RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
LINC01560-202ENST00000624822 RSPH4AQ5TD94 716 aa14.71□□□□□ -0.05
LINC01560-202ENST00000624822 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
LINC01560-202ENST00000624822 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
LINC01560-202ENST00000624822 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
LINC01560-202ENST00000624822 FAM50AQ14320 339 aaKnown RBP14.7□□□□□ -0.06
LINC01560-202ENST00000624822 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
LINC01560-202ENST00000624822 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
LINC01560-202ENST00000624822 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
LINC01560-202ENST00000624822 MLECQ14165 292 aa14.68□□□□□ -0.06
LINC01560-202ENST00000624822 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
LINC01560-202ENST00000624822 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
LINC01560-202ENST00000624822 ADAMTSL3P82987 1691 aa14.67□□□□□ -0.06
LINC01560-202ENST00000624822 RIMS1Q86UR5 1692 aaKnown RBP14.67□□□□□ -0.06
LINC01560-202ENST00000624822 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
LINC01560-202ENST00000624822 DAPK1P53355 1430 aa14.66□□□□□ -0.06
LINC01560-202ENST00000624822 A2MP01023 1474 aa14.65□□□□□ -0.06
LINC01560-202ENST00000624822 PLXNC1O60486 1568 aa14.64□□□□□ -0.07
LINC01560-202ENST00000624822 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
LINC01560-202ENST00000624822 ABCC5O15440 1437 aa14.63□□□□□ -0.07
LINC01560-202ENST00000624822 AGLP35573 1532 aa14.62□□□□□ -0.07
LINC01560-202ENST00000624822 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
LINC01560-202ENST00000624822 ITGAEP38570 1179 aa14.59□□□□□ -0.07
LINC01560-202ENST00000624822 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
LINC01560-202ENST00000624822 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
LINC01560-202ENST00000624822 EIF2AK4Q9P2K8 1649 aaKnown RBP14.58□□□□□ -0.08
LINC01560-202ENST00000624822 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.08
LINC01560-202ENST00000624822 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
LINC01560-202ENST00000624822 DUOX2Q9NRD8 1548 aa14.57□□□□□ -0.08
LINC01560-202ENST00000624822 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
LINC01560-202ENST00000624822 GGT6Q6P531 493 aa14.56□□□□□ -0.08
LINC01560-202ENST00000624822 RRP7BPQ9NSQ0 103 aa14.56□□□□□ -0.08
LINC01560-202ENST00000624822 KIF15Q9NS87 1388 aa14.56□□□□□ -0.08
LINC01560-202ENST00000624822 PTPRMP28827 1452 aa14.56□□□□□ -0.08
LINC01560-202ENST00000624822 KIF3BO15066 747 aa14.55□□□□□ -0.08
LINC01560-202ENST00000624822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
LINC01560-202ENST00000624822 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
LINC01560-202ENST00000624822 ADGRL2O95490 1459 aa14.54□□□□□ -0.08
LINC01560-202ENST00000624822 MROH2AA6NES4 1674 aa14.54□□□□□ -0.08
LINC01560-202ENST00000624822 C3P01024 1663 aa14.54□□□□□ -0.08
LINC01560-202ENST00000624822 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
LINC01560-202ENST00000624822 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.08
LINC01560-202ENST00000624822 CEP152O94986 1710 aa14.52□□□□□ -0.09
LINC01560-202ENST00000624822 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
LINC01560-202ENST00000624822 NCOA1Q15788 1441 aa14.51□□□□□ -0.09
LINC01560-202ENST00000624822 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
LINC01560-202ENST00000624822 ZC3H13Q5T200 1668 aaKnown RBP14.5□□□□□ -0.09
LINC01560-202ENST00000624822 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
LINC01560-202ENST00000624822 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
LINC01560-202ENST00000624822 GCC2Q8IWJ2 1684 aa14.48□□□□□ -0.09
LINC01560-202ENST00000624822 DEPDC5O75140 1603 aa14.48□□□□□ -0.09
LINC01560-202ENST00000624822 MROH1Q8NDA8 1641 aa14.47□□□□□ -0.09
LINC01560-202ENST00000624822 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
LINC01560-202ENST00000624822 CFAP65Q6ZU64 1925 aaKnown RBP14.47□□□□□ -0.09
LINC01560-202ENST00000624822 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.09
LINC01560-202ENST00000624822 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
LINC01560-202ENST00000624822 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
LINC01560-202ENST00000624822 PRDM15P57071 1507 aaPredicted RBP14.46□□□□□ -0.1
LINC01560-202ENST00000624822 PREX1Q8TCU6 1659 aa14.46□□□□□ -0.1
LINC01560-202ENST00000624822 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
LINC01560-202ENST00000624822 CAMSAP1Q5T5Y3 1602 aa14.45□□□□□ -0.1
LINC01560-202ENST00000624822 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
LINC01560-202ENST00000624822 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
LINC01560-202ENST00000624822 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
LINC01560-202ENST00000624822 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
LINC01560-202ENST00000624822 KANK1Q14678 1352 aa14.43□□□□□ -0.1
LINC01560-202ENST00000624822 ABCC3O15438 1527 aa14.42□□□□□ -0.1
LINC01560-202ENST00000624822 UNC13BO14795 1591 aa14.42□□□□□ -0.1
LINC01560-202ENST00000624822 MYO3AQ8NEV4 1616 aa14.38□□□□□ -0.11
LINC01560-202ENST00000624822 PZPP20742 1482 aa14.38□□□□□ -0.11
LINC01560-202ENST00000624822 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
LINC01560-202ENST00000624822 NAIPQ13075 1403 aa14.37□□□□□ -0.11
LINC01560-202ENST00000624822 UHRF1BP1Q6BDS2 1440 aa14.37□□□□□ -0.11
LINC01560-202ENST00000624822 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
LINC01560-202ENST00000624822 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
LINC01560-202ENST00000624822 TET3O43151 1660 aa14.36□□□□□ -0.11
LINC01560-202ENST00000624822 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
LINC01560-202ENST00000624822 NPATQ14207 1427 aa14.36□□□□□ -0.11
LINC01560-202ENST00000624822 LMTK3Q96Q04 1460 aa14.35□□□□□ -0.11
LINC01560-202ENST00000624822 ZNF142P52746 1687 aaPredicted RBP14.34□□□□□ -0.11
LINC01560-202ENST00000624822 EFCAB6Q5THR3 1501 aa14.34□□□□□ -0.11
LINC01560-202ENST00000624822 LMTK2Q8IWU2 1503 aa14.34□□□□□ -0.11
LINC01560-202ENST00000624822 FBXO31Q5XUX0 539 aaPredicted RBP14.33□□□□□ -0.12
LINC01560-202ENST00000624822 E9PCH4 1651 aa14.33□□□□□ -0.12
LINC01560-202ENST00000624822 NUP155O75694 1391 aa14.32□□□□□ -0.12
LINC01560-202ENST00000624822 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
LINC01560-202ENST00000624822 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
LINC01560-202ENST00000624822 TNRQ92752 1358 aa14.31□□□□□ -0.12
LINC01560-202ENST00000624822 ERVK-7P63135 1459 aa14.31□□□□□ -0.12
LINC01560-202ENST00000624822 TRIM52Q96A61 297 aa14.3□□□□□ -0.12
LINC01560-202ENST00000624822 ARHGAP31Q2M1Z3 1444 aa14.3□□□□□ -0.12
LINC01560-202ENST00000624822 HSPA2P54652 639 aa14.29□□□□□ -0.12
LINC01560-202ENST00000624822 SPHKAPQ2M3C7 1700 aa14.27□□□□□ -0.12
LINC01560-202ENST00000624822 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
LINC01560-202ENST00000624822 RPRD2Q5VT52 1461 aaKnown RBP14.26□□□□□ -0.13
LINC01560-202ENST00000624822 SETD5Q9C0A6 1442 aa14.26□□□□□ -0.13
LINC01560-202ENST00000624822 NLRP1Q9C000 1473 aa14.25□□□□□ -0.13
LINC01560-202ENST00000624822 PIK3C2BO00750 1634 aa14.25□□□□□ -0.13
LINC01560-202ENST00000624822 SYNMO15061 1565 aa14.25□□□□□ -0.13
LINC01560-202ENST00000624822 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms