RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 UHRF1BP1Q6BDS2 1440 aa34.64■■■■□ 3.14
SF1-220ENST00000626028 KDM5DQ9BY66 1539 aa34.6■■■■□ 3.13
SF1-220ENST00000626028 ZC3H13Q5T200 1668 aaKnown RBP34.57■■■■□ 3.12
SF1-220ENST00000626028 KIF15Q9NS87 1388 aa34.53■■■■□ 3.12
SF1-220ENST00000626028 PTPRKQ15262 1439 aa34.53■■■■□ 3.12
SF1-220ENST00000626028 ERBINQ96RT1 1412 aa34.53■■■■□ 3.12
SF1-220ENST00000626028 HSPA2P54652 639 aa34.52■■■■□ 3.12
SF1-220ENST00000626028 ANKRD30AQ9BXX3 1397 aa34.49■■■■□ 3.11
SF1-220ENST00000626028 ZNF142P52746 1687 aaPredicted RBP34.49■■■■□ 3.11
SF1-220ENST00000626028 WASHC2CQ9Y4E1 1318 aa34.49■■■■□ 3.11
SF1-220ENST00000626028 ADGRL2O95490 1459 aa34.47■■■■□ 3.11
SF1-220ENST00000626028 MROH1Q8NDA8 1641 aa34.46■■■■□ 3.11
SF1-220ENST00000626028 MYO3AQ8NEV4 1616 aa34.46■■■■□ 3.11
SF1-220ENST00000626028 PZPP20742 1482 aa34.46■■■■□ 3.11
SF1-220ENST00000626028 NCOA1Q15788 1441 aa34.45■■■■□ 3.11
SF1-220ENST00000626028 STRCQ7RTU9 1775 aa34.44■■■■□ 3.1
SF1-220ENST00000626028 DEPDC5O75140 1603 aa34.44■■■■□ 3.1
SF1-220ENST00000626028 FAM50AQ14320 339 aaKnown RBP34.43■■■■□ 3.1
SF1-220ENST00000626028 PRDM15P57071 1507 aaPredicted RBP34.42■■■■□ 3.1
SF1-220ENST00000626028 RRP7BPQ9NSQ0 103 aa34.42■■■■□ 3.1
SF1-220ENST00000626028 ABCC3O15438 1527 aa34.41■■■■□ 3.1
SF1-220ENST00000626028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.4■■■■□ 3.1
SF1-220ENST00000626028 CEP152O94986 1710 aa34.38■■■■□ 3.09
SF1-220ENST00000626028 CEP170BQ9Y4F5 1589 aaPredicted RBP34.37■■■■□ 3.09
SF1-220ENST00000626028 DMRT2Q9Y5R5 561 aa34.36■■■■□ 3.09
SF1-220ENST00000626028 CAMSAP1Q5T5Y3 1602 aa34.34■■■■□ 3.09
SF1-220ENST00000626028 CHIC2Q9UKJ5 165 aa34.34■■■■□ 3.09
SF1-220ENST00000626028 TNRQ92752 1358 aa34.3■■■■□ 3.08
SF1-220ENST00000626028 A2ML1A8K2U0 1454 aa34.3■■■■□ 3.08
SF1-220ENST00000626028 PLA2R1Q13018 1463 aa34.27■■■■□ 3.08
SF1-220ENST00000626028 ROCK1Q13464 1354 aa34.27■■■■□ 3.08
SF1-220ENST00000626028 KANK1Q14678 1352 aa34.27■■■■□ 3.08
SF1-220ENST00000626028 SPATA31D1Q6ZQQ2 1576 aa34.27■■■■□ 3.08
SF1-220ENST00000626028 NLRP1Q9C000 1473 aa34.27■■■■□ 3.08
SF1-220ENST00000626028 CFAP65Q6ZU64 1925 aaKnown RBP34.26■■■■□ 3.08
SF1-220ENST00000626028 ARHGAP31Q2M1Z3 1444 aa34.26■■■■□ 3.07
SF1-220ENST00000626028 VWDEQ8N2E2 1590 aa34.25■■■■□ 3.07
SF1-220ENST00000626028 FBXO31Q5XUX0 539 aaPredicted RBP34.25■■■■□ 3.07
SF1-220ENST00000626028 PTPRTO14522 1441 aa34.24■■■■□ 3.07
SF1-220ENST00000626028 ANKRD50Q9ULJ7 1429 aa34.23■■■■□ 3.07
SF1-220ENST00000626028 LMTK2Q8IWU2 1503 aa34.23■■■■□ 3.07
SF1-220ENST00000626028 PPARGC1BQ86YN6 1023 aaKnown RBP34.2■■■■□ 3.07
SF1-220ENST00000626028 RRBP1Q9P2E9 1410 aaKnown RBP34.2■■■■□ 3.06
SF1-220ENST00000626028 ERVK-7P63135 1459 aa34.2■■■■□ 3.06
SF1-220ENST00000626028 PKD2Q13563 968 aa34.16■■■■□ 3.06
SF1-220ENST00000626028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.14■■■■□ 3.061e-12■■■□□ 16.4
SF1-220ENST00000626028 POLR1AO95602 1720 aaPredicted RBP34.13■■■■□ 3.05
SF1-220ENST00000626028 UNC13BO14795 1591 aa34.11■■■■□ 3.05
SF1-220ENST00000626028 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
SF1-220ENST00000626028 EFCAB6Q5THR3 1501 aa34.09■■■■□ 3.05
SF1-220ENST00000626028 THEMISQ8N1K5 641 aaPredicted RBP34.08■■■■□ 3.05
SF1-220ENST00000626028 TET3O43151 1660 aa34.06■■■■□ 3.04
SF1-220ENST00000626028 GCC2Q8IWJ2 1684 aa34.06■■■■□ 3.04
SF1-220ENST00000626028 RPRD2Q5VT52 1461 aaKnown RBP34.05■■■■□ 3.04
SF1-220ENST00000626028 KDM5AP29375 1690 aaKnown RBP34.04■■■■□ 3.04
SF1-220ENST00000626028 UBR1Q8IWV7 1749 aa34.04■■■■□ 3.04
SF1-220ENST00000626028 NCKAP5LQ9HCH0 1330 aa34.02■■■■□ 3.04
SF1-220ENST00000626028 ITGAEP38570 1179 aa34■■■■□ 3.03
SF1-220ENST00000626028 IQGAP3Q86VI3 1631 aa33.99■■■■□ 3.03
SF1-220ENST00000626028 ILDR1Q86SU0 546 aaPredicted RBP33.96■■■■□ 3.03
SF1-220ENST00000626028 FBXO41Q8TF61 875 aa33.96■■■■□ 3.03
SF1-220ENST00000626028 NEURL4Q96JN8 1562 aa33.96■■■■□ 3.03
SF1-220ENST00000626028 ANKLE2Q86XL3 938 aa33.95■■■■□ 3.03
SF1-220ENST00000626028 CERKQ8TCT0 537 aa33.95■■■■□ 3.03
SF1-220ENST00000626028 NOS1P29475 1434 aa33.95■■■■□ 3.02
SF1-220ENST00000626028 MED14O60244 1454 aa33.93■■■■□ 3.02
SF1-220ENST00000626028 SYNMO15061 1565 aa33.92■■■■□ 3.02
SF1-220ENST00000626028 PIK3C2BO00750 1634 aa33.92■■■■□ 3.02
SF1-220ENST00000626028 LTBP4Q8N2S1 1624 aa33.91■■■■□ 3.02
SF1-220ENST00000626028 SLIT1O75093 1534 aa33.88■■■■□ 3.01
SF1-220ENST00000626028 E9PCH4 1651 aa33.87■■■■□ 3.01
SF1-220ENST00000626028 IQGAP1P46940 1657 aa33.87■■■■□ 3.01
SF1-220ENST00000626028 SLC52A1Q9NWF4 448 aa33.86■■■■□ 3.01
SF1-220ENST00000626028 IQSEC2Q5JU85 1478 aa33.86■■■■□ 3.01
SF1-220ENST00000626028 ARHGAP23Q9P227 1491 aa33.85■■■■□ 3.01
SF1-220ENST00000626028 NUP155O75694 1391 aa33.84■■■■□ 3.01
SF1-220ENST00000626028 NAIPQ13075 1403 aa33.83■■■■□ 3.01
SF1-220ENST00000626028 HFM1A2PYH4 1435 aa33.81■■■■□ 3
SF1-220ENST00000626028 NPHP4O75161 1426 aaPredicted RBP33.81■■■■□ 3
SF1-220ENST00000626028 IDI1Q13907 227 aa33.81■■■■□ 3
SF1-220ENST00000626028 SCAF11Q99590 1463 aaKnown RBP33.79■■■■□ 3
SF1-220ENST00000626028 ADGRB3O60242 1522 aa33.79■■■■□ 3
SF1-220ENST00000626028 STAG3Q9UJ98 1225 aa33.77■■■■□ 3
SF1-220ENST00000626028 TMEM2Q9UHN6 1383 aa33.75■■■□□ 2.99
SF1-220ENST00000626028 ZNF335Q9H4Z2 1342 aaPredicted RBP33.75■■■□□ 2.99
SF1-220ENST00000626028 EID1Q9Y6B2 187 aa33.73■■■□□ 2.99
SF1-220ENST00000626028 MYO5BQ9ULV0 1848 aa33.72■■■□□ 2.99
SF1-220ENST00000626028 CPS1P31327 1500 aa33.71■■■□□ 2.99
SF1-220ENST00000626028 SPHKAPQ2M3C7 1700 aa33.7■■■□□ 2.98
SF1-220ENST00000626028 TMEM131LA2VDJ0 1609 aa33.69■■■□□ 2.98
SF1-220ENST00000626028 TXNDC2Q86VQ3 553 aa33.69■■■□□ 2.98
SF1-220ENST00000626028 LTKP29376 864 aa33.65■■■□□ 2.98
SF1-220ENST00000626028 ACIN1Q9UKV3 1341 aaKnown RBP33.58■■■□□ 2.97
SF1-220ENST00000626028 HDGFP51858 240 aaKnown RBP33.58■■■□□ 2.97
SF1-220ENST00000626028 ZFYVE9O95405 1425 aa33.56■■■□□ 2.96
SF1-220ENST00000626028 STRCP1A6NGW2 1772 aa33.56■■■□□ 2.96
SF1-220ENST00000626028 TRPM2O94759 1503 aa33.52■■■□□ 2.96
SF1-220ENST00000626028 TRIM52Q96A61 297 aa33.5■■■□□ 2.95
SF1-220ENST00000626028 RIMS2Q9UQ26 1411 aa33.5■■■□□ 2.95
SF1-220ENST00000626028 KIF1BO60333 1816 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms