RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 PLA2R1Q13018 1463 aa19.73■□□□□ 0.75
SOX2-OT-247ENST00000628347 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
SOX2-OT-247ENST00000628347 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
SOX2-OT-247ENST00000628347 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
SOX2-OT-247ENST00000628347 MYOM3Q5VTT5 1437 aa19.71■□□□□ 0.75
SOX2-OT-247ENST00000628347 KIF3BO15066 747 aa19.71■□□□□ 0.75
SOX2-OT-247ENST00000628347 LTBP4Q8N2S1 1624 aa19.69■□□□□ 0.74
SOX2-OT-247ENST00000628347 PZPP20742 1482 aa19.68■□□□□ 0.74
SOX2-OT-247ENST00000628347 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
SOX2-OT-247ENST00000628347 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
SOX2-OT-247ENST00000628347 RNF17Q9BXT8 1623 aaKnown RBP19.66■□□□□ 0.74
SOX2-OT-247ENST00000628347 PKD2Q13563 968 aa19.66■□□□□ 0.74
SOX2-OT-247ENST00000628347 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
SOX2-OT-247ENST00000628347 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
SOX2-OT-247ENST00000628347 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
SOX2-OT-247ENST00000628347 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
SOX2-OT-247ENST00000628347 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
SOX2-OT-247ENST00000628347 TNRQ92752 1358 aa19.64■□□□□ 0.73
SOX2-OT-247ENST00000628347 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SOX2-OT-247ENST00000628347 FBXO31Q5XUX0 539 aaPredicted RBP19.61■□□□□ 0.73
SOX2-OT-247ENST00000628347 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
SOX2-OT-247ENST00000628347 APLP2Q06481 763 aa19.59■□□□□ 0.73
SOX2-OT-247ENST00000628347 ABCC3O15438 1527 aa19.59■□□□□ 0.73
SOX2-OT-247ENST00000628347 DUOX2Q9NRD8 1548 aa19.59■□□□□ 0.73
SOX2-OT-247ENST00000628347 NLRP1Q9C000 1473 aa19.58■□□□□ 0.72
SOX2-OT-247ENST00000628347 CROCC2H7BZ55 1655 aa19.58■□□□□ 0.72
SOX2-OT-247ENST00000628347 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
SOX2-OT-247ENST00000628347 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.72
SOX2-OT-247ENST00000628347 ABCC5O15440 1437 aa19.56■□□□□ 0.72
SOX2-OT-247ENST00000628347 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
SOX2-OT-247ENST00000628347 SPATA31D1Q6ZQQ2 1576 aa19.55■□□□□ 0.72
SOX2-OT-247ENST00000628347 ZNF335Q9H4Z2 1342 aaPredicted RBP19.54■□□□□ 0.72
SOX2-OT-247ENST00000628347 FGD6Q6ZV73 1430 aa19.54■□□□□ 0.72
SOX2-OT-247ENST00000628347 NEURL4Q96JN8 1562 aa19.53■□□□□ 0.72
SOX2-OT-247ENST00000628347 ERBINQ96RT1 1412 aa19.53■□□□□ 0.72
SOX2-OT-247ENST00000628347 KIF15Q9NS87 1388 aa19.52■□□□□ 0.72
SOX2-OT-247ENST00000628347 UGGT1Q9NYU2 1555 aa19.52■□□□□ 0.71
SOX2-OT-247ENST00000628347 DAPK1P53355 1430 aa19.51■□□□□ 0.71
SOX2-OT-247ENST00000628347 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
SOX2-OT-247ENST00000628347 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
SOX2-OT-247ENST00000628347 CEP152O94986 1710 aa19.51■□□□□ 0.71
SOX2-OT-247ENST00000628347 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
SOX2-OT-247ENST00000628347 DEPDC5O75140 1603 aa19.49■□□□□ 0.71
SOX2-OT-247ENST00000628347 MED14O60244 1454 aa19.48■□□□□ 0.71
SOX2-OT-247ENST00000628347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.71
SOX2-OT-247ENST00000628347 FOXD1Q16676 465 aa19.48■□□□□ 0.71
SOX2-OT-247ENST00000628347 ANKLE2Q86XL3 938 aa19.48■□□□□ 0.71
SOX2-OT-247ENST00000628347 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
SOX2-OT-247ENST00000628347 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
SOX2-OT-247ENST00000628347 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
SOX2-OT-247ENST00000628347 CPS1P31327 1500 aa19.44■□□□□ 0.7
SOX2-OT-247ENST00000628347 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
SOX2-OT-247ENST00000628347 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
SOX2-OT-247ENST00000628347 ADGRL2O95490 1459 aa19.41■□□□□ 0.7
SOX2-OT-247ENST00000628347 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
SOX2-OT-247ENST00000628347 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
SOX2-OT-247ENST00000628347 VWDEQ8N2E2 1590 aa19.41■□□□□ 0.7
SOX2-OT-247ENST00000628347 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
SOX2-OT-247ENST00000628347 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
SOX2-OT-247ENST00000628347 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
SOX2-OT-247ENST00000628347 KANK1Q14678 1352 aa19.39■□□□□ 0.69
SOX2-OT-247ENST00000628347 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
SOX2-OT-247ENST00000628347 SLIT1O75093 1534 aa19.36■□□□□ 0.69
SOX2-OT-247ENST00000628347 ARHGAP23Q9P227 1491 aa19.36■□□□□ 0.69
SOX2-OT-247ENST00000628347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
SOX2-OT-247ENST00000628347 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
SOX2-OT-247ENST00000628347 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
SOX2-OT-247ENST00000628347 PIK3C2BO00750 1634 aa19.32■□□□□ 0.68
SOX2-OT-247ENST00000628347 EFCAB6Q5THR3 1501 aa19.31■□□□□ 0.68
SOX2-OT-247ENST00000628347 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
SOX2-OT-247ENST00000628347 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
SOX2-OT-247ENST00000628347 NOS1P29475 1434 aa19.3■□□□□ 0.68
SOX2-OT-247ENST00000628347 STRCP1A6NGW2 1772 aa19.29■□□□□ 0.68
SOX2-OT-247ENST00000628347 SYNMO15061 1565 aa19.29■□□□□ 0.68
SOX2-OT-247ENST00000628347 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
SOX2-OT-247ENST00000628347 TOM1O60784 492 aa19.29■□□□□ 0.68
SOX2-OT-247ENST00000628347 LTKP29376 864 aa19.28■□□□□ 0.68
SOX2-OT-247ENST00000628347 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
SOX2-OT-247ENST00000628347 TMEM2Q9UHN6 1383 aa19.27■□□□□ 0.68
SOX2-OT-247ENST00000628347 LRRC7Q96NW7 1537 aa19.26■□□□□ 0.67
SOX2-OT-247ENST00000628347 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
SOX2-OT-247ENST00000628347 RPRD2Q5VT52 1461 aaKnown RBP19.26■□□□□ 0.67
SOX2-OT-247ENST00000628347 IDI1Q13907 227 aa19.25■□□□□ 0.67
SOX2-OT-247ENST00000628347 ALKQ9UM73 1620 aa19.25■□□□□ 0.67
SOX2-OT-247ENST00000628347 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
SOX2-OT-247ENST00000628347 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
SOX2-OT-247ENST00000628347 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
SOX2-OT-247ENST00000628347 TET3O43151 1660 aa19.23■□□□□ 0.67
SOX2-OT-247ENST00000628347 UNC13BO14795 1591 aa19.23■□□□□ 0.67
SOX2-OT-247ENST00000628347 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
SOX2-OT-247ENST00000628347 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
SOX2-OT-247ENST00000628347 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
SOX2-OT-247ENST00000628347 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
SOX2-OT-247ENST00000628347 HSPA1LP34931 641 aa19.19■□□□□ 0.66
SOX2-OT-247ENST00000628347 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
SOX2-OT-247ENST00000628347 XIRP1Q702N8 1843 aaKnown RBP19.15■□□□□ 0.66
SOX2-OT-247ENST00000628347 IQGAP3Q86VI3 1631 aa19.14■□□□□ 0.66
SOX2-OT-247ENST00000628347 ZFYVE9O95405 1425 aa19.13■□□□□ 0.65
SOX2-OT-247ENST00000628347 E9PCH4 1651 aa19.12■□□□□ 0.65
SOX2-OT-247ENST00000628347 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms