628979 IDI1Q13907 227 aa31.1■■■□□ 2.57
CIRBP-246ENST00000628979 PIK3C2BO00750 1634 aa31.09■■■□□ 2.57
CIRBP-246ENST00000628979 RPRD2Q5VT52 1461 aaKnown RBP31.09■■■□□ 2.57
CIRBP-246ENST00000628979 HFM1A2PYH4 1435 aa31.07■■■□□ 2.57
CIRBP-246ENST00000628979 E9PCH4 1651 aa31.07■■■□□ 2.56
CIRBP-246ENST00000628979 TRIM52Q96A61 297 aa31.06■■■□□ 2.56
CIRBP-246ENST00000628979 CERKQ8TCT0 537 aa31.05■■■□□ 2.56
CIRBP-246ENST00000628979 ILDR1Q86SU0 546 aaPredicted RBP31.04■■■□□ 2.56
CIRBP-246ENST00000628979 SLC52A1Q9NWF4 448 aa31.04■■■□□ 2.56
CIRBP-246ENST00000628979 NEURL4Q96JN8 1562 aa31.03■■■□□ 2.56
CIRBP-246ENST00000628979 TXNDC2Q86VQ3 553 aa30.99■■■□□ 2.55
CIRBP-246ENST00000628979 ZNF335Q9H4Z2 1342 aaPredicted RBP30.98■■■□□ 2.55
CIRBP-246ENST00000628979 NPHP4O75161 1426 aaPredicted RBP30.98■■■□□ 2.55
CIRBP-246ENST00000628979 CHGAP10645 457 aaKnown RBP30.97■■■□□ 2.55
CIRBP-246ENST00000628979 LTKP29376 864 aa30.96■■■□□ 2.55
CIRBP-246ENST00000628979 EID1Q9Y6B2 187 aa30.96■■■□□ 2.55
CIRBP-246ENST00000628979 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
CIRBP-246ENST00000628979 ADGRB3O60242 1522 aa30.93■■■□□ 2.54
CIRBP-246ENST00000628979 SLIT1O75093 1534 aa30.93■■■□□ 2.54
CIRBP-246ENST00000628979 TMEM2Q9UHN6 1383 aa30.93■■■□□ 2.54
CIRBP-246ENST00000628979 FBXO41Q8TF61 875 aa30.93■■■□□ 2.54
CIRBP-246ENST00000628979 MED14O60244 1454 aa30.93■■■□□ 2.54
CIRBP-246ENST00000628979 SCAF11Q99590 1463 aaKnown RBP30.93■■■□□ 2.54
CIRBP-246ENST00000628979 KDM5AP29375 1690 aaKnown RBP30.93■■■□□ 2.54
CIRBP-246ENST00000628979 LTBP4Q8N2S1 1624 aa30.92■■■□□ 2.54
CIRBP-246ENST00000628979 IQGAP1P46940 1657 aa30.92■■■□□ 2.54
CIRBP-246ENST00000628979 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.54
CIRBP-246ENST00000628979 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
CIRBP-246ENST00000628979 SPHKAPQ2M3C7 1700 aa30.86■■■□□ 2.53
CIRBP-246ENST00000628979 TMEM131LA2VDJ0 1609 aa30.84■■■□□ 2.53
CIRBP-246ENST00000628979 SENP3Q9H4L4 574 aaPredicted RBP30.84■■■□□ 2.53
CIRBP-246ENST00000628979 SETD5Q9C0A6 1442 aa30.82■■■□□ 2.52
CIRBP-246ENST00000628979 BCANQ96GW7 911 aa30.82■■■□□ 2.52
CIRBP-246ENST00000628979 PPP1R15AO75807 674 aaPredicted RBP30.79■■■□□ 2.52
CIRBP-246ENST00000628979 RIMS2Q9UQ26 1411 aa30.79■■■□□ 2.52
CIRBP-246ENST00000628979 HDGFP51858 240 aaKnown RBP30.78■■■□□ 2.52
CIRBP-246ENST00000628979 NUTM2DQ5VT03 806 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms