RNA–Protein interactions for RNA: ENST00000621008.1

PCDHGC3-206, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-206ENST00000621008 RNF17Q9BXT8 1623 aaKnown RBP19.72■□□□□ 0.75
PCDHGC3-206ENST00000621008 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
PCDHGC3-206ENST00000621008 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
PCDHGC3-206ENST00000621008 NPATQ14207 1427 aa19.68■□□□□ 0.74
PCDHGC3-206ENST00000621008 KDM5DQ9BY66 1539 aa19.68■□□□□ 0.74
PCDHGC3-206ENST00000621008 ZC3H13Q5T200 1668 aaKnown RBP19.68■□□□□ 0.74
PCDHGC3-206ENST00000621008 ZMYM3Q14202 1370 aa19.68■□□□□ 0.74
PCDHGC3-206ENST00000621008 C3P01024 1663 aa19.67■□□□□ 0.74
PCDHGC3-206ENST00000621008 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
PCDHGC3-206ENST00000621008 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
PCDHGC3-206ENST00000621008 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
PCDHGC3-206ENST00000621008 DEPDC5O75140 1603 aa19.64■□□□□ 0.73
PCDHGC3-206ENST00000621008 PRDM15P57071 1507 aaPredicted RBP19.63■□□□□ 0.73
PCDHGC3-206ENST00000621008 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
PCDHGC3-206ENST00000621008 KANK1Q14678 1352 aa19.63■□□□□ 0.73
PCDHGC3-206ENST00000621008 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
PCDHGC3-206ENST00000621008 PTPRKQ15262 1439 aa19.62■□□□□ 0.73
PCDHGC3-206ENST00000621008 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
PCDHGC3-206ENST00000621008 CEBPAP49715 358 aaPredicted RBP19.59■□□□□ 0.73
PCDHGC3-206ENST00000621008 PZPP20742 1482 aa19.59■□□□□ 0.73
PCDHGC3-206ENST00000621008 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
PCDHGC3-206ENST00000621008 ABCC3O15438 1527 aa19.58■□□□□ 0.73
PCDHGC3-206ENST00000621008 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
PCDHGC3-206ENST00000621008 ARHGAP31Q2M1Z3 1444 aa19.57■□□□□ 0.72
PCDHGC3-206ENST00000621008 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
PCDHGC3-206ENST00000621008 VWDEQ8N2E2 1590 aa19.56■□□□□ 0.72
PCDHGC3-206ENST00000621008 ACIN1Q9UKV3 1341 aaKnown RBP19.55■□□□□ 0.72
PCDHGC3-206ENST00000621008 ITGAEP38570 1179 aa19.53■□□□□ 0.72
PCDHGC3-206ENST00000621008 CAMSAP1Q5T5Y3 1602 aa19.52■□□□□ 0.72
PCDHGC3-206ENST00000621008 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
PCDHGC3-206ENST00000621008 UNC13BO14795 1591 aa19.51■□□□□ 0.71
PCDHGC3-206ENST00000621008 CEP152O94986 1710 aa19.51■□□□□ 0.71
PCDHGC3-206ENST00000621008 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
PCDHGC3-206ENST00000621008 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
PCDHGC3-206ENST00000621008 SPATA31D1Q6ZQQ2 1576 aa19.49■□□□□ 0.71
PCDHGC3-206ENST00000621008 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
PCDHGC3-206ENST00000621008 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
PCDHGC3-206ENST00000621008 TNRQ92752 1358 aa19.48■□□□□ 0.71
PCDHGC3-206ENST00000621008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
PCDHGC3-206ENST00000621008 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
PCDHGC3-206ENST00000621008 MYO3AQ8NEV4 1616 aa19.47■□□□□ 0.71
PCDHGC3-206ENST00000621008 NAIPQ13075 1403 aa19.46■□□□□ 0.71
PCDHGC3-206ENST00000621008 A2ML1A8K2U0 1454 aa19.45■□□□□ 0.7
PCDHGC3-206ENST00000621008 TET3O43151 1660 aa19.45■□□□□ 0.7
PCDHGC3-206ENST00000621008 ERVK-7P63135 1459 aa19.44■□□□□ 0.7
PCDHGC3-206ENST00000621008 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
PCDHGC3-206ENST00000621008 EFCAB6Q5THR3 1501 aa19.44■□□□□ 0.7
PCDHGC3-206ENST00000621008 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
PCDHGC3-206ENST00000621008 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
PCDHGC3-206ENST00000621008 FBXO31Q5XUX0 539 aaPredicted RBP19.42■□□□□ 0.7
PCDHGC3-206ENST00000621008 NUP155O75694 1391 aa19.41■□□□□ 0.7
PCDHGC3-206ENST00000621008 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
PCDHGC3-206ENST00000621008 THEMISQ8N1K5 641 aaPredicted RBP19.39■□□□□ 0.69
PCDHGC3-206ENST00000621008 PKD2Q13563 968 aa19.38■□□□□ 0.69
PCDHGC3-206ENST00000621008 SLC52A1Q9NWF4 448 aa19.38■□□□□ 0.69
PCDHGC3-206ENST00000621008 KDM5AP29375 1690 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-206ENST00000621008 NOS1P29475 1434 aa19.37■□□□□ 0.69
PCDHGC3-206ENST00000621008 HSPA2P54652 639 aa19.37■□□□□ 0.69
PCDHGC3-206ENST00000621008 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-206ENST00000621008 UGGT1Q9NYU2 1555 aa19.36■□□□□ 0.69
PCDHGC3-206ENST00000621008 PTPRTO14522 1441 aa19.34■□□□□ 0.69
PCDHGC3-206ENST00000621008 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
PCDHGC3-206ENST00000621008 HRCP23327 699 aa19.32■□□□□ 0.68
PCDHGC3-206ENST00000621008 E9PCH4 1651 aa19.31■□□□□ 0.68
PCDHGC3-206ENST00000621008 SETD5Q9C0A6 1442 aa19.31■□□□□ 0.68
PCDHGC3-206ENST00000621008 UBR1Q8IWV7 1749 aa19.28■□□□□ 0.68
PCDHGC3-206ENST00000621008 SYNMO15061 1565 aa19.28■□□□□ 0.68
PCDHGC3-206ENST00000621008 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
PCDHGC3-206ENST00000621008 IDI1Q13907 227 aa19.27■□□□□ 0.68
PCDHGC3-206ENST00000621008 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
PCDHGC3-206ENST00000621008 SLIT1O75093 1534 aa19.25■□□□□ 0.67
PCDHGC3-206ENST00000621008 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
PCDHGC3-206ENST00000621008 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
PCDHGC3-206ENST00000621008 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
PCDHGC3-206ENST00000621008 MED14O60244 1454 aa19.24■□□□□ 0.67
PCDHGC3-206ENST00000621008 HDGFP51858 240 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-206ENST00000621008 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
PCDHGC3-206ENST00000621008 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-206ENST00000621008 SPHKAPQ2M3C7 1700 aa19.22■□□□□ 0.67
PCDHGC3-206ENST00000621008 ADGRB3O60242 1522 aa19.22■□□□□ 0.67
PCDHGC3-206ENST00000621008 EID1Q9Y6B2 187 aa19.21■□□□□ 0.67
PCDHGC3-206ENST00000621008 TMEM2Q9UHN6 1383 aa19.2■□□□□ 0.66
PCDHGC3-206ENST00000621008 TRPM2O94759 1503 aa19.19■□□□□ 0.66
PCDHGC3-206ENST00000621008 NCKAP5LQ9HCH0 1330 aa19.19■□□□□ 0.66
PCDHGC3-206ENST00000621008 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
PCDHGC3-206ENST00000621008 SCAF11Q99590 1463 aaKnown RBP19.17■□□□□ 0.66
PCDHGC3-206ENST00000621008 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
PCDHGC3-206ENST00000621008 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
PCDHGC3-206ENST00000621008 NEURL4Q96JN8 1562 aa19.16■□□□□ 0.66
PCDHGC3-206ENST00000621008 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCDHGC3-206ENST00000621008 NPHP4O75161 1426 aaPredicted RBP19.16■□□□□ 0.66
PCDHGC3-206ENST00000621008 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
PCDHGC3-206ENST00000621008 IQGAP1P46940 1657 aa19.13■□□□□ 0.65
PCDHGC3-206ENST00000621008 KIF1BO60333 1816 aa19.11■□□□□ 0.65
PCDHGC3-206ENST00000621008 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
PCDHGC3-206ENST00000621008 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
PCDHGC3-206ENST00000621008 LTKP29376 864 aa19.09■□□□□ 0.65
PCDHGC3-206ENST00000621008 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
PCDHGC3-206ENST00000621008 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
PCDHGC3-206ENST00000621008 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms