RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MROH2AA6NES4 1674 aa25.58■■□□□ 1.69
UBE3D-208ENST00000626828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.69
UBE3D-208ENST00000626828 CLTCQ00610 1675 aaKnown RBP25.58■■□□□ 1.68
UBE3D-208ENST00000626828 LMTK3Q96Q04 1460 aa25.56■■□□□ 1.68
UBE3D-208ENST00000626828 EIF2AK4Q9P2K8 1649 aaKnown RBP25.54■■□□□ 1.68
UBE3D-208ENST00000626828 NPATQ14207 1427 aa25.54■■□□□ 1.68
UBE3D-208ENST00000626828 ERBINQ96RT1 1412 aa25.54■■□□□ 1.68
UBE3D-208ENST00000626828 FAM135AQ9P2D6 1515 aa25.53■■□□□ 1.68
UBE3D-208ENST00000626828 HSPA2P54652 639 aa25.53■■□□□ 1.68
UBE3D-208ENST00000626828 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
UBE3D-208ENST00000626828 ITGAEP38570 1179 aa25.52■■□□□ 1.68
UBE3D-208ENST00000626828 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
UBE3D-208ENST00000626828 PTPRKQ15262 1439 aa25.5■■□□□ 1.67
UBE3D-208ENST00000626828 PREX1Q8TCU6 1659 aa25.49■■□□□ 1.67
UBE3D-208ENST00000626828 RNF17Q9BXT8 1623 aaKnown RBP25.49■■□□□ 1.67
UBE3D-208ENST00000626828 KDM5DQ9BY66 1539 aa25.49■■□□□ 1.67
UBE3D-208ENST00000626828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
UBE3D-208ENST00000626828 RRBP1Q9P2E9 1410 aaKnown RBP25.47■■□□□ 1.67
UBE3D-208ENST00000626828 ROCK1Q13464 1354 aa25.46■■□□□ 1.67
UBE3D-208ENST00000626828 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
UBE3D-208ENST00000626828 KANK1Q14678 1352 aa25.44■■□□□ 1.66
UBE3D-208ENST00000626828 ANKRD50Q9ULJ7 1429 aa25.44■■□□□ 1.66
UBE3D-208ENST00000626828 PZPP20742 1482 aa25.41■■□□□ 1.66
UBE3D-208ENST00000626828 ABCC3O15438 1527 aa25.41■■□□□ 1.66
UBE3D-208ENST00000626828 MROH1Q8NDA8 1641 aa25.4■■□□□ 1.66
UBE3D-208ENST00000626828 TNRQ92752 1358 aa25.38■■□□□ 1.65
UBE3D-208ENST00000626828 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
UBE3D-208ENST00000626828 DMRT2Q9Y5R5 561 aa25.36■■□□□ 1.65
UBE3D-208ENST00000626828 PRDM15P57071 1507 aaPredicted RBP25.36■■□□□ 1.65
UBE3D-208ENST00000626828 CFAP65Q6ZU64 1925 aaKnown RBP25.35■■□□□ 1.65
UBE3D-208ENST00000626828 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
UBE3D-208ENST00000626828 ARHGAP31Q2M1Z3 1444 aa25.33■■□□□ 1.65
UBE3D-208ENST00000626828 CEP152O94986 1710 aa25.32■■□□□ 1.64
UBE3D-208ENST00000626828 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
UBE3D-208ENST00000626828 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
UBE3D-208ENST00000626828 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
UBE3D-208ENST00000626828 THEMISQ8N1K5 641 aaPredicted RBP25.28■■□□□ 1.64
UBE3D-208ENST00000626828 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
UBE3D-208ENST00000626828 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
UBE3D-208ENST00000626828 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
UBE3D-208ENST00000626828 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
UBE3D-208ENST00000626828 ERVK-7P63135 1459 aa25.25■■□□□ 1.63
UBE3D-208ENST00000626828 SPATA31D1Q6ZQQ2 1576 aa25.25■■□□□ 1.63
UBE3D-208ENST00000626828 PKD2Q13563 968 aa25.24■■□□□ 1.63
UBE3D-208ENST00000626828 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
UBE3D-208ENST00000626828 ZNF142P52746 1687 aaPredicted RBP25.23■■□□□ 1.63
UBE3D-208ENST00000626828 NUP155O75694 1391 aa25.22■■□□□ 1.63
UBE3D-208ENST00000626828 NCKAP5LQ9HCH0 1330 aa25.21■■□□□ 1.63
UBE3D-208ENST00000626828 PLA2R1Q13018 1463 aa25.19■■□□□ 1.62
UBE3D-208ENST00000626828 PTPRTO14522 1441 aa25.19■■□□□ 1.62
UBE3D-208ENST00000626828 NAIPQ13075 1403 aa25.19■■□□□ 1.62
UBE3D-208ENST00000626828 UNC13BO14795 1591 aa25.18■■□□□ 1.62
UBE3D-208ENST00000626828 ANKLE2Q86XL3 938 aa25.17■■□□□ 1.62
UBE3D-208ENST00000626828 SLC52A1Q9NWF4 448 aa25.16■■□□□ 1.62
UBE3D-208ENST00000626828 UGGT1Q9NYU2 1555 aa25.16■■□□□ 1.62
UBE3D-208ENST00000626828 IDI1Q13907 227 aa25.15■■□□□ 1.62
UBE3D-208ENST00000626828 EFCAB6Q5THR3 1501 aa25.15■■□□□ 1.62
UBE3D-208ENST00000626828 RPRD2Q5VT52 1461 aaKnown RBP25.15■■□□□ 1.62
UBE3D-208ENST00000626828 HFM1A2PYH4 1435 aa25.14■■□□□ 1.62
UBE3D-208ENST00000626828 STAG3Q9UJ98 1225 aa25.14■■□□□ 1.62
UBE3D-208ENST00000626828 TET3O43151 1660 aa25.13■■□□□ 1.61
UBE3D-208ENST00000626828 NOS1P29475 1434 aa25.12■■□□□ 1.61
UBE3D-208ENST00000626828 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
UBE3D-208ENST00000626828 IQGAP3Q86VI3 1631 aa25.1■■□□□ 1.61
UBE3D-208ENST00000626828 GCC2Q8IWJ2 1684 aa25.09■■□□□ 1.61
UBE3D-208ENST00000626828 EID1Q9Y6B2 187 aa25.04■■□□□ 1.6
UBE3D-208ENST00000626828 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
UBE3D-208ENST00000626828 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
UBE3D-208ENST00000626828 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
UBE3D-208ENST00000626828 SYNMO15061 1565 aa25.02■■□□□ 1.6
UBE3D-208ENST00000626828 E9PCH4 1651 aa25.02■■□□□ 1.6
UBE3D-208ENST00000626828 CERKQ8TCT0 537 aa25.02■■□□□ 1.6
UBE3D-208ENST00000626828 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
UBE3D-208ENST00000626828 LTKP29376 864 aa24.99■■□□□ 1.59
UBE3D-208ENST00000626828 SLC4A1APQ9BWU0 796 aaKnown RBP24.99■■□□□ 1.59
UBE3D-208ENST00000626828 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
UBE3D-208ENST00000626828 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
UBE3D-208ENST00000626828 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
UBE3D-208ENST00000626828 MED14O60244 1454 aa24.97■■□□□ 1.59
UBE3D-208ENST00000626828 NPHP4O75161 1426 aaPredicted RBP24.97■■□□□ 1.59
UBE3D-208ENST00000626828 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
UBE3D-208ENST00000626828 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
UBE3D-208ENST00000626828 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
UBE3D-208ENST00000626828 SLIT1O75093 1534 aa24.96■■□□□ 1.59
UBE3D-208ENST00000626828 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
UBE3D-208ENST00000626828 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
UBE3D-208ENST00000626828 ZNF335Q9H4Z2 1342 aaPredicted RBP24.93■■□□□ 1.58
UBE3D-208ENST00000626828 SCAF11Q99590 1463 aaKnown RBP24.93■■□□□ 1.58
UBE3D-208ENST00000626828 FBXO41Q8TF61 875 aa24.92■■□□□ 1.58
UBE3D-208ENST00000626828 ILDR1Q86SU0 546 aaPredicted RBP24.91■■□□□ 1.58
UBE3D-208ENST00000626828 MPHOSPH9Q99550 1183 aa24.9■■□□□ 1.58
UBE3D-208ENST00000626828 ADGRB3O60242 1522 aa24.9■■□□□ 1.58
UBE3D-208ENST00000626828 LTBP4Q8N2S1 1624 aa24.88■■□□□ 1.57
UBE3D-208ENST00000626828 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.88■■□□□ 1.57
UBE3D-208ENST00000626828 HRCP23327 699 aa24.86■■□□□ 1.57
UBE3D-208ENST00000626828 TMEM131LA2VDJ0 1609 aa24.86■■□□□ 1.57
UBE3D-208ENST00000626828 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
UBE3D-208ENST00000626828 SPHKAPQ2M3C7 1700 aa24.85■■□□□ 1.57
UBE3D-208ENST00000626828 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
UBE3D-208ENST00000626828 BCANQ96GW7 911 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms