RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, human

Gene LINC01006, Length 651 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-208	ENST00000624071	CLTC	Q00610	1675 aa	Known RBP	29.15	■■■□□ 2.26
LINC01006-208	ENST00000624071	HSPA2	P54652	639 aa		29.15	■■■□□ 2.26
LINC01006-208	ENST00000624071	PTPRK	Q15262	1439 aa		29.14	■■■□□ 2.26
LINC01006-208	ENST00000624071	NCOA1	Q15788	1441 aa		29.14	■■■□□ 2.26
LINC01006-208	ENST00000624071	ERBIN	Q96RT1	1412 aa		29.1	■■■□□ 2.25
LINC01006-208	ENST00000624071	ADGRL2	O95490	1459 aa		29.09	■■■□□ 2.25
LINC01006-208	ENST00000624071	MROH2A	A6NES4	1674 aa		29.09	■■■□□ 2.25
LINC01006-208	ENST00000624071	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	29.08	■■■□□ 2.25
LINC01006-208	ENST00000624071	KDM5D	Q9BY66	1539 aa		29.08	■■■□□ 2.25
LINC01006-208	ENST00000624071	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.06	■■■□□ 2.24
LINC01006-208	ENST00000624071	UHRF1BP1	Q6BDS2	1440 aa		29.06	■■■□□ 2.24
LINC01006-208	ENST00000624071	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.06	■■■□□ 2.24
LINC01006-208	ENST00000624071	RNF17	Q9BXT8	1623 aa	Known RBP	29.05	■■■□□ 2.24
LINC01006-208	ENST00000624071	NPAT	Q14207	1427 aa		29.04	■■■□□ 2.24
LINC01006-208	ENST00000624071	RRBP1	Q9P2E9	1410 aa	Known RBP	29.04	■■■□□ 2.24
LINC01006-208	ENST00000624071	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.04	■■■□□ 2.24
LINC01006-208	ENST00000624071	MROH1	Q8NDA8	1641 aa		29.01	■■■□□ 2.23
LINC01006-208	ENST00000624071	PREX1	Q8TCU6	1659 aa		29	■■■□□ 2.23
LINC01006-208	ENST00000624071	ABCC3	O15438	1527 aa		28.99	■■■□□ 2.23
LINC01006-208	ENST00000624071	FAM135A	Q9P2D6	1515 aa		28.99	■■■□□ 2.23
LINC01006-208	ENST00000624071	ANKRD50	Q9ULJ7	1429 aa		28.98	■■■□□ 2.23
LINC01006-208	ENST00000624071	ROCK1	Q13464	1354 aa		28.98	■■■□□ 2.23
LINC01006-208	ENST00000624071	PZP	P20742	1482 aa		28.96	■■■□□ 2.23
LINC01006-208	ENST00000624071	KANK1	Q14678	1352 aa		28.94	■■■□□ 2.22
LINC01006-208	ENST00000624071	PRDM15	P57071	1507 aa	Predicted RBP	28.93	■■■□□ 2.22
LINC01006-208	ENST00000624071	TNR	Q92752	1358 aa		28.92	■■■□□ 2.22
LINC01006-208	ENST00000624071	SETD1B	Q9UPS6	1966 aa	Known RBP	28.92	■■■□□ 2.22
LINC01006-208	ENST00000624071	ZC3H13	Q5T200	1668 aa	Known RBP	28.88	■■■□□ 2.21
LINC01006-208	ENST00000624071	DEPDC5	O75140	1603 aa		28.87	■■■□□ 2.21
LINC01006-208	ENST00000624071	CEP152	O94986	1710 aa		28.87	■■■□□ 2.21
LINC01006-208	ENST00000624071	MYO3A	Q8NEV4	1616 aa		28.84	■■■□□ 2.21
LINC01006-208	ENST00000624071	CAMSAP1	Q5T5Y3	1602 aa		28.83	■■■□□ 2.21
LINC01006-208	ENST00000624071	ERVK-7	P63135	1459 aa		28.82	■■■□□ 2.2
LINC01006-208	ENST00000624071	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.81	■■■□□ 2.2
LINC01006-208	ENST00000624071	VWDE	Q8N2E2	1590 aa		28.8	■■■□□ 2.2
LINC01006-208	ENST00000624071	A2ML1	A8K2U0	1454 aa		28.79	■■■□□ 2.2
LINC01006-208	ENST00000624071	ARHGAP31	Q2M1Z3	1444 aa		28.79	■■■□□ 2.2
LINC01006-208	ENST00000624071	LMTK2	Q8IWU2	1503 aa		28.78	■■■□□ 2.2
LINC01006-208	ENST00000624071	SPATA31D1	Q6ZQQ2	1576 aa		28.77	■■■□□ 2.2
LINC01006-208	ENST00000624071	NCKAP5L	Q9HCH0	1330 aa		28.75	■■■□□ 2.19
LINC01006-208	ENST00000624071	NAIP	Q13075	1403 aa		28.74	■■■□□ 2.19
LINC01006-208	ENST00000624071	NUP155	O75694	1391 aa		28.74	■■■□□ 2.19
LINC01006-208	ENST00000624071	ZNF142	P52746	1687 aa	Predicted RBP	28.74	■■■□□ 2.19
LINC01006-208	ENST00000624071	NLRP1	Q9C000	1473 aa		28.73	■■■□□ 2.19
LINC01006-208	ENST00000624071	UNC13B	O14795	1591 aa		28.72	■■■□□ 2.19
LINC01006-208	ENST00000624071	DMRT2	Q9Y5R5	561 aa		28.71	■■■□□ 2.19
LINC01006-208	ENST00000624071	EFCAB6	Q5THR3	1501 aa		28.7	■■■□□ 2.19
LINC01006-208	ENST00000624071	STRC	Q7RTU9	1775 aa		28.7	■■■□□ 2.18
LINC01006-208	ENST00000624071	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.68	■■■□□ 2.18
LINC01006-208	ENST00000624071	CFAP65	Q6ZU64	1925 aa	Known RBP	28.67	■■■□□ 2.18
LINC01006-208	ENST00000624071	HFM1	A2PYH4	1435 aa		28.66	■■■□□ 2.18
LINC01006-208	ENST00000624071	UGGT1	Q9NYU2	1555 aa		28.66	■■■□□ 2.18
LINC01006-208	ENST00000624071	PLA2R1	Q13018	1463 aa		28.66	■■■□□ 2.18
LINC01006-208	ENST00000624071	PKD2	Q13563	968 aa		28.64	■■■□□ 2.18
LINC01006-208	ENST00000624071	PTPRT	O14522	1441 aa		28.62	■■■□□ 2.17
LINC01006-208	ENST00000624071	NOS1	P29475	1434 aa		28.62	■■■□□ 2.17
LINC01006-208	ENST00000624071	IDI1	Q13907	227 aa		28.62	■■■□□ 2.17
LINC01006-208	ENST00000624071	TET3	O43151	1660 aa		28.61	■■■□□ 2.17
LINC01006-208	ENST00000624071	TRIM52	Q96A61	297 aa		28.61	■■■□□ 2.17
LINC01006-208	ENST00000624071	IQGAP3	Q86VI3	1631 aa		28.6	■■■□□ 2.17
LINC01006-208	ENST00000624071	RPRD2	Q5VT52	1461 aa	Known RBP	28.59	■■■□□ 2.17
LINC01006-208	ENST00000624071	GCC2	Q8IWJ2	1684 aa		28.59	■■■□□ 2.17
LINC01006-208	ENST00000624071	ANKLE2	Q86XL3	938 aa		28.59	■■■□□ 2.17
LINC01006-208	ENST00000624071	STAG3	Q9UJ98	1225 aa		28.59	■■■□□ 2.17
LINC01006-208	ENST00000624071	SYNM	O15061	1565 aa		28.58	■■■□□ 2.17
LINC01006-208	ENST00000624071	SLC52A1	Q9NWF4	448 aa		28.54	■■■□□ 2.16
LINC01006-208	ENST00000624071	PIK3C2B	O00750	1634 aa		28.52	■■■□□ 2.16
LINC01006-208	ENST00000624071		E9PCH4	1651 aa		28.51	■■■□□ 2.16
LINC01006-208	ENST00000624071	UBR1	Q8IWV7	1749 aa		28.49	■■■□□ 2.15
LINC01006-208	ENST00000624071	CHGA	P10645	457 aa	Known RBP	28.48	■■■□□ 2.15
LINC01006-208	ENST00000624071	TXNDC2	Q86VQ3	553 aa		28.48	■■■□□ 2.15
LINC01006-208	ENST00000624071	NEURL4	Q96JN8	1562 aa		28.47	■■■□□ 2.15
LINC01006-208	ENST00000624071	LTK	P29376	864 aa		28.47	■■■□□ 2.15
LINC01006-208	ENST00000624071	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.46	■■■□□ 2.15
LINC01006-208	ENST00000624071	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.45	■■■□□ 2.15
LINC01006-208	ENST00000624071	NPHP4	O75161	1426 aa	Predicted RBP	28.45	■■■□□ 2.15
LINC01006-208	ENST00000624071	TMEM2	Q9UHN6	1383 aa		28.45	■■■□□ 2.14
LINC01006-208	ENST00000624071	CERK	Q8TCT0	537 aa		28.44	■■■□□ 2.14
LINC01006-208	ENST00000624071	EID1	Q9Y6B2	187 aa		28.44	■■■□□ 2.14
LINC01006-208	ENST00000624071	ARHGAP23	Q9P227	1491 aa		28.43	■■■□□ 2.14
LINC01006-208	ENST00000624071	SETD5	Q9C0A6	1442 aa		28.43	■■■□□ 2.14
LINC01006-208	ENST00000624071	ADGRB3	O60242	1522 aa		28.42	■■■□□ 2.14
LINC01006-208	ENST00000624071	SCAF11	Q99590	1463 aa	Known RBP	28.41	■■■□□ 2.14
LINC01006-208	ENST00000624071	POLR1A	O95602	1720 aa	Predicted RBP	28.41	■■■□□ 2.14
LINC01006-208	ENST00000624071	SLIT1	O75093	1534 aa		28.41	■■■□□ 2.14
LINC01006-208	ENST00000624071	MED14	O60244	1454 aa		28.4	■■■□□ 2.14
LINC01006-208	ENST00000624071	ILDR1	Q86SU0	546 aa	Predicted RBP	28.38	■■■□□ 2.13
LINC01006-208	ENST00000624071	FOXD1	Q16676	465 aa		28.36	■■■□□ 2.13
LINC01006-208	ENST00000624071	SENP3	Q9H4L4	574 aa	Predicted RBP	28.36	■■■□□ 2.13
LINC01006-208	ENST00000624071	LTBP4	Q8N2S1	1624 aa		28.35	■■■□□ 2.13
LINC01006-208	ENST00000624071	RAB3GAP2	Q9H2M9	1393 aa		28.35	■■■□□ 2.13
LINC01006-208	ENST00000624071	MPHOSPH9	Q99550	1183 aa		28.34	■■■□□ 2.13
LINC01006-208	ENST00000624071	KDM5A	P29375	1690 aa	Known RBP	28.32	■■■□□ 2.12
LINC01006-208	ENST00000624071	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.31	■■■□□ 2.12
LINC01006-208	ENST00000624071	RIMS2	Q9UQ26	1411 aa		28.31	■■■□□ 2.12
LINC01006-208	ENST00000624071	TMEM131L	A2VDJ0	1609 aa		28.31	■■■□□ 2.12
LINC01006-208	ENST00000624071	IQGAP1	P46940	1657 aa		28.3	■■■□□ 2.12
LINC01006-208	ENST00000624071	BCAN	Q96GW7	911 aa		28.3	■■■□□ 2.12
LINC01006-208	ENST00000624071	SPHKAP	Q2M3C7	1700 aa		28.29	■■■□□ 2.12
LINC01006-208	ENST00000624071	PPP1R15A	O75807	674 aa	Predicted RBP	28.29	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms