RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
TMCO1-209ENST00000628579 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
TMCO1-209ENST00000628579 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.2
TMCO1-209ENST00000628579 RNF17Q9BXT8 1623 aaKnown RBP16.33■□□□□ 0.2
TMCO1-209ENST00000628579 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
TMCO1-209ENST00000628579 DUOX2Q9NRD8 1548 aa16.31■□□□□ 0.2
TMCO1-209ENST00000628579 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
TMCO1-209ENST00000628579 KIF15Q9NS87 1388 aa16.31■□□□□ 0.2
TMCO1-209ENST00000628579 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
TMCO1-209ENST00000628579 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
TMCO1-209ENST00000628579 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
TMCO1-209ENST00000628579 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
TMCO1-209ENST00000628579 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
TMCO1-209ENST00000628579 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
TMCO1-209ENST00000628579 PZPP20742 1482 aa16.29■□□□□ 0.2
TMCO1-209ENST00000628579 CAMSAP1Q5T5Y3 1602 aa16.28■□□□□ 0.2
TMCO1-209ENST00000628579 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
TMCO1-209ENST00000628579 ABCC3O15438 1527 aa16.28■□□□□ 0.2
TMCO1-209ENST00000628579 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
TMCO1-209ENST00000628579 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
TMCO1-209ENST00000628579 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
TMCO1-209ENST00000628579 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
TMCO1-209ENST00000628579 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
TMCO1-209ENST00000628579 CEP152O94986 1710 aa16.25■□□□□ 0.19
TMCO1-209ENST00000628579 TNRQ92752 1358 aa16.25■□□□□ 0.19
TMCO1-209ENST00000628579 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
TMCO1-209ENST00000628579 A2ML1A8K2U0 1454 aa16.23■□□□□ 0.19
TMCO1-209ENST00000628579 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
TMCO1-209ENST00000628579 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
TMCO1-209ENST00000628579 PTPRTO14522 1441 aa16.22■□□□□ 0.19
TMCO1-209ENST00000628579 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
TMCO1-209ENST00000628579 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
TMCO1-209ENST00000628579 DEPDC5O75140 1603 aa16.21■□□□□ 0.19
TMCO1-209ENST00000628579 PLA2R1Q13018 1463 aa16.21■□□□□ 0.19
TMCO1-209ENST00000628579 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
TMCO1-209ENST00000628579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.181e-6■■■■□ 19.8
TMCO1-209ENST00000628579 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
TMCO1-209ENST00000628579 ERVK-7P63135 1459 aa16.18■□□□□ 0.18
TMCO1-209ENST00000628579 CERKQ8TCT0 537 aa16.18■□□□□ 0.18
TMCO1-209ENST00000628579 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
TMCO1-209ENST00000628579 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
TMCO1-209ENST00000628579 PKD2Q13563 968 aa16.15■□□□□ 0.18
TMCO1-209ENST00000628579 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
TMCO1-209ENST00000628579 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.17
TMCO1-209ENST00000628579 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
TMCO1-209ENST00000628579 KANK1Q14678 1352 aa16.13■□□□□ 0.17
TMCO1-209ENST00000628579 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
TMCO1-209ENST00000628579 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
TMCO1-209ENST00000628579 LTBP4Q8N2S1 1624 aa16.13■□□□□ 0.17
TMCO1-209ENST00000628579 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
TMCO1-209ENST00000628579 POLR1AO95602 1720 aaPredicted RBP16.12■□□□□ 0.17
TMCO1-209ENST00000628579 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
TMCO1-209ENST00000628579 ITGAEP38570 1179 aa16.11■□□□□ 0.17
TMCO1-209ENST00000628579 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
TMCO1-209ENST00000628579 ZNF335Q9H4Z2 1342 aaPredicted RBP16.1■□□□□ 0.17
TMCO1-209ENST00000628579 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
TMCO1-209ENST00000628579 EFCAB6Q5THR3 1501 aa16.09■□□□□ 0.17
TMCO1-209ENST00000628579 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.17
TMCO1-209ENST00000628579 UNC13BO14795 1591 aa16.06■□□□□ 0.16
TMCO1-209ENST00000628579 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
TMCO1-209ENST00000628579 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
TMCO1-209ENST00000628579 SYNMO15061 1565 aa16.05■□□□□ 0.16
TMCO1-209ENST00000628579 RRBP1Q9P2E9 1410 aaKnown RBP16.05■□□□□ 0.16
TMCO1-209ENST00000628579 MED14O60244 1454 aa16.03■□□□□ 0.16
TMCO1-209ENST00000628579 NPHP4O75161 1426 aaPredicted RBP16.03■□□□□ 0.16
TMCO1-209ENST00000628579 TET3O43151 1660 aa16.03■□□□□ 0.16
TMCO1-209ENST00000628579 NOS1P29475 1434 aa16.02■□□□□ 0.16
TMCO1-209ENST00000628579 IQGAP1P46940 1657 aa16.02■□□□□ 0.16
TMCO1-209ENST00000628579 IDI1Q13907 227 aa16.01■□□□□ 0.15
TMCO1-209ENST00000628579 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
TMCO1-209ENST00000628579 SLIT1O75093 1534 aa16■□□□□ 0.15
TMCO1-209ENST00000628579 GCC2Q8IWJ2 1684 aa16■□□□□ 0.15
TMCO1-209ENST00000628579 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
TMCO1-209ENST00000628579 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
TMCO1-209ENST00000628579 SCAF11Q99590 1463 aaKnown RBP15.99■□□□□ 0.15
TMCO1-209ENST00000628579 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
TMCO1-209ENST00000628579 LTKP29376 864 aa15.99■□□□□ 0.15
TMCO1-209ENST00000628579 E9PCH4 1651 aa15.99■□□□□ 0.15
TMCO1-209ENST00000628579 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
TMCO1-209ENST00000628579 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
TMCO1-209ENST00000628579 NUP155O75694 1391 aa15.97■□□□□ 0.15
TMCO1-209ENST00000628579 TMEM2Q9UHN6 1383 aa15.97■□□□□ 0.15
TMCO1-209ENST00000628579 ADGRB3O60242 1522 aa15.96■□□□□ 0.15
TMCO1-209ENST00000628579 TXNDC2Q86VQ3 553 aa15.96■□□□□ 0.15
TMCO1-209ENST00000628579 CPS1P31327 1500 aa15.94■□□□□ 0.14
TMCO1-209ENST00000628579 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
TMCO1-209ENST00000628579 STRCP1A6NGW2 1772 aa15.94■□□□□ 0.14
TMCO1-209ENST00000628579 NAIPQ13075 1403 aa15.94■□□□□ 0.14
TMCO1-209ENST00000628579 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
TMCO1-209ENST00000628579 MYO5BQ9ULV0 1848 aa15.93■□□□□ 0.14
TMCO1-209ENST00000628579 TMEM131LA2VDJ0 1609 aa15.9■□□□□ 0.14
TMCO1-209ENST00000628579 UBAP1LF5GYI3 381 aa15.9■□□□□ 0.14
TMCO1-209ENST00000628579 HFM1A2PYH4 1435 aa15.89■□□□□ 0.13
TMCO1-209ENST00000628579 ZFYVE9O95405 1425 aa15.88■□□□□ 0.13
TMCO1-209ENST00000628579 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
TMCO1-209ENST00000628579 LRRC7Q96NW7 1537 aa15.87■□□□□ 0.13
TMCO1-209ENST00000628579 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
TMCO1-209ENST00000628579 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
TMCO1-209ENST00000628579 RIMS2Q9UQ26 1411 aa15.85■□□□□ 0.13
TMCO1-209ENST00000628579 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms