RNA–Protein interactions for RNA: ENST00000620895.1

PMPCA-211, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 3

Gene PMPCA, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-211ENST00000620895 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
PMPCA-211ENST00000620895 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
PMPCA-211ENST00000620895 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
PMPCA-211ENST00000620895 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
PMPCA-211ENST00000620895 PLA2R1Q13018 1463 aa28.02■■■□□ 2.08
PMPCA-211ENST00000620895 FAM135AQ9P2D6 1515 aa28.01■■■□□ 2.07
PMPCA-211ENST00000620895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28■■■□□ 2.07
PMPCA-211ENST00000620895 CEP170BQ9Y4F5 1589 aaPredicted RBP28■■■□□ 2.07
PMPCA-211ENST00000620895 LTBP4Q8N2S1 1624 aa27.99■■■□□ 2.07
PMPCA-211ENST00000620895 PKD2Q13563 968 aa27.98■■■□□ 2.07
PMPCA-211ENST00000620895 ABCC5O15440 1437 aa27.97■■■□□ 2.07
PMPCA-211ENST00000620895 DNMT1P26358 1616 aaKnown RBP27.96■■■□□ 2.07
PMPCA-211ENST00000620895 DAPK1P53355 1430 aa27.94■■■□□ 2.06
PMPCA-211ENST00000620895 KDM5DQ9BY66 1539 aa27.92■■■□□ 2.06
PMPCA-211ENST00000620895 A2ML1A8K2U0 1454 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 KIF3BO15066 747 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 CROCC2H7BZ55 1655 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 NCKAP5LQ9HCH0 1330 aa27.9■■■□□ 2.06
PMPCA-211ENST00000620895 PZPP20742 1482 aa27.87■■■□□ 2.05
PMPCA-211ENST00000620895 MAST1Q9Y2H9 1570 aa27.86■■■□□ 2.05
PMPCA-211ENST00000620895 ITGAEP38570 1179 aa27.86■■■□□ 2.05
PMPCA-211ENST00000620895 SHANK2Q9UPX8 1470 aa27.86■■■□□ 2.05
PMPCA-211ENST00000620895 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
PMPCA-211ENST00000620895 TNRQ92752 1358 aa27.84■■■□□ 2.05
PMPCA-211ENST00000620895 CHIC2Q9UKJ5 165 aa27.83■■■□□ 2.05
PMPCA-211ENST00000620895 ZNF335Q9H4Z2 1342 aaPredicted RBP27.8■■■□□ 2.04
PMPCA-211ENST00000620895 POLR1AO95602 1720 aaPredicted RBP27.77■■■□□ 2.04
PMPCA-211ENST00000620895 ADGRL2O95490 1459 aa27.76■■■□□ 2.04
PMPCA-211ENST00000620895 NLRP1Q9C000 1473 aa27.76■■■□□ 2.04
PMPCA-211ENST00000620895 ZC3H13Q5T200 1668 aaKnown RBP27.75■■■□□ 2.03
PMPCA-211ENST00000620895 RNF17Q9BXT8 1623 aaKnown RBP27.75■■■□□ 2.03
PMPCA-211ENST00000620895 FBXO31Q5XUX0 539 aaPredicted RBP27.75■■■□□ 2.03
PMPCA-211ENST00000620895 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
PMPCA-211ENST00000620895 DISP3Q9P2K9 1392 aa27.74■■■□□ 2.03
PMPCA-211ENST00000620895 ANKRD30AQ9BXX3 1397 aa27.73■■■□□ 2.03
PMPCA-211ENST00000620895 RRP7BPQ9NSQ0 103 aa27.72■■■□□ 2.03
PMPCA-211ENST00000620895 ROCK1Q13464 1354 aa27.72■■■□□ 2.03
PMPCA-211ENST00000620895 THEMISQ8N1K5 641 aaPredicted RBP27.71■■■□□ 2.03
PMPCA-211ENST00000620895 UBAP1LF5GYI3 381 aa27.69■■■□□ 2.02
PMPCA-211ENST00000620895 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
PMPCA-211ENST00000620895 KIF15Q9NS87 1388 aa27.69■■■□□ 2.02
PMPCA-211ENST00000620895 UGGT1Q9NYU2 1555 aa27.69■■■□□ 2.02
PMPCA-211ENST00000620895 ANKLE2Q86XL3 938 aa27.68■■■□□ 2.02
PMPCA-211ENST00000620895 NEURL4Q96JN8 1562 aa27.68■■■□□ 2.02
PMPCA-211ENST00000620895 CPS1P31327 1500 aa27.67■■■□□ 2.02
PMPCA-211ENST00000620895 ABCC3O15438 1527 aa27.67■■■□□ 2.02
PMPCA-211ENST00000620895 SPATA31D1Q6ZQQ2 1576 aa27.66■■■□□ 2.02
PMPCA-211ENST00000620895 DEPDC5O75140 1603 aa27.65■■■□□ 2.02
PMPCA-211ENST00000620895 DUOX2Q9NRD8 1548 aa27.64■■■□□ 2.02
PMPCA-211ENST00000620895 MED14O60244 1454 aa27.62■■■□□ 2.01
PMPCA-211ENST00000620895 MROH1Q8NDA8 1641 aa27.59■■■□□ 2.01
PMPCA-211ENST00000620895 ERVK-7P63135 1459 aa27.58■■■□□ 2.01
PMPCA-211ENST00000620895 NPHP4O75161 1426 aaPredicted RBP27.58■■■□□ 2
PMPCA-211ENST00000620895 NAIPQ13075 1403 aa27.58■■■□□ 2
PMPCA-211ENST00000620895 HFM1A2PYH4 1435 aa27.57■■■□□ 2
PMPCA-211ENST00000620895 ERBINQ96RT1 1412 aa27.56■■■□□ 2
PMPCA-211ENST00000620895 ANKRD50Q9ULJ7 1429 aa27.56■■■□□ 2
PMPCA-211ENST00000620895 TOM1O60784 492 aa27.54■■■□□ 2
PMPCA-211ENST00000620895 CEP152O94986 1710 aa27.54■■■□□ 2
PMPCA-211ENST00000620895 IQGAP1P46940 1657 aa27.53■■■□□ 2
PMPCA-211ENST00000620895 GCC2Q8IWJ2 1684 aa27.53■■■□□ 2
PMPCA-211ENST00000620895 PRDM15P57071 1507 aaPredicted RBP27.53■■■□□ 2
PMPCA-211ENST00000620895 VWDEQ8N2E2 1590 aa27.52■■■□□ 2
PMPCA-211ENST00000620895 ARHGAP31Q2M1Z3 1444 aa27.51■■□□□ 1.99
PMPCA-211ENST00000620895 ILDR2Q71H61 639 aa27.51■■□□□ 1.99
PMPCA-211ENST00000620895 SOCS7O14512 581 aa27.48■■□□□ 1.99
PMPCA-211ENST00000620895 SETD5Q9C0A6 1442 aa27.47■■□□□ 1.99
PMPCA-211ENST00000620895 UBR1Q8IWV7 1749 aa27.47■■□□□ 1.99
PMPCA-211ENST00000620895 KANK1Q14678 1352 aa27.46■■□□□ 1.99
PMPCA-211ENST00000620895 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
PMPCA-211ENST00000620895 SCAF11Q99590 1463 aaKnown RBP27.43■■□□□ 1.98
PMPCA-211ENST00000620895 CFAP65Q6ZU64 1925 aaKnown RBP27.42■■□□□ 1.98
PMPCA-211ENST00000620895 SYNMO15061 1565 aa27.42■■□□□ 1.98
PMPCA-211ENST00000620895 PIP4K2BP78356 416 aa27.41■■□□□ 1.98
PMPCA-211ENST00000620895 SLIT1O75093 1534 aa27.41■■□□□ 1.98
PMPCA-211ENST00000620895 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
PMPCA-211ENST00000620895 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
PMPCA-211ENST00000620895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.38■■□□□ 1.971e-6■■■□□ 16.5
PMPCA-211ENST00000620895 RAB3GAP2Q9H2M9 1393 aa27.37■■□□□ 1.97
PMPCA-211ENST00000620895 LMTK2Q8IWU2 1503 aa27.36■■□□□ 1.97
PMPCA-211ENST00000620895 UNC13BO14795 1591 aa27.36■■□□□ 1.97
PMPCA-211ENST00000620895 HSPA1LP34931 641 aa27.36■■□□□ 1.97
PMPCA-211ENST00000620895 EID1Q9Y6B2 187 aa27.36■■□□□ 1.97
PMPCA-211ENST00000620895 KDM5AP29375 1690 aaKnown RBP27.35■■□□□ 1.97
PMPCA-211ENST00000620895 LRRC7Q96NW7 1537 aa27.34■■□□□ 1.97
PMPCA-211ENST00000620895 TXNDC2Q86VQ3 553 aa27.33■■□□□ 1.97
PMPCA-211ENST00000620895 STRCP1A6NGW2 1772 aa27.32■■□□□ 1.96
PMPCA-211ENST00000620895 PIK3C2BO00750 1634 aa27.31■■□□□ 1.96
PMPCA-211ENST00000620895 HRCP23327 699 aa27.31■■□□□ 1.96
PMPCA-211ENST00000620895 STAG3Q9UJ98 1225 aa27.3■■□□□ 1.96
PMPCA-211ENST00000620895 NUP155O75694 1391 aa27.3■■□□□ 1.96
PMPCA-211ENST00000620895 LTKP29376 864 aa27.29■■□□□ 1.96
PMPCA-211ENST00000620895 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
PMPCA-211ENST00000620895 TMEM2Q9UHN6 1383 aa27.29■■□□□ 1.96
PMPCA-211ENST00000620895 ALKQ9UM73 1620 aa27.28■■□□□ 1.96
PMPCA-211ENST00000620895 EFCAB6Q5THR3 1501 aa27.27■■□□□ 1.96
PMPCA-211ENST00000620895 MED1Q15648 1581 aaPredicted RBP27.26■■□□□ 1.96
PMPCA-211ENST00000620895 IQGAP3Q86VI3 1631 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms