RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	FAM43A	Q8N2R8	423 aa		12.08	□□□□□ -0.48
PLP1-223	ENST00000621218	KDM2A	Q9Y2K7	1162 aa		12.08	□□□□□ -0.48
PLP1-223	ENST00000621218	FAM161A	Q3B820	660 aa		12.07	□□□□□ -0.48
PLP1-223	ENST00000621218	WDR62	O43379	1518 aa		12.07	□□□□□ -0.48
PLP1-223	ENST00000621218	PER1	O15534	1290 aa	Predicted RBP	12.06	□□□□□ -0.48
PLP1-223	ENST00000621218	RSPH6A	Q9H0K4	717 aa		12.06	□□□□□ -0.48
PLP1-223	ENST00000621218	URB2	Q14146	1524 aa	Known RBP	12.06	□□□□□ -0.48
PLP1-223	ENST00000621218	BLM	P54132	1417 aa	Predicted RBP	12.04	□□□□□ -0.48
PLP1-223	ENST00000621218	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.04	□□□□□ -0.48
PLP1-223	ENST00000621218	KIAA0586	Q9BVV6	1533 aa		12.03	□□□□□ -0.48
PLP1-223	ENST00000621218	CC2D1B	Q5T0F9	858 aa	Known RBP	12.03	□□□□□ -0.48
PLP1-223	ENST00000621218	RGS3	P49796	1198 aa		12.03	□□□□□ -0.48
PLP1-223	ENST00000621218	POGK	Q9P215	609 aa		12.03	□□□□□ -0.48
PLP1-223	ENST00000621218	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.02	□□□□□ -0.49
PLP1-223	ENST00000621218	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12	□□□□□ -0.49
PLP1-223	ENST00000621218	IQGAP2	Q13576	1575 aa		12	□□□□□ -0.49
PLP1-223	ENST00000621218	USP19	O94966	1318 aa		12	□□□□□ -0.49
PLP1-223	ENST00000621218	ZMYM4	Q5VZL5	1548 aa		12	□□□□□ -0.49
PLP1-223	ENST00000621218	CAMSAP2	Q08AD1	1489 aa		11.99	□□□□□ -0.49
PLP1-223	ENST00000621218	DUSP27	Q5VZP5	1158 aa		11.99	□□□□□ -0.49
PLP1-223	ENST00000621218	ARHGEF12	Q9NZN5	1544 aa		11.99	□□□□□ -0.49
PLP1-223	ENST00000621218	ADAMTS8	Q9UP79	889 aa		11.99	□□□□□ -0.49
PLP1-223	ENST00000621218	ADGB	Q8N7X0	1667 aa		11.98	□□□□□ -0.49
PLP1-223	ENST00000621218	PLEKHH1	Q9ULM0	1364 aa		11.98	□□□□□ -0.49
PLP1-223	ENST00000621218	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.98	□□□□□ -0.49
PLP1-223	ENST00000621218	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	NUP155	O75694	1391 aa		11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	NBPF1	Q3BBV0	1214 aa		11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	NUP153	P49790	1475 aa	Known RBP	11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	SEC24B	O95487	1268 aa		11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	ANKRD50	Q9ULJ7	1429 aa		11.97	□□□□□ -0.49
PLP1-223	ENST00000621218	INSR	P06213	1382 aa		11.96	□□□□□ -0.49
PLP1-223	ENST00000621218	ADGRL2	O95490	1459 aa		11.96	□□□□□ -0.49
PLP1-223	ENST00000621218	PRG4	Q92954	1404 aa	Predicted RBP	11.95	□□□□□ -0.5
PLP1-223	ENST00000621218	PANK3	Q9H999	370 aa		11.95	□□□□□ -0.5
PLP1-223	ENST00000621218	DISP3	Q9P2K9	1392 aa		11.95	□□□□□ -0.5
PLP1-223	ENST00000621218	PLEKHH2	Q8IVE3	1493 aa		11.95	□□□□□ -0.5
PLP1-223	ENST00000621218	SLK	Q9H2G2	1235 aa	Predicted RBP	11.94	□□□□□ -0.5
PLP1-223	ENST00000621218	PDS5B	Q9NTI5	1447 aa		11.94	□□□□□ -0.5
PLP1-223	ENST00000621218	CROCC2	H7BZ55	1655 aa		11.94	□□□□□ -0.5
PLP1-223	ENST00000621218	ZNF521	Q96K83	1311 aa		11.94	□□□□□ -0.5
PLP1-223	ENST00000621218	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.94	□□□□□ -0.5
PLP1-223	ENST00000621218	IGHD	P01880	384 aa		11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	TESK2	Q96S53	571 aa		11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	ANKRD30A	Q9BXX3	1397 aa		11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	CEP170	Q5SW79	1584 aa		11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	VIRMA	Q69YN4	1812 aa	Known RBP	11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	TRPM1	Q7Z4N2	1603 aa		11.93	□□□□□ -0.5
PLP1-223	ENST00000621218	KDM5D	Q9BY66	1539 aa		11.92	□□□□□ -0.5
PLP1-223	ENST00000621218	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.92	□□□□□ -0.5
PLP1-223	ENST00000621218	ARX	Q96QS3	562 aa		11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	ANTXR1	Q9H6X2	564 aa		11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	PRAG1	Q86YV5	1406 aa		11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	TARBP1	Q13395	1621 aa	Known RBP	11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	GOLGA2	Q08379	1002 aa		11.91	□□□□□ -0.5
PLP1-223	ENST00000621218	BCAR3	O75815	825 aa		11.9	□□□□□ -0.5
PLP1-223	ENST00000621218	PKNOX2	Q96KN3	472 aa		11.9	□□□□□ -0.5
PLP1-223	ENST00000621218	XRCC6	P12956	609 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	RGL3	Q3MIN7	710 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	DISP1	Q96F81	1524 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	NLRP1	Q9C000	1473 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	SLFN5	Q08AF3	891 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	PBRM1	Q86U86	1689 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	RAPGEF6	Q8TEU7	1601 aa		11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	TRO	Q12816	1431 aa	Predicted RBP	11.89	□□□□□ -0.51
PLP1-223	ENST00000621218	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.88	□□□□□ -0.51
PLP1-223	ENST00000621218	PANK2	Q9BZ23	570 aa		11.88	□□□□□ -0.51
PLP1-223	ENST00000621218	ITSN2	Q9NZM3	1697 aa		11.88	□□□□□ -0.51
PLP1-223	ENST00000621218	TRMT2A	Q8IZ69	625 aa	Known RBP	11.87	□□□□□ -0.51
PLP1-223	ENST00000621218	KIAA0556	O60303	1618 aa		11.87	□□□□□ -0.51
PLP1-223	ENST00000621218	EIF3A	Q14152	1382 aa	Known RBP	11.87	□□□□□ -0.51
PLP1-223	ENST00000621218	PPP2R1A	P30153	589 aa		11.87	□□□□□ -0.51
PLP1-223	ENST00000621218	L1TD1	Q5T7N2	865 aa	Known RBP	11.87	□□□□□ -0.51
PLP1-223	ENST00000621218	ADAMTS12	P58397	1594 aa		11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	GPRASP1	Q5JY77	1395 aa		11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	PTPRG	P23470	1445 aa		11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	ERBIN	Q96RT1	1412 aa		11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	WDR43	Q15061	677 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	CCDC146	Q8IYE0	955 aa		11.86	□□□□□ -0.51
PLP1-223	ENST00000621218	C9orf84	Q5VXU9	1444 aa		11.85	□□□□□ -0.51
PLP1-223	ENST00000621218	MAGI2	Q86UL8	1455 aa		11.85	□□□□□ -0.51
PLP1-223	ENST00000621218	FSD2	A1L4K1	749 aa		11.85	□□□□□ -0.51
PLP1-223	ENST00000621218	BECN1	Q14457	450 aa		11.85	□□□□□ -0.51
PLP1-223	ENST00000621218	CDC42BPA	Q5VT25	1732 aa		11.85	□□□□□ -0.51
PLP1-223	ENST00000621218	PRDM15	P57071	1507 aa	Predicted RBP	11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	ZMYND15	Q9H091	742 aa		11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	DMRT2	Q9Y5R5	561 aa		11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	EIF4G3	O43432	1585 aa	Known RBP	11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	VSIG10	Q8N0Z9	540 aa		11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	TBC1D2	Q9BYX2	928 aa		11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	GZF1	Q9H116	711 aa	Predicted RBP	11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	CLCN1	P35523	988 aa		11.84	□□□□□ -0.51
PLP1-223	ENST00000621218	MRC2	Q9UBG0	1479 aa		11.83	□□□□□ -0.52
PLP1-223	ENST00000621218	A2M	P01023	1474 aa		11.83	□□□□□ -0.52
PLP1-223	ENST00000621218	SPRYD3	Q8NCJ5	442 aa		11.83	□□□□□ -0.52
PLP1-223	ENST00000621218	GOLGA6L3	A6NEY3	463 aa		11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	NKTR	P30414	1462 aa	Known RBP	11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	TMF1	P82094	1093 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms