RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 ANKRD50Q9ULJ7 1429 aa23.41■■□□□ 1.34
SMIM11B-206ENST00000624534 ESF1Q9H501 851 aaKnown RBP23.4■■□□□ 1.34
SMIM11B-206ENST00000624534 GCC2Q8IWJ2 1684 aa23.4■■□□□ 1.34
SMIM11B-206ENST00000624534 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
SMIM11B-206ENST00000624534 GGT6Q6P531 493 aa23.39■■□□□ 1.33
SMIM11B-206ENST00000624534 DEPDC5O75140 1603 aa23.38■■□□□ 1.33
SMIM11B-206ENST00000624534 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
SMIM11B-206ENST00000624534 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
SMIM11B-206ENST00000624534 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
SMIM11B-206ENST00000624534 HFM1A2PYH4 1435 aa23.34■■□□□ 1.33
SMIM11B-206ENST00000624534 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
SMIM11B-206ENST00000624534 PTPRMP28827 1452 aa23.34■■□□□ 1.33
SMIM11B-206ENST00000624534 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
SMIM11B-206ENST00000624534 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
SMIM11B-206ENST00000624534 NAIPQ13075 1403 aa23.32■■□□□ 1.32
SMIM11B-206ENST00000624534 KANK1Q14678 1352 aa23.3■■□□□ 1.32
SMIM11B-206ENST00000624534 UNC13BO14795 1591 aa23.3■■□□□ 1.32
SMIM11B-206ENST00000624534 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
SMIM11B-206ENST00000624534 C3P01024 1663 aa23.28■■□□□ 1.32
SMIM11B-206ENST00000624534 CEP152O94986 1710 aa23.28■■□□□ 1.32
SMIM11B-206ENST00000624534 ABCC3O15438 1527 aa23.27■■□□□ 1.32
SMIM11B-206ENST00000624534 SETD1BQ9UPS6 1966 aaKnown RBP23.26■■□□□ 1.31
SMIM11B-206ENST00000624534 VWDEQ8N2E2 1590 aa23.26■■□□□ 1.31
SMIM11B-206ENST00000624534 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
SMIM11B-206ENST00000624534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.31
SMIM11B-206ENST00000624534 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
SMIM11B-206ENST00000624534 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
SMIM11B-206ENST00000624534 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
SMIM11B-206ENST00000624534 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
SMIM11B-206ENST00000624534 PZPP20742 1482 aa23.18■■□□□ 1.3
SMIM11B-206ENST00000624534 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
SMIM11B-206ENST00000624534 TET3O43151 1660 aa23.18■■□□□ 1.3
SMIM11B-206ENST00000624534 NPATQ14207 1427 aa23.17■■□□□ 1.3
SMIM11B-206ENST00000624534 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
SMIM11B-206ENST00000624534 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
SMIM11B-206ENST00000624534 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
SMIM11B-206ENST00000624534 NUP155O75694 1391 aa23.15■■□□□ 1.3
SMIM11B-206ENST00000624534 CFAP65Q6ZU64 1925 aaKnown RBP23.15■■□□□ 1.3
SMIM11B-206ENST00000624534 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
SMIM11B-206ENST00000624534 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
SMIM11B-206ENST00000624534 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
SMIM11B-206ENST00000624534 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
SMIM11B-206ENST00000624534 SPATA31D1Q6ZQQ2 1576 aa23.09■■□□□ 1.29
SMIM11B-206ENST00000624534 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
SMIM11B-206ENST00000624534 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
SMIM11B-206ENST00000624534 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
SMIM11B-206ENST00000624534 HRCP23327 699 aa23.07■■□□□ 1.28
SMIM11B-206ENST00000624534 E9PCH4 1651 aa23.06■■□□□ 1.28
SMIM11B-206ENST00000624534 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
SMIM11B-206ENST00000624534 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
SMIM11B-206ENST00000624534 TNRQ92752 1358 aa23.04■■□□□ 1.28
SMIM11B-206ENST00000624534 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
SMIM11B-206ENST00000624534 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
SMIM11B-206ENST00000624534 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
SMIM11B-206ENST00000624534 NOS1P29475 1434 aa22.99■■□□□ 1.27
SMIM11B-206ENST00000624534 LMTK3Q96Q04 1460 aa22.99■■□□□ 1.27
SMIM11B-206ENST00000624534 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
SMIM11B-206ENST00000624534 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
SMIM11B-206ENST00000624534 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
SMIM11B-206ENST00000624534 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
SMIM11B-206ENST00000624534 SYNMO15061 1565 aa22.95■■□□□ 1.26
SMIM11B-206ENST00000624534 PKD2Q13563 968 aa22.93■■□□□ 1.26
SMIM11B-206ENST00000624534 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
SMIM11B-206ENST00000624534 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
SMIM11B-206ENST00000624534 KDM5AP29375 1690 aaKnown RBP22.92■■□□□ 1.26
SMIM11B-206ENST00000624534 PTPRTO14522 1441 aa22.91■■□□□ 1.26
SMIM11B-206ENST00000624534 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
SMIM11B-206ENST00000624534 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.26
SMIM11B-206ENST00000624534 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
SMIM11B-206ENST00000624534 TRPM2O94759 1503 aa22.88■■□□□ 1.25
SMIM11B-206ENST00000624534 IDI1Q13907 227 aa22.85■■□□□ 1.25
SMIM11B-206ENST00000624534 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
SMIM11B-206ENST00000624534 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
SMIM11B-206ENST00000624534 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
SMIM11B-206ENST00000624534 KIF1BO60333 1816 aa22.83■■□□□ 1.25
SMIM11B-206ENST00000624534 HSPA2P54652 639 aa22.82■■□□□ 1.24
SMIM11B-206ENST00000624534 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
SMIM11B-206ENST00000624534 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
SMIM11B-206ENST00000624534 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
SMIM11B-206ENST00000624534 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
SMIM11B-206ENST00000624534 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
SMIM11B-206ENST00000624534 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
SMIM11B-206ENST00000624534 FOXD1Q16676 465 aa22.78■■□□□ 1.24
SMIM11B-206ENST00000624534 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
SMIM11B-206ENST00000624534 CCDC144AA2RUR9 1427 aa22.76■■□□□ 1.23
SMIM11B-206ENST00000624534 SLIT1O75093 1534 aa22.76■■□□□ 1.23
SMIM11B-206ENST00000624534 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
SMIM11B-206ENST00000624534 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
SMIM11B-206ENST00000624534 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
SMIM11B-206ENST00000624534 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
SMIM11B-206ENST00000624534 TMEM2Q9UHN6 1383 aa22.72■■□□□ 1.23
SMIM11B-206ENST00000624534 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
SMIM11B-206ENST00000624534 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
SMIM11B-206ENST00000624534 EID1Q9Y6B2 187 aa22.7■■□□□ 1.22
SMIM11B-206ENST00000624534 NEURL4Q96JN8 1562 aa22.7■■□□□ 1.22
SMIM11B-206ENST00000624534 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
SMIM11B-206ENST00000624534 DHX57Q6P158 1386 aaKnown RBP22.66■■□□□ 1.22
SMIM11B-206ENST00000624534 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
SMIM11B-206ENST00000624534 MED14O60244 1454 aa22.66■■□□□ 1.22
SMIM11B-206ENST00000624534 NCKAP5LQ9HCH0 1330 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms