RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 KIDINS220Q9ULH0 1771 aa12.59□□□□□ -0.39
SOX9-AS1-217ENST00000623935 ZMYM4Q5VZL5 1548 aa12.58□□□□□ -0.4
SOX9-AS1-217ENST00000623935 ERBINQ96RT1 1412 aa12.58□□□□□ -0.4
SOX9-AS1-217ENST00000623935 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
SOX9-AS1-217ENST00000623935 KDM6BO15054 1643 aa12.56□□□□□ -0.4
SOX9-AS1-217ENST00000623935 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
SOX9-AS1-217ENST00000623935 A2MP01023 1474 aa12.55□□□□□ -0.4
SOX9-AS1-217ENST00000623935 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
SOX9-AS1-217ENST00000623935 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
SOX9-AS1-217ENST00000623935 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
SOX9-AS1-217ENST00000623935 EIF2AK4Q9P2K8 1649 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-217ENST00000623935 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-217ENST00000623935 KIF3BO15066 747 aa12.52□□□□□ -0.4
SOX9-AS1-217ENST00000623935 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
SOX9-AS1-217ENST00000623935 NUP155O75694 1391 aa12.52□□□□□ -0.41
SOX9-AS1-217ENST00000623935 ATP10AO60312 1499 aa12.52□□□□□ -0.41
SOX9-AS1-217ENST00000623935 YEATS2Q9ULM3 1422 aa12.52□□□□□ -0.41
SOX9-AS1-217ENST00000623935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
SOX9-AS1-217ENST00000623935 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
SOX9-AS1-217ENST00000623935 KANK1Q14678 1352 aa12.51□□□□□ -0.41
SOX9-AS1-217ENST00000623935 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-217ENST00000623935 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
SOX9-AS1-217ENST00000623935 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
SOX9-AS1-217ENST00000623935 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
SOX9-AS1-217ENST00000623935 UNC13BO14795 1591 aa12.49□□□□□ -0.41
SOX9-AS1-217ENST00000623935 ARHGEF40Q8TER5 1519 aa12.49□□□□□ -0.41
SOX9-AS1-217ENST00000623935 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
SOX9-AS1-217ENST00000623935 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
SOX9-AS1-217ENST00000623935 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
SOX9-AS1-217ENST00000623935 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
SOX9-AS1-217ENST00000623935 GGT6Q6P531 493 aa12.47□□□□□ -0.41
SOX9-AS1-217ENST00000623935 DEPDC5O75140 1603 aa12.46□□□□□ -0.41
SOX9-AS1-217ENST00000623935 BCORL1Q5H9F3 1711 aa12.46□□□□□ -0.42
SOX9-AS1-217ENST00000623935 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
SOX9-AS1-217ENST00000623935 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
SOX9-AS1-217ENST00000623935 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
SOX9-AS1-217ENST00000623935 RNF17Q9BXT8 1623 aaKnown RBP12.44□□□□□ -0.42
SOX9-AS1-217ENST00000623935 PZPP20742 1482 aa12.44□□□□□ -0.42
SOX9-AS1-217ENST00000623935 AGLP35573 1532 aa12.44□□□□□ -0.42
SOX9-AS1-217ENST00000623935 PRDM15P57071 1507 aaPredicted RBP12.44□□□□□ -0.42
SOX9-AS1-217ENST00000623935 PKD2Q13563 968 aa12.43□□□□□ -0.42
SOX9-AS1-217ENST00000623935 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
SOX9-AS1-217ENST00000623935 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
SOX9-AS1-217ENST00000623935 MLECQ14165 292 aa12.39□□□□□ -0.43
SOX9-AS1-217ENST00000623935 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
SOX9-AS1-217ENST00000623935 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
SOX9-AS1-217ENST00000623935 TET3O43151 1660 aa12.39□□□□□ -0.43
SOX9-AS1-217ENST00000623935 ZC3H13Q5T200 1668 aaKnown RBP12.39□□□□□ -0.43
SOX9-AS1-217ENST00000623935 LMTK2Q8IWU2 1503 aa12.38□□□□□ -0.43
SOX9-AS1-217ENST00000623935 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
SOX9-AS1-217ENST00000623935 CEP152O94986 1710 aa12.37□□□□□ -0.43
SOX9-AS1-217ENST00000623935 ABCC3O15438 1527 aa12.36□□□□□ -0.43
SOX9-AS1-217ENST00000623935 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
SOX9-AS1-217ENST00000623935 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
SOX9-AS1-217ENST00000623935 RPRD2Q5VT52 1461 aaKnown RBP12.35□□□□□ -0.43
SOX9-AS1-217ENST00000623935 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
SOX9-AS1-217ENST00000623935 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
SOX9-AS1-217ENST00000623935 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
SOX9-AS1-217ENST00000623935 E9PCH4 1651 aa12.34□□□□□ -0.43
SOX9-AS1-217ENST00000623935 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
SOX9-AS1-217ENST00000623935 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
SOX9-AS1-217ENST00000623935 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
SOX9-AS1-217ENST00000623935 ARHGAP31Q2M1Z3 1444 aa12.32□□□□□ -0.44
SOX9-AS1-217ENST00000623935 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
SOX9-AS1-217ENST00000623935 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
SOX9-AS1-217ENST00000623935 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
SOX9-AS1-217ENST00000623935 NPATQ14207 1427 aa12.3□□□□□ -0.44
SOX9-AS1-217ENST00000623935 TRPM2O94759 1503 aa12.29□□□□□ -0.44
SOX9-AS1-217ENST00000623935 PTPRTO14522 1441 aa12.28□□□□□ -0.44
SOX9-AS1-217ENST00000623935 ZMYM3Q14202 1370 aa12.28□□□□□ -0.44
SOX9-AS1-217ENST00000623935 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
SOX9-AS1-217ENST00000623935 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
SOX9-AS1-217ENST00000623935 MROH2AA6NES4 1674 aa12.27□□□□□ -0.45
SOX9-AS1-217ENST00000623935 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
SOX9-AS1-217ENST00000623935 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
SOX9-AS1-217ENST00000623935 PREX1Q8TCU6 1659 aa12.25□□□□□ -0.45
SOX9-AS1-217ENST00000623935 NOS1P29475 1434 aa12.25□□□□□ -0.45
SOX9-AS1-217ENST00000623935 KIF1BO60333 1816 aa12.23□□□□□ -0.45
SOX9-AS1-217ENST00000623935 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
SOX9-AS1-217ENST00000623935 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
SOX9-AS1-217ENST00000623935 CLTCL1P53675 1640 aa12.23□□□□□ -0.45
SOX9-AS1-217ENST00000623935 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
SOX9-AS1-217ENST00000623935 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
SOX9-AS1-217ENST00000623935 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
SOX9-AS1-217ENST00000623935 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
SOX9-AS1-217ENST00000623935 MADDQ8WXG6 1647 aa12.21□□□□□ -0.45
SOX9-AS1-217ENST00000623935 SPATA31D1Q6ZQQ2 1576 aa12.21□□□□□ -0.46
SOX9-AS1-217ENST00000623935 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.46
SOX9-AS1-217ENST00000623935 ADAMTSL3P82987 1691 aa12.21□□□□□ -0.46
SOX9-AS1-217ENST00000623935 SYNMO15061 1565 aa12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 C3P01024 1663 aa12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 UGGT1Q9NYU2 1555 aa12.2□□□□□ -0.46
SOX9-AS1-217ENST00000623935 TNRQ92752 1358 aa12.19□□□□□ -0.46
SOX9-AS1-217ENST00000623935 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
SOX9-AS1-217ENST00000623935 CEBPAP49715 358 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms