RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 EEA1Q15075 1411 aa14.32□□□□□ -0.12
TCF4-258ENST00000627320 ZC3H13Q5T200 1668 aaKnown RBP14.31□□□□□ -0.12
TCF4-258ENST00000627320 TOM1O60784 492 aa14.31□□□□□ -0.12
TCF4-258ENST00000627320 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
TCF4-258ENST00000627320 SPAG9O60271 1321 aaKnown RBP14.31□□□□□ -0.12
TCF4-258ENST00000627320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
TCF4-258ENST00000627320 CFAP65Q6ZU64 1925 aaKnown RBP14.31□□□□□ -0.12
TCF4-258ENST00000627320 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
TCF4-258ENST00000627320 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
TCF4-258ENST00000627320 DEPDC5O75140 1603 aa14.27□□□□□ -0.12
TCF4-258ENST00000627320 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
TCF4-258ENST00000627320 SYNMO15061 1565 aa14.26□□□□□ -0.13
TCF4-258ENST00000627320 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
TCF4-258ENST00000627320 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
TCF4-258ENST00000627320 TNRQ92752 1358 aa14.25□□□□□ -0.13
TCF4-258ENST00000627320 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
TCF4-258ENST00000627320 UGGT1Q9NYU2 1555 aa14.24□□□□□ -0.13
TCF4-258ENST00000627320 CCDC18Q5T9S5 1454 aa14.24□□□□□ -0.13
TCF4-258ENST00000627320 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
TCF4-258ENST00000627320 TIAM1Q13009 1591 aa14.23□□□□□ -0.13
TCF4-258ENST00000627320 KDM5DQ9BY66 1539 aa14.22□□□□□ -0.13
TCF4-258ENST00000627320 CEP152O94986 1710 aa14.22□□□□□ -0.13
TCF4-258ENST00000627320 PZPP20742 1482 aa14.22□□□□□ -0.13
TCF4-258ENST00000627320 MED14O60244 1454 aa14.21□□□□□ -0.13
TCF4-258ENST00000627320 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.14
TCF4-258ENST00000627320 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
TCF4-258ENST00000627320 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
TCF4-258ENST00000627320 FYCO1Q9BQS8 1478 aa14.17□□□□□ -0.14
TCF4-258ENST00000627320 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
TCF4-258ENST00000627320 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
TCF4-258ENST00000627320 KIF3BO15066 747 aa14.14□□□□□ -0.15
TCF4-258ENST00000627320 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
TCF4-258ENST00000627320 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
TCF4-258ENST00000627320 MIA2Q96PC5 1412 aa14.14□□□□□ -0.15
TCF4-258ENST00000627320 PLEKHH2Q8IVE3 1493 aa14.13□□□□□ -0.15
TCF4-258ENST00000627320 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
TCF4-258ENST00000627320 MROH1Q8NDA8 1641 aa14.13□□□□□ -0.15
TCF4-258ENST00000627320 RBM33Q96EV2 1170 aaKnown RBP14.13□□□□□ -0.15
TCF4-258ENST00000627320 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
TCF4-258ENST00000627320 PHLPP1O60346 1717 aa14.12□□□□□ -0.15
TCF4-258ENST00000627320 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
TCF4-258ENST00000627320 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
TCF4-258ENST00000627320 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
TCF4-258ENST00000627320 ABCC3O15438 1527 aa14.1□□□□□ -0.15
TCF4-258ENST00000627320 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
TCF4-258ENST00000627320 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
TCF4-258ENST00000627320 CAMSAP2Q08AD1 1489 aa14.08□□□□□ -0.16
TCF4-258ENST00000627320 PIK3C2BO00750 1634 aa14.08□□□□□ -0.16
TCF4-258ENST00000627320 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
TCF4-258ENST00000627320 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
TCF4-258ENST00000627320 LRP6O75581 1613 aa14.07□□□□□ -0.16
TCF4-258ENST00000627320 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
TCF4-258ENST00000627320 LTKP29376 864 aa14.06□□□□□ -0.16
TCF4-258ENST00000627320 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
TCF4-258ENST00000627320 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
TCF4-258ENST00000627320 COL16A1Q07092 1604 aaPredicted RBP14.04□□□□□ -0.16
TCF4-258ENST00000627320 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
TCF4-258ENST00000627320 EHBP1L1Q8N3D4 1523 aa14.03□□□□□ -0.16
TCF4-258ENST00000627320 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
TCF4-258ENST00000627320 ARHGAP23Q9P227 1491 aa14.02□□□□□ -0.16
TCF4-258ENST00000627320 TMEM94Q12767 1356 aa14.02□□□□□ -0.17
TCF4-258ENST00000627320 SLIT1O75093 1534 aa14.01□□□□□ -0.17
TCF4-258ENST00000627320 FAM135BQ49AJ0 1406 aa14.01□□□□□ -0.17
TCF4-258ENST00000627320 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
TCF4-258ENST00000627320 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
TCF4-258ENST00000627320 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
TCF4-258ENST00000627320 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
TCF4-258ENST00000627320 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
TCF4-258ENST00000627320 TET3O43151 1660 aa13.96□□□□□ -0.17
TCF4-258ENST00000627320 TXNDC2Q86VQ3 553 aa13.96□□□□□ -0.17
TCF4-258ENST00000627320 SRCAPQ6ZRS2 3230 aa13.96□□□□□ -0.18
TCF4-258ENST00000627320 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
TCF4-258ENST00000627320 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
TCF4-258ENST00000627320 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
TCF4-258ENST00000627320 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
TCF4-258ENST00000627320 MAST1Q9Y2H9 1570 aa13.94□□□□□ -0.18
TCF4-258ENST00000627320 SLC26A8Q96RN1 970 aa13.93□□□□□ -0.18
TCF4-258ENST00000627320 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
TCF4-258ENST00000627320 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
TCF4-258ENST00000627320 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
TCF4-258ENST00000627320 CROCC2H7BZ55 1655 aa13.9□□□□□ -0.18
TCF4-258ENST00000627320 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
TCF4-258ENST00000627320 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
TCF4-258ENST00000627320 JCADQ9P266 1359 aa13.89□□□□□ -0.19
TCF4-258ENST00000627320 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
TCF4-258ENST00000627320 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
TCF4-258ENST00000627320 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
TCF4-258ENST00000627320 RGS12O14924 1447 aa13.86□□□□□ -0.19
TCF4-258ENST00000627320 SETBP1Q9Y6X0 1596 aa13.86□□□□□ -0.19
TCF4-258ENST00000627320 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
TCF4-258ENST00000627320 KCNA6P17658 529 aa13.85□□□□□ -0.19
TCF4-258ENST00000627320 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
TCF4-258ENST00000627320 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
TCF4-258ENST00000627320 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
TCF4-258ENST00000627320 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
TCF4-258ENST00000627320 MSH6P52701 1360 aa13.83□□□□□ -0.2
TCF4-258ENST00000627320 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
TCF4-258ENST00000627320 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
TCF4-258ENST00000627320 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
TCF4-258ENST00000627320 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms