RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 A2MP01023 1474 aa14.22□□□□□ -0.13
PDLIM5-223ENST00000627587 CAMSAP2Q08AD1 1489 aa14.22□□□□□ -0.13
PDLIM5-223ENST00000627587 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
PDLIM5-223ENST00000627587 PKD2Q13563 968 aa14.21□□□□□ -0.13
PDLIM5-223ENST00000627587 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.14
PDLIM5-223ENST00000627587 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
PDLIM5-223ENST00000627587 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
PDLIM5-223ENST00000627587 LTBP4Q8N2S1 1624 aa14.2□□□□□ -0.14
PDLIM5-223ENST00000627587 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 GGT6Q6P531 493 aa14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 PLXNC1O60486 1568 aa14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 INO80Q9ULG1 1556 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 GCC2Q8IWJ2 1684 aa14.19□□□□□ -0.14
PDLIM5-223ENST00000627587 RSPH4AQ5TD94 716 aa14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 RTEL1-TNFRSF6BF6WH68 1400 aa14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 DAPK1P53355 1430 aa14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 HFM1A2PYH4 1435 aa14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 ABCC5O15440 1437 aa14.18□□□□□ -0.14
PDLIM5-223ENST00000627587 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 ADGBQ8N7X0 1667 aa14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 PLA2R1Q13018 1463 aa14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
PDLIM5-223ENST00000627587 NAIPQ13075 1403 aa14.16□□□□□ -0.14
PDLIM5-223ENST00000627587 DHX29Q7Z478 1369 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-223ENST00000627587 ZNF142P52746 1687 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-223ENST00000627587 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
PDLIM5-223ENST00000627587 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
PDLIM5-223ENST00000627587 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-223ENST00000627587 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
PDLIM5-223ENST00000627587 FAM135AQ9P2D6 1515 aa14.11□□□□□ -0.15
PDLIM5-223ENST00000627587 SOCS7O14512 581 aa14.11□□□□□ -0.15
PDLIM5-223ENST00000627587 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-223ENST00000627587 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
PDLIM5-223ENST00000627587 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
PDLIM5-223ENST00000627587 ROCK1Q13464 1354 aa14.1□□□□□ -0.15
PDLIM5-223ENST00000627587 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-223ENST00000627587 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
PDLIM5-223ENST00000627587 KIF3BO15066 747 aa14.09□□□□□ -0.15
PDLIM5-223ENST00000627587 ADGRL2O95490 1459 aa14.09□□□□□ -0.15
PDLIM5-223ENST00000627587 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.15
PDLIM5-223ENST00000627587 TSPY4P0CV99 314 aa14.08□□□□□ -0.16
PDLIM5-223ENST00000627587 TSPY10P0CW01 314 aa14.08□□□□□ -0.16
PDLIM5-223ENST00000627587 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
PDLIM5-223ENST00000627587 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
PDLIM5-223ENST00000627587 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
PDLIM5-223ENST00000627587 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
PDLIM5-223ENST00000627587 TNRQ92752 1358 aa14.07□□□□□ -0.16
PDLIM5-223ENST00000627587 THEMISQ8N1K5 641 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-223ENST00000627587 SPATA31D1Q6ZQQ2 1576 aa14.06□□□□□ -0.16
PDLIM5-223ENST00000627587 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-223ENST00000627587 ANKLE2Q86XL3 938 aa14.05□□□□□ -0.16
PDLIM5-223ENST00000627587 PZPP20742 1482 aa14.05□□□□□ -0.16
PDLIM5-223ENST00000627587 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
PDLIM5-223ENST00000627587 MAST1Q9Y2H9 1570 aa14.04□□□□□ -0.16
PDLIM5-223ENST00000627587 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
PDLIM5-223ENST00000627587 TOM1O60784 492 aa14.03□□□□□ -0.16
PDLIM5-223ENST00000627587 FBXO31Q5XUX0 539 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-223ENST00000627587 CPS1P31327 1500 aa14.02□□□□□ -0.17
PDLIM5-223ENST00000627587 NLRP1Q9C000 1473 aa14.02□□□□□ -0.17
PDLIM5-223ENST00000627587 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
PDLIM5-223ENST00000627587 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
PDLIM5-223ENST00000627587 MED14O60244 1454 aa13.97□□□□□ -0.17
PDLIM5-223ENST00000627587 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
PDLIM5-223ENST00000627587 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.17
PDLIM5-223ENST00000627587 DEPDC5O75140 1603 aa13.96□□□□□ -0.18
PDLIM5-223ENST00000627587 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-223ENST00000627587 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
PDLIM5-223ENST00000627587 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-223ENST00000627587 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
PDLIM5-223ENST00000627587 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-223ENST00000627587 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-223ENST00000627587 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
PDLIM5-223ENST00000627587 HSPA1LP34931 641 aa13.92□□□□□ -0.18
PDLIM5-223ENST00000627587 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
PDLIM5-223ENST00000627587 ABCC3O15438 1527 aa13.91□□□□□ -0.18
PDLIM5-223ENST00000627587 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
PDLIM5-223ENST00000627587 ERVK-7P63135 1459 aa13.89□□□□□ -0.19
PDLIM5-223ENST00000627587 UNC13BO14795 1591 aa13.89□□□□□ -0.19
PDLIM5-223ENST00000627587 IQGAP1P46940 1657 aa13.89□□□□□ -0.19
PDLIM5-223ENST00000627587 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
PDLIM5-223ENST00000627587 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
PDLIM5-223ENST00000627587 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-223ENST00000627587 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
PDLIM5-223ENST00000627587 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
PDLIM5-223ENST00000627587 EID1Q9Y6B2 187 aa13.86□□□□□ -0.19
PDLIM5-223ENST00000627587 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 KANK1Q14678 1352 aa13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
PDLIM5-223ENST00000627587 SYNMO15061 1565 aa13.83□□□□□ -0.19
PDLIM5-223ENST00000627587 SCAF11Q99590 1463 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-223ENST00000627587 IQGAP3Q86VI3 1631 aa13.83□□□□□ -0.2
PDLIM5-223ENST00000627587 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
PDLIM5-223ENST00000627587 SLIT1O75093 1534 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms