RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
NR1I3-235ENST00000628566 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
NR1I3-235ENST00000628566 ITGAEP38570 1179 aa11.82□□□□□ -0.52
NR1I3-235ENST00000628566 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
NR1I3-235ENST00000628566 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
NR1I3-235ENST00000628566 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
NR1I3-235ENST00000628566 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
NR1I3-235ENST00000628566 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
NR1I3-235ENST00000628566 KANK1Q14678 1352 aa11.8□□□□□ -0.52
NR1I3-235ENST00000628566 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
NR1I3-235ENST00000628566 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
NR1I3-235ENST00000628566 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
NR1I3-235ENST00000628566 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
NR1I3-235ENST00000628566 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
NR1I3-235ENST00000628566 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.52
NR1I3-235ENST00000628566 C3P01024 1663 aa11.76□□□□□ -0.53
NR1I3-235ENST00000628566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
NR1I3-235ENST00000628566 NPATQ14207 1427 aa11.75□□□□□ -0.53
NR1I3-235ENST00000628566 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-235ENST00000628566 PTPRKQ15262 1439 aa11.74□□□□□ -0.53
NR1I3-235ENST00000628566 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
NR1I3-235ENST00000628566 PRDM15P57071 1507 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-235ENST00000628566 PREX1Q8TCU6 1659 aa11.72□□□□□ -0.53
NR1I3-235ENST00000628566 DEPDC5O75140 1603 aa11.72□□□□□ -0.53
NR1I3-235ENST00000628566 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
NR1I3-235ENST00000628566 ABCC3O15438 1527 aa11.71□□□□□ -0.53
NR1I3-235ENST00000628566 PZPP20742 1482 aa11.71□□□□□ -0.53
NR1I3-235ENST00000628566 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
NR1I3-235ENST00000628566 MROH1Q8NDA8 1641 aa11.7□□□□□ -0.54
NR1I3-235ENST00000628566 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
NR1I3-235ENST00000628566 CEP152O94986 1710 aa11.69□□□□□ -0.54
NR1I3-235ENST00000628566 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
NR1I3-235ENST00000628566 GCC2Q8IWJ2 1684 aa11.68□□□□□ -0.54
NR1I3-235ENST00000628566 TNRQ92752 1358 aa11.68□□□□□ -0.54
NR1I3-235ENST00000628566 LMTK2Q8IWU2 1503 aa11.68□□□□□ -0.54
NR1I3-235ENST00000628566 LMTK3Q96Q04 1460 aa11.68□□□□□ -0.54
NR1I3-235ENST00000628566 ARHGAP31Q2M1Z3 1444 aa11.68□□□□□ -0.54
NR1I3-235ENST00000628566 UNC13BO14795 1591 aa11.67□□□□□ -0.54
NR1I3-235ENST00000628566 NAIPQ13075 1403 aa11.67□□□□□ -0.54
NR1I3-235ENST00000628566 NUP155O75694 1391 aa11.67□□□□□ -0.54
NR1I3-235ENST00000628566 VWDEQ8N2E2 1590 aa11.66□□□□□ -0.54
NR1I3-235ENST00000628566 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
NR1I3-235ENST00000628566 MYO3AQ8NEV4 1616 aa11.65□□□□□ -0.54
NR1I3-235ENST00000628566 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.55
NR1I3-235ENST00000628566 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
NR1I3-235ENST00000628566 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
NR1I3-235ENST00000628566 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-235ENST00000628566 TRIM52Q96A61 297 aa11.64□□□□□ -0.55
NR1I3-235ENST00000628566 TET3O43151 1660 aa11.64□□□□□ -0.55
NR1I3-235ENST00000628566 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
NR1I3-235ENST00000628566 ERVK-7P63135 1459 aa11.63□□□□□ -0.55
NR1I3-235ENST00000628566 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
NR1I3-235ENST00000628566 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
NR1I3-235ENST00000628566 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-235ENST00000628566 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-235ENST00000628566 HSPA2P54652 639 aa11.62□□□□□ -0.55
NR1I3-235ENST00000628566 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-235ENST00000628566 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
NR1I3-235ENST00000628566 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
NR1I3-235ENST00000628566 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
NR1I3-235ENST00000628566 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
NR1I3-235ENST00000628566 PKD2Q13563 968 aa11.59□□□□□ -0.55
NR1I3-235ENST00000628566 PLA2R1Q13018 1463 aa11.58□□□□□ -0.56
NR1I3-235ENST00000628566 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
NR1I3-235ENST00000628566 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
NR1I3-235ENST00000628566 NOS1P29475 1434 aa11.57□□□□□ -0.56
NR1I3-235ENST00000628566 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
NR1I3-235ENST00000628566 E9PCH4 1651 aa11.55□□□□□ -0.56
NR1I3-235ENST00000628566 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
NR1I3-235ENST00000628566 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
NR1I3-235ENST00000628566 KDM5AP29375 1690 aaKnown RBP11.55□□□□□ -0.56
NR1I3-235ENST00000628566 HRCP23327 699 aa11.54□□□□□ -0.56
NR1I3-235ENST00000628566 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
NR1I3-235ENST00000628566 IDI1Q13907 227 aa11.53□□□□□ -0.56
NR1I3-235ENST00000628566 SYNMO15061 1565 aa11.53□□□□□ -0.56
NR1I3-235ENST00000628566 PTPRTO14522 1441 aa11.52□□□□□ -0.56
NR1I3-235ENST00000628566 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.56
NR1I3-235ENST00000628566 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
NR1I3-235ENST00000628566 PIK3C2BO00750 1634 aa11.52□□□□□ -0.57
NR1I3-235ENST00000628566 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.57
NR1I3-235ENST00000628566 ADGRB3O60242 1522 aa11.51□□□□□ -0.57
NR1I3-235ENST00000628566 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-235ENST00000628566 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
NR1I3-235ENST00000628566 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
NR1I3-235ENST00000628566 POLR1AO95602 1720 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-235ENST00000628566 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
NR1I3-235ENST00000628566 TRPM2O94759 1503 aa11.5□□□□□ -0.57
NR1I3-235ENST00000628566 PPP1R15AO75807 674 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-235ENST00000628566 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
NR1I3-235ENST00000628566 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.49□□□□□ -0.57
NR1I3-235ENST00000628566 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
NR1I3-235ENST00000628566 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
NR1I3-235ENST00000628566 SLIT1O75093 1534 aa11.49□□□□□ -0.57
NR1I3-235ENST00000628566 MED14O60244 1454 aa11.47□□□□□ -0.57
NR1I3-235ENST00000628566 ARHGAP23Q9P227 1491 aa11.47□□□□□ -0.57
NR1I3-235ENST00000628566 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
NR1I3-235ENST00000628566 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-235ENST00000628566 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
NR1I3-235ENST00000628566 BCANQ96GW7 911 aa11.47□□□□□ -0.57
NR1I3-235ENST00000628566 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms