RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 SHANK2Q9UPX8 1470 aa24.99■■□□□ 1.59
DDB2-216ENST00000622878 RNF17Q9BXT8 1623 aaKnown RBP24.98■■□□□ 1.59
DDB2-216ENST00000622878 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
DDB2-216ENST00000622878 DNMT1P26358 1616 aaKnown RBP24.97■■□□□ 1.59
DDB2-216ENST00000622878 MYO3AQ8NEV4 1616 aa24.97■■□□□ 1.59
DDB2-216ENST00000622878 ZNF142P52746 1687 aaPredicted RBP24.96■■□□□ 1.59
DDB2-216ENST00000622878 DAPK1P53355 1430 aa24.95■■□□□ 1.58
DDB2-216ENST00000622878 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
DDB2-216ENST00000622878 NCOA1Q15788 1441 aa24.93■■□□□ 1.58
DDB2-216ENST00000622878 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
DDB2-216ENST00000622878 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
DDB2-216ENST00000622878 PZPP20742 1482 aa24.92■■□□□ 1.58
DDB2-216ENST00000622878 DMRT2Q9Y5R5 561 aa24.91■■□□□ 1.58
DDB2-216ENST00000622878 CEP170BQ9Y4F5 1589 aaPredicted RBP24.91■■□□□ 1.58
DDB2-216ENST00000622878 CAMSAP1Q5T5Y3 1602 aa24.9■■□□□ 1.58
DDB2-216ENST00000622878 PTPRTO14522 1441 aa24.89■■□□□ 1.58
DDB2-216ENST00000622878 KIF15Q9NS87 1388 aa24.89■■□□□ 1.57
DDB2-216ENST00000622878 ABCC3O15438 1527 aa24.88■■□□□ 1.57
DDB2-216ENST00000622878 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
DDB2-216ENST00000622878 ZC3H13Q5T200 1668 aaKnown RBP24.88■■□□□ 1.57
DDB2-216ENST00000622878 FBXO41Q8TF61 875 aa24.86■■□□□ 1.57
DDB2-216ENST00000622878 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
DDB2-216ENST00000622878 A2ML1A8K2U0 1454 aa24.84■■□□□ 1.57
DDB2-216ENST00000622878 TNRQ92752 1358 aa24.84■■□□□ 1.57
DDB2-216ENST00000622878 RRP7BPQ9NSQ0 103 aa24.84■■□□□ 1.57
DDB2-216ENST00000622878 PLA2R1Q13018 1463 aa24.83■■□□□ 1.57
DDB2-216ENST00000622878 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
DDB2-216ENST00000622878 CEP152O94986 1710 aa24.81■■□□□ 1.56
DDB2-216ENST00000622878 DEPDC5O75140 1603 aa24.81■■□□□ 1.56
DDB2-216ENST00000622878 CERKQ8TCT0 537 aa24.8■■□□□ 1.56
DDB2-216ENST00000622878 ADGRL2O95490 1459 aa24.8■■□□□ 1.56
DDB2-216ENST00000622878 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
DDB2-216ENST00000622878 CHIC2Q9UKJ5 165 aa24.79■■□□□ 1.56
DDB2-216ENST00000622878 SPATA31D1Q6ZQQ2 1576 aa24.78■■□□□ 1.56
DDB2-216ENST00000622878 NCKAP5LQ9HCH0 1330 aa24.78■■□□□ 1.56
DDB2-216ENST00000622878 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
DDB2-216ENST00000622878 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
DDB2-216ENST00000622878 PKD2Q13563 968 aa24.75■■□□□ 1.55
DDB2-216ENST00000622878 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
DDB2-216ENST00000622878 LTBP4Q8N2S1 1624 aa24.73■■□□□ 1.55
DDB2-216ENST00000622878 ARHGAP31Q2M1Z3 1444 aa24.72■■□□□ 1.55
DDB2-216ENST00000622878 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
DDB2-216ENST00000622878 CFAP65Q6ZU64 1925 aaKnown RBP24.71■■□□□ 1.55
DDB2-216ENST00000622878 UGGT1Q9NYU2 1555 aa24.68■■□□□ 1.54
DDB2-216ENST00000622878 LMTK2Q8IWU2 1503 aa24.68■■□□□ 1.54
DDB2-216ENST00000622878 POLR1AO95602 1720 aaPredicted RBP24.68■■□□□ 1.54
DDB2-216ENST00000622878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.541e-8■■■■□ 21.3
DDB2-216ENST00000622878 NEURL4Q96JN8 1562 aa24.67■■□□□ 1.54
DDB2-216ENST00000622878 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
DDB2-216ENST00000622878 THEMISQ8N1K5 641 aaPredicted RBP24.65■■□□□ 1.54
DDB2-216ENST00000622878 KANK1Q14678 1352 aa24.65■■□□□ 1.54
DDB2-216ENST00000622878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.65■■□□□ 1.54
DDB2-216ENST00000622878 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
DDB2-216ENST00000622878 UBR1Q8IWV7 1749 aa24.61■■□□□ 1.53
DDB2-216ENST00000622878 ROCK1Q13464 1354 aa24.61■■□□□ 1.53
DDB2-216ENST00000622878 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
DDB2-216ENST00000622878 MED14O60244 1454 aa24.59■■□□□ 1.53
DDB2-216ENST00000622878 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
DDB2-216ENST00000622878 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.53
DDB2-216ENST00000622878 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
DDB2-216ENST00000622878 UNC13BO14795 1591 aa24.54■■□□□ 1.52
DDB2-216ENST00000622878 NOS1P29475 1434 aa24.53■■□□□ 1.52
DDB2-216ENST00000622878 SYNMO15061 1565 aa24.53■■□□□ 1.52
DDB2-216ENST00000622878 PIK3C2BO00750 1634 aa24.53■■□□□ 1.52
DDB2-216ENST00000622878 NPHP4O75161 1426 aaPredicted RBP24.52■■□□□ 1.52
DDB2-216ENST00000622878 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
DDB2-216ENST00000622878 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
DDB2-216ENST00000622878 SLIT1O75093 1534 aa24.51■■□□□ 1.51
DDB2-216ENST00000622878 TET3O43151 1660 aa24.5■■□□□ 1.51
DDB2-216ENST00000622878 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
DDB2-216ENST00000622878 IQGAP1P46940 1657 aa24.5■■□□□ 1.51
DDB2-216ENST00000622878 RPRD2Q5VT52 1461 aaKnown RBP24.49■■□□□ 1.51
DDB2-216ENST00000622878 ITGAEP38570 1179 aa24.47■■□□□ 1.51
DDB2-216ENST00000622878 IDI1Q13907 227 aa24.47■■□□□ 1.51
DDB2-216ENST00000622878 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
DDB2-216ENST00000622878 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.51
DDB2-216ENST00000622878 LTKP29376 864 aa24.45■■□□□ 1.5
DDB2-216ENST00000622878 IQGAP3Q86VI3 1631 aa24.44■■□□□ 1.5
DDB2-216ENST00000622878 CPS1P31327 1500 aa24.43■■□□□ 1.5
DDB2-216ENST00000622878 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
DDB2-216ENST00000622878 E9PCH4 1651 aa24.41■■□□□ 1.5
DDB2-216ENST00000622878 SLC52A1Q9NWF4 448 aa24.41■■□□□ 1.5
DDB2-216ENST00000622878 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
DDB2-216ENST00000622878 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
DDB2-216ENST00000622878 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.5
DDB2-216ENST00000622878 NUP155O75694 1391 aa24.37■■□□□ 1.49
DDB2-216ENST00000622878 STAG3Q9UJ98 1225 aa24.36■■□□□ 1.49
DDB2-216ENST00000622878 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
DDB2-216ENST00000622878 NAIPQ13075 1403 aa24.33■■□□□ 1.49
DDB2-216ENST00000622878 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
DDB2-216ENST00000622878 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
DDB2-216ENST00000622878 UBAP1LF5GYI3 381 aa24.32■■□□□ 1.48
DDB2-216ENST00000622878 LRRC7Q96NW7 1537 aa24.29■■□□□ 1.48
DDB2-216ENST00000622878 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
DDB2-216ENST00000622878 ALKQ9UM73 1620 aa24.25■■□□□ 1.47
DDB2-216ENST00000622878 HFM1A2PYH4 1435 aa24.25■■□□□ 1.47
DDB2-216ENST00000622878 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
DDB2-216ENST00000622878 RIMS2Q9UQ26 1411 aa24.22■■□□□ 1.47
DDB2-216ENST00000622878 XIRP1Q702N8 1843 aaKnown RBP24.21■■□□□ 1.47
DDB2-216ENST00000622878 TOM1O60784 492 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms