RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
PCDHGC3-207ENST00000622656 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
PCDHGC3-207ENST00000622656 KDM5DQ9BY66 1539 aa15.94■□□□□ 0.14
PCDHGC3-207ENST00000622656 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-207ENST00000622656 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
PCDHGC3-207ENST00000622656 DNMT1P26358 1616 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-207ENST00000622656 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
PCDHGC3-207ENST00000622656 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-207ENST00000622656 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
PCDHGC3-207ENST00000622656 CEP152O94986 1710 aa15.91■□□□□ 0.14
PCDHGC3-207ENST00000622656 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-207ENST00000622656 NCOA1Q15788 1441 aa15.91■□□□□ 0.14
PCDHGC3-207ENST00000622656 DAPK1P53355 1430 aa15.9■□□□□ 0.14
PCDHGC3-207ENST00000622656 PZPP20742 1482 aa15.89■□□□□ 0.13
PCDHGC3-207ENST00000622656 WASHC2CQ9Y4E1 1318 aa15.89■□□□□ 0.13
PCDHGC3-207ENST00000622656 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
PCDHGC3-207ENST00000622656 ABCC3O15438 1527 aa15.88■□□□□ 0.13
PCDHGC3-207ENST00000622656 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
PCDHGC3-207ENST00000622656 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
PCDHGC3-207ENST00000622656 RRP7BPQ9NSQ0 103 aa15.87■□□□□ 0.13
PCDHGC3-207ENST00000622656 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
PCDHGC3-207ENST00000622656 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
PCDHGC3-207ENST00000622656 PTPRTO14522 1441 aa15.86■□□□□ 0.13
PCDHGC3-207ENST00000622656 CHIC2Q9UKJ5 165 aa15.86■□□□□ 0.13
PCDHGC3-207ENST00000622656 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-207ENST00000622656 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
PCDHGC3-207ENST00000622656 TNRQ92752 1358 aa15.85■□□□□ 0.13
PCDHGC3-207ENST00000622656 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
PCDHGC3-207ENST00000622656 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-207ENST00000622656 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
PCDHGC3-207ENST00000622656 DEPDC5O75140 1603 aa15.83■□□□□ 0.12
PCDHGC3-207ENST00000622656 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
PCDHGC3-207ENST00000622656 PRDM15P57071 1507 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-207ENST00000622656 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
PCDHGC3-207ENST00000622656 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-207ENST00000622656 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
PCDHGC3-207ENST00000622656 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
PCDHGC3-207ENST00000622656 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
PCDHGC3-207ENST00000622656 NEURL4Q96JN8 1562 aa15.79■□□□□ 0.12
PCDHGC3-207ENST00000622656 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
PCDHGC3-207ENST00000622656 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
PCDHGC3-207ENST00000622656 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
PCDHGC3-207ENST00000622656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.12
PCDHGC3-207ENST00000622656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCDHGC3-207ENST00000622656 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
PCDHGC3-207ENST00000622656 UGGT1Q9NYU2 1555 aa15.76■□□□□ 0.11
PCDHGC3-207ENST00000622656 NLRP1Q9C000 1473 aa15.76■□□□□ 0.11
PCDHGC3-207ENST00000622656 VWDEQ8N2E2 1590 aa15.75■□□□□ 0.11
PCDHGC3-207ENST00000622656 PKD2Q13563 968 aa15.75■□□□□ 0.11
PCDHGC3-207ENST00000622656 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
PCDHGC3-207ENST00000622656 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
PCDHGC3-207ENST00000622656 ARHGAP31Q2M1Z3 1444 aa15.72■□□□□ 0.11
PCDHGC3-207ENST00000622656 LMTK2Q8IWU2 1503 aa15.7■□□□□ 0.1
PCDHGC3-207ENST00000622656 PIK3C2BO00750 1634 aa15.7■□□□□ 0.1
PCDHGC3-207ENST00000622656 ANKRD50Q9ULJ7 1429 aa15.69■□□□□ 0.1
PCDHGC3-207ENST00000622656 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
PCDHGC3-207ENST00000622656 SYNMO15061 1565 aa15.69■□□□□ 0.1
PCDHGC3-207ENST00000622656 SOCS7O14512 581 aa15.68■□□□□ 0.1
PCDHGC3-207ENST00000622656 EFCAB6Q5THR3 1501 aa15.68■□□□□ 0.1
PCDHGC3-207ENST00000622656 IQGAP1P46940 1657 aa15.67■□□□□ 0.1
PCDHGC3-207ENST00000622656 KANK1Q14678 1352 aa15.67■□□□□ 0.1
PCDHGC3-207ENST00000622656 ITGAEP38570 1179 aa15.67■□□□□ 0.1
PCDHGC3-207ENST00000622656 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
PCDHGC3-207ENST00000622656 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
PCDHGC3-207ENST00000622656 MED14O60244 1454 aa15.66■□□□□ 0.1
PCDHGC3-207ENST00000622656 NPHP4O75161 1426 aaPredicted RBP15.66■□□□□ 0.1
PCDHGC3-207ENST00000622656 UNC13BO14795 1591 aa15.66■□□□□ 0.1
PCDHGC3-207ENST00000622656 DISP3Q9P2K9 1392 aa15.64■□□□□ 0.09
PCDHGC3-207ENST00000622656 MYO5BQ9ULV0 1848 aa15.64■□□□□ 0.09
PCDHGC3-207ENST00000622656 IQSEC2Q5JU85 1478 aa15.64■□□□□ 0.09
PCDHGC3-207ENST00000622656 TET3O43151 1660 aa15.63■□□□□ 0.09
PCDHGC3-207ENST00000622656 NOS1P29475 1434 aa15.63■□□□□ 0.09
PCDHGC3-207ENST00000622656 LTKP29376 864 aa15.63■□□□□ 0.09
PCDHGC3-207ENST00000622656 ARHGAP23Q9P227 1491 aa15.63■□□□□ 0.09
PCDHGC3-207ENST00000622656 GCC2Q8IWJ2 1684 aa15.63■□□□□ 0.09
PCDHGC3-207ENST00000622656 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
PCDHGC3-207ENST00000622656 IDI1Q13907 227 aa15.62■□□□□ 0.09
PCDHGC3-207ENST00000622656 E9PCH4 1651 aa15.62■□□□□ 0.09
PCDHGC3-207ENST00000622656 SLIT1O75093 1534 aa15.62■□□□□ 0.09
PCDHGC3-207ENST00000622656 SCAF11Q99590 1463 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-207ENST00000622656 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
PCDHGC3-207ENST00000622656 KDM5AP29375 1690 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-207ENST00000622656 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-207ENST00000622656 TXNDC2Q86VQ3 553 aa15.57■□□□□ 0.08
PCDHGC3-207ENST00000622656 ADGRB3O60242 1522 aa15.57■□□□□ 0.08
PCDHGC3-207ENST00000622656 CPS1P31327 1500 aa15.57■□□□□ 0.08
PCDHGC3-207ENST00000622656 TMEM2Q9UHN6 1383 aa15.56■□□□□ 0.08
PCDHGC3-207ENST00000622656 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-207ENST00000622656 XIRP1Q702N8 1843 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-207ENST00000622656 ALKQ9UM73 1620 aa15.55■□□□□ 0.08
PCDHGC3-207ENST00000622656 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
PCDHGC3-207ENST00000622656 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
PCDHGC3-207ENST00000622656 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
PCDHGC3-207ENST00000622656 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
PCDHGC3-207ENST00000622656 NUP155O75694 1391 aa15.52■□□□□ 0.08
PCDHGC3-207ENST00000622656 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-207ENST00000622656 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
PCDHGC3-207ENST00000622656 EID1Q9Y6B2 187 aa15.5■□□□□ 0.07
PCDHGC3-207ENST00000622656 NAIPQ13075 1403 aa15.5■□□□□ 0.07
PCDHGC3-207ENST00000622656 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms