RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.24■■□□□ 1.957e-6■□□□□ 10.8
SEMA6C-210ENST00000621728 ZMYM4Q5VZL5 1548 aa27.23■■□□□ 1.95
SEMA6C-210ENST00000621728 A2MP01023 1474 aa27.23■■□□□ 1.95
SEMA6C-210ENST00000621728 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
SEMA6C-210ENST00000621728 FAM135AQ9P2D6 1515 aa27.19■■□□□ 1.94
SEMA6C-210ENST00000621728 MAGI2Q86UL8 1455 aa27.19■■□□□ 1.94
SEMA6C-210ENST00000621728 EIF2AK4Q9P2K8 1649 aaKnown RBP27.18■■□□□ 1.94
SEMA6C-210ENST00000621728 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
SEMA6C-210ENST00000621728 KIF3BO15066 747 aa27.18■■□□□ 1.94
SEMA6C-210ENST00000621728 DEPDC5O75140 1603 aa27.17■■□□□ 1.94
SEMA6C-210ENST00000621728 IQGAP3Q86VI3 1631 aa27.16■■□□□ 1.94
SEMA6C-210ENST00000621728 PKD2Q13563 968 aa27.16■■□□□ 1.94
SEMA6C-210ENST00000621728 MROH1Q8NDA8 1641 aa27.14■■□□□ 1.93
SEMA6C-210ENST00000621728 ANKRD30BQ9BXX2 1392 aa27.1■■□□□ 1.93
SEMA6C-210ENST00000621728 RNF17Q9BXT8 1623 aaKnown RBP27.08■■□□□ 1.93
SEMA6C-210ENST00000621728 PRDM15P57071 1507 aaPredicted RBP27.08■■□□□ 1.93
SEMA6C-210ENST00000621728 BCORL1Q5H9F3 1711 aa27.06■■□□□ 1.92
SEMA6C-210ENST00000621728 ATP10AO60312 1499 aa27.05■■□□□ 1.92
SEMA6C-210ENST00000621728 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
SEMA6C-210ENST00000621728 SIGLEC1Q9BZZ2 1709 aa27.05■■□□□ 1.92
SEMA6C-210ENST00000621728 ARHGEF40Q8TER5 1519 aa27.04■■□□□ 1.92
SEMA6C-210ENST00000621728 GGT6Q6P531 493 aa27.02■■□□□ 1.92
SEMA6C-210ENST00000621728 CEP152O94986 1710 aa27.01■■□□□ 1.91
SEMA6C-210ENST00000621728 KANK1Q14678 1352 aa27■■□□□ 1.91
SEMA6C-210ENST00000621728 E9PCH4 1651 aa27■■□□□ 1.91
SEMA6C-210ENST00000621728 TET3O43151 1660 aa26.98■■□□□ 1.91
SEMA6C-210ENST00000621728 REREQ9P2R6 1566 aa26.97■■□□□ 1.91
SEMA6C-210ENST00000621728 RPRD2Q5VT52 1461 aaKnown RBP26.94■■□□□ 1.9
SEMA6C-210ENST00000621728 PLA2R1Q13018 1463 aa26.94■■□□□ 1.9
SEMA6C-210ENST00000621728 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
SEMA6C-210ENST00000621728 ABCC3O15438 1527 aa26.91■■□□□ 1.9
SEMA6C-210ENST00000621728 AGLP35573 1532 aa26.9■■□□□ 1.9
SEMA6C-210ENST00000621728 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
SEMA6C-210ENST00000621728 LMTK2Q8IWU2 1503 aa26.9■■□□□ 1.9
SEMA6C-210ENST00000621728 WASHC2CQ9Y4E1 1318 aa26.87■■□□□ 1.89
SEMA6C-210ENST00000621728 TIMELESSQ9UNS1 1208 aa26.86■■□□□ 1.89
SEMA6C-210ENST00000621728 SPHKAPQ2M3C7 1700 aa26.86■■□□□ 1.89
SEMA6C-210ENST00000621728 CAMSAP1Q5T5Y3 1602 aa26.85■■□□□ 1.89
SEMA6C-210ENST00000621728 MLECQ14165 292 aa26.84■■□□□ 1.89
SEMA6C-210ENST00000621728 CFAP65Q6ZU64 1925 aaKnown RBP26.83■■□□□ 1.89
SEMA6C-210ENST00000621728 L3MBTL2Q969R5 705 aa26.82■■□□□ 1.88
SEMA6C-210ENST00000621728 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
SEMA6C-210ENST00000621728 ZC3H13Q5T200 1668 aaKnown RBP26.82■■□□□ 1.88
SEMA6C-210ENST00000621728 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
SEMA6C-210ENST00000621728 NPATQ14207 1427 aa26.8■■□□□ 1.88
SEMA6C-210ENST00000621728 PTPRTO14522 1441 aa26.8■■□□□ 1.88
SEMA6C-210ENST00000621728 TRPM2O94759 1503 aa26.8■■□□□ 1.88
SEMA6C-210ENST00000621728 ARID4BQ4LE39 1312 aaPredicted RBP26.77■■□□□ 1.88
SEMA6C-210ENST00000621728 CLTCL1P53675 1640 aa26.77■■□□□ 1.88
SEMA6C-210ENST00000621728 CLTCQ00610 1675 aaKnown RBP26.77■■□□□ 1.88
SEMA6C-210ENST00000621728 UGGT1Q9NYU2 1555 aa26.77■■□□□ 1.88
SEMA6C-210ENST00000621728 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
SEMA6C-210ENST00000621728 RGL3Q3MIN7 710 aa26.69■■□□□ 1.86
SEMA6C-210ENST00000621728 SYNMO15061 1565 aa26.66■■□□□ 1.86
SEMA6C-210ENST00000621728 PREX1Q8TCU6 1659 aa26.66■■□□□ 1.86
SEMA6C-210ENST00000621728 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
SEMA6C-210ENST00000621728 NBPF8Q3BBV2 869 aa26.65■■□□□ 1.86
SEMA6C-210ENST00000621728 NOS1P29475 1434 aa26.64■■□□□ 1.86
SEMA6C-210ENST00000621728 SPATA31E1Q6ZUB1 1445 aa26.64■■□□□ 1.85
SEMA6C-210ENST00000621728 FBXO31Q5XUX0 539 aaPredicted RBP26.63■■□□□ 1.85
SEMA6C-210ENST00000621728 CNTLNQ9NXG0 1405 aa26.63■■□□□ 1.85
SEMA6C-210ENST00000621728 DCAF11Q8TEB1 546 aa26.62■■□□□ 1.85
SEMA6C-210ENST00000621728 KDM2AQ9Y2K7 1162 aa26.62■■□□□ 1.85
SEMA6C-210ENST00000621728 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
SEMA6C-210ENST00000621728 KIF1BO60333 1816 aa26.61■■□□□ 1.85
SEMA6C-210ENST00000621728 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
SEMA6C-210ENST00000621728 ESF1Q9H501 851 aaKnown RBP26.58■■□□□ 1.85
SEMA6C-210ENST00000621728 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
SEMA6C-210ENST00000621728 PIK3C2BO00750 1634 aa26.58■■□□□ 1.85
SEMA6C-210ENST00000621728 ZMYM3Q14202 1370 aa26.55■■□□□ 1.84
SEMA6C-210ENST00000621728 FER1L4A9Z1Z3 1794 aa26.54■■□□□ 1.84
SEMA6C-210ENST00000621728 ZNF316A6NFI3 1004 aaPredicted RBP26.53■■□□□ 1.84
SEMA6C-210ENST00000621728 CHGAP10645 457 aaKnown RBP26.53■■□□□ 1.84
SEMA6C-210ENST00000621728 ADGRB3O60242 1522 aa26.53■■□□□ 1.84
SEMA6C-210ENST00000621728 UHRF1BP1Q6BDS2 1440 aa26.51■■□□□ 1.83
SEMA6C-210ENST00000621728 SPATA31D1Q6ZQQ2 1576 aa26.51■■□□□ 1.83
SEMA6C-210ENST00000621728 IDI1Q13907 227 aa26.5■■□□□ 1.83
SEMA6C-210ENST00000621728 NEURL4Q96JN8 1562 aa26.49■■□□□ 1.83
SEMA6C-210ENST00000621728 MYO5BQ9ULV0 1848 aa26.48■■□□□ 1.83
SEMA6C-210ENST00000621728 HIRIP3Q9BW71 556 aaPredicted RBP26.47■■□□□ 1.83
SEMA6C-210ENST00000621728 PRAG1Q86YV5 1406 aa26.47■■□□□ 1.83
SEMA6C-210ENST00000621728 CEBPAP49715 358 aaPredicted RBP26.46■■□□□ 1.83
SEMA6C-210ENST00000621728 IFT172Q9UG01 1749 aa26.46■■□□□ 1.83
SEMA6C-210ENST00000621728 C3P01024 1663 aa26.45■■□□□ 1.83
SEMA6C-210ENST00000621728 MADDQ8WXG6 1647 aa26.45■■□□□ 1.82
SEMA6C-210ENST00000621728 SLC52A1Q9NWF4 448 aa26.44■■□□□ 1.82
SEMA6C-210ENST00000621728 PLPPR3Q6T4P5 718 aa26.43■■□□□ 1.82
SEMA6C-210ENST00000621728 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
SEMA6C-210ENST00000621728 RALGAPBQ86X10 1494 aa26.42■■□□□ 1.82
SEMA6C-210ENST00000621728 TMEM131LA2VDJ0 1609 aa26.42■■□□□ 1.82
SEMA6C-210ENST00000621728 RIMS1Q86UR5 1692 aaKnown RBP26.41■■□□□ 1.82
SEMA6C-210ENST00000621728 PPLO60437 1756 aa26.4■■□□□ 1.82
SEMA6C-210ENST00000621728 ADAMTSL3P82987 1691 aa26.38■■□□□ 1.81
SEMA6C-210ENST00000621728 TNRQ92752 1358 aa26.37■■□□□ 1.81
SEMA6C-210ENST00000621728 ADGRF5Q8IZF2 1346 aa26.37■■□□□ 1.81
SEMA6C-210ENST00000621728 HSPA5P11021 654 aaKnown RBP26.35■■□□□ 1.81
SEMA6C-210ENST00000621728 NBPF1Q3BBV0 1214 aa26.35■■□□□ 1.81
SEMA6C-210ENST00000621728 MYOM2P54296 1465 aa26.35■■□□□ 1.81
SEMA6C-210ENST00000621728 NEXMIFQ5QGS0 1516 aa26.35■■□□□ 1.81
SEMA6C-210ENST00000621728 NUTM2DQ5VT03 806 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms