RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
FOXCUT-201ENST00000628509 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
FOXCUT-201ENST00000628509 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
FOXCUT-201ENST00000628509 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
FOXCUT-201ENST00000628509 KANK1Q14678 1352 aa14.8□□□□□ -0.04
FOXCUT-201ENST00000628509 PPRC1Q5VV67 1664 aaKnown RBP14.8□□□□□ -0.04
FOXCUT-201ENST00000628509 RICTORQ6R327 1708 aa14.8□□□□□ -0.04
FOXCUT-201ENST00000628509 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
FOXCUT-201ENST00000628509 DHX29Q7Z478 1369 aaKnown RBP14.78□□□□□ -0.04
FOXCUT-201ENST00000628509 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
FOXCUT-201ENST00000628509 TIMELESSQ9UNS1 1208 aa14.77□□□□□ -0.05
FOXCUT-201ENST00000628509 KIDINS220Q9ULH0 1771 aa14.77□□□□□ -0.05
FOXCUT-201ENST00000628509 A2MP01023 1474 aa14.76□□□□□ -0.05
FOXCUT-201ENST00000628509 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
FOXCUT-201ENST00000628509 NUP155O75694 1391 aa14.75□□□□□ -0.05
FOXCUT-201ENST00000628509 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
FOXCUT-201ENST00000628509 UNC13BO14795 1591 aa14.74□□□□□ -0.05
FOXCUT-201ENST00000628509 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
FOXCUT-201ENST00000628509 ATP10AO60312 1499 aa14.71□□□□□ -0.05
FOXCUT-201ENST00000628509 KIF3BO15066 747 aa14.71□□□□□ -0.05
FOXCUT-201ENST00000628509 BCORL1Q5H9F3 1711 aa14.71□□□□□ -0.05
FOXCUT-201ENST00000628509 KDM6BO15054 1643 aa14.7□□□□□ -0.06
FOXCUT-201ENST00000628509 REREQ9P2R6 1566 aa14.7□□□□□ -0.06
FOXCUT-201ENST00000628509 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
FOXCUT-201ENST00000628509 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
FOXCUT-201ENST00000628509 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
FOXCUT-201ENST00000628509 ABCA6Q8N139 1617 aa14.69□□□□□ -0.06
FOXCUT-201ENST00000628509 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
FOXCUT-201ENST00000628509 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
FOXCUT-201ENST00000628509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
FOXCUT-201ENST00000628509 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
FOXCUT-201ENST00000628509 AGLP35573 1532 aa14.66□□□□□ -0.06
FOXCUT-201ENST00000628509 PRDM15P57071 1507 aaPredicted RBP14.66□□□□□ -0.06
FOXCUT-201ENST00000628509 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
FOXCUT-201ENST00000628509 PZPP20742 1482 aa14.65□□□□□ -0.06
FOXCUT-201ENST00000628509 PKD2Q13563 968 aa14.65□□□□□ -0.06
FOXCUT-201ENST00000628509 TONSLQ96HA7 1378 aa14.64□□□□□ -0.07
FOXCUT-201ENST00000628509 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
FOXCUT-201ENST00000628509 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
FOXCUT-201ENST00000628509 TET3O43151 1660 aa14.63□□□□□ -0.07
FOXCUT-201ENST00000628509 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
FOXCUT-201ENST00000628509 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
FOXCUT-201ENST00000628509 RPRD2Q5VT52 1461 aaKnown RBP14.61□□□□□ -0.07
FOXCUT-201ENST00000628509 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
FOXCUT-201ENST00000628509 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
FOXCUT-201ENST00000628509 GGT6Q6P531 493 aa14.6□□□□□ -0.07
FOXCUT-201ENST00000628509 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
FOXCUT-201ENST00000628509 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
FOXCUT-201ENST00000628509 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
FOXCUT-201ENST00000628509 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
FOXCUT-201ENST00000628509 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.08
FOXCUT-201ENST00000628509 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
FOXCUT-201ENST00000628509 ARID4BQ4LE39 1312 aaPredicted RBP14.56□□□□□ -0.08
FOXCUT-201ENST00000628509 EFCAB6Q5THR3 1501 aa14.55□□□□□ -0.08
FOXCUT-201ENST00000628509 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
FOXCUT-201ENST00000628509 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
FOXCUT-201ENST00000628509 MROH1Q8NDA8 1641 aa14.54□□□□□ -0.08
FOXCUT-201ENST00000628509 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
FOXCUT-201ENST00000628509 ABCC3O15438 1527 aa14.52□□□□□ -0.08
FOXCUT-201ENST00000628509 SIN3AQ96ST3 1273 aa14.52□□□□□ -0.09
FOXCUT-201ENST00000628509 CEP152O94986 1710 aa14.52□□□□□ -0.09
FOXCUT-201ENST00000628509 SPHKAPQ2M3C7 1700 aa14.52□□□□□ -0.09
FOXCUT-201ENST00000628509 E9PCH4 1651 aa14.52□□□□□ -0.09
FOXCUT-201ENST00000628509 CAMSAP1Q5T5Y3 1602 aa14.51□□□□□ -0.09
FOXCUT-201ENST00000628509 TRPM2O94759 1503 aa14.51□□□□□ -0.09
FOXCUT-201ENST00000628509 PTPRTO14522 1441 aa14.49□□□□□ -0.09
FOXCUT-201ENST00000628509 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
FOXCUT-201ENST00000628509 SLC52A1Q9NWF4 448 aa14.47□□□□□ -0.09
FOXCUT-201ENST00000628509 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.09
FOXCUT-201ENST00000628509 NPATQ14207 1427 aa14.45□□□□□ -0.1
FOXCUT-201ENST00000628509 KIF1BO60333 1816 aa14.45□□□□□ -0.1
FOXCUT-201ENST00000628509 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
FOXCUT-201ENST00000628509 CLTCQ00610 1675 aaKnown RBP14.43□□□□□ -0.1
FOXCUT-201ENST00000628509 MLECQ14165 292 aa14.43□□□□□ -0.1
FOXCUT-201ENST00000628509 L3MBTL2Q969R5 705 aa14.42□□□□□ -0.1
FOXCUT-201ENST00000628509 NOS1P29475 1434 aa14.41□□□□□ -0.1
FOXCUT-201ENST00000628509 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
FOXCUT-201ENST00000628509 PLA2R1Q13018 1463 aa14.4□□□□□ -0.1
FOXCUT-201ENST00000628509 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
FOXCUT-201ENST00000628509 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 FER1L4A9Z1Z3 1794 aa14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
FOXCUT-201ENST00000628509 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
FOXCUT-201ENST00000628509 SPATA31D1Q6ZQQ2 1576 aa14.36□□□□□ -0.11
FOXCUT-201ENST00000628509 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
FOXCUT-201ENST00000628509 UHRF1BP1Q6BDS2 1440 aa14.35□□□□□ -0.11
FOXCUT-201ENST00000628509 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
FOXCUT-201ENST00000628509 RGL3Q3MIN7 710 aa14.35□□□□□ -0.11
FOXCUT-201ENST00000628509 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
FOXCUT-201ENST00000628509 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
FOXCUT-201ENST00000628509 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
FOXCUT-201ENST00000628509 SIGLEC1Q9BZZ2 1709 aa14.34□□□□□ -0.11
FOXCUT-201ENST00000628509 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.12
FOXCUT-201ENST00000628509 ADGRB3O60242 1522 aa14.32□□□□□ -0.12
FOXCUT-201ENST00000628509 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
FOXCUT-201ENST00000628509 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
FOXCUT-201ENST00000628509 TNRQ92752 1358 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms