RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 PKD2Q13563 968 aa23.98■■□□□ 1.43
PCGF3-213ENST00000620529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.43
PCGF3-213ENST00000620529 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
PCGF3-213ENST00000620529 TONSLQ96HA7 1378 aa23.97■■□□□ 1.43
PCGF3-213ENST00000620529 ANKRD30BQ9BXX2 1392 aa23.97■■□□□ 1.43
PCGF3-213ENST00000620529 ABCA6Q8N139 1617 aa23.97■■□□□ 1.43
PCGF3-213ENST00000620529 A2MP01023 1474 aa23.96■■□□□ 1.43
PCGF3-213ENST00000620529 FRMPD1Q5SYB0 1578 aa23.96■■□□□ 1.43
PCGF3-213ENST00000620529 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
PCGF3-213ENST00000620529 ZMYM4Q5VZL5 1548 aa23.93■■□□□ 1.42
PCGF3-213ENST00000620529 KIF3BO15066 747 aa23.92■■□□□ 1.42
PCGF3-213ENST00000620529 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
PCGF3-213ENST00000620529 KANK1Q14678 1352 aa23.9■■□□□ 1.42
PCGF3-213ENST00000620529 RPRD2Q5VT52 1461 aaKnown RBP23.88■■□□□ 1.41
PCGF3-213ENST00000620529 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
PCGF3-213ENST00000620529 BCORL1Q5H9F3 1711 aa23.87■■□□□ 1.41
PCGF3-213ENST00000620529 RNF17Q9BXT8 1623 aaKnown RBP23.86■■□□□ 1.41
PCGF3-213ENST00000620529 MROH1Q8NDA8 1641 aa23.84■■□□□ 1.41
PCGF3-213ENST00000620529 YEATS2Q9ULM3 1422 aa23.84■■□□□ 1.41
PCGF3-213ENST00000620529 TET3O43151 1660 aa23.84■■□□□ 1.41
PCGF3-213ENST00000620529 VWDEQ8N2E2 1590 aa23.84■■□□□ 1.41
PCGF3-213ENST00000620529 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
PCGF3-213ENST00000620529 PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
PCGF3-213ENST00000620529 E9PCH4 1651 aa23.79■■□□□ 1.4
PCGF3-213ENST00000620529 CEP152O94986 1710 aa23.77■■□□□ 1.4
PCGF3-213ENST00000620529 ATP10AO60312 1499 aa23.77■■□□□ 1.4
PCGF3-213ENST00000620529 COL17A1Q9UMD9 1497 aaPredicted RBP23.76■■□□□ 1.39
PCGF3-213ENST00000620529 CCDC144AA2RUR9 1427 aa23.75■■□□□ 1.39
PCGF3-213ENST00000620529 GGT6Q6P531 493 aa23.75■■□□□ 1.39
PCGF3-213ENST00000620529 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
PCGF3-213ENST00000620529 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
PCGF3-213ENST00000620529 SPHKAPQ2M3C7 1700 aa23.73■■□□□ 1.39
PCGF3-213ENST00000620529 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
PCGF3-213ENST00000620529 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
PCGF3-213ENST00000620529 ARHGEF40Q8TER5 1519 aa23.72■■□□□ 1.39
PCGF3-213ENST00000620529 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
PCGF3-213ENST00000620529 PLA2R1Q13018 1463 aa23.69■■□□□ 1.38
PCGF3-213ENST00000620529 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
PCGF3-213ENST00000620529 TRPM2O94759 1503 aa23.67■■□□□ 1.38
PCGF3-213ENST00000620529 AGLP35573 1532 aa23.67■■□□□ 1.38
PCGF3-213ENST00000620529 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
PCGF3-213ENST00000620529 ABCC3O15438 1527 aa23.66■■□□□ 1.38
PCGF3-213ENST00000620529 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
PCGF3-213ENST00000620529 PTPRTO14522 1441 aa23.64■■□□□ 1.38
PCGF3-213ENST00000620529 CFAP65Q6ZU64 1925 aaKnown RBP23.6■■□□□ 1.37
PCGF3-213ENST00000620529 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
PCGF3-213ENST00000620529 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.37
PCGF3-213ENST00000620529 NPATQ14207 1427 aa23.58■■□□□ 1.36
PCGF3-213ENST00000620529 KIF1BO60333 1816 aa23.55■■□□□ 1.36
PCGF3-213ENST00000620529 PPP6R1Q9UPN7 881 aa23.55■■□□□ 1.36
PCGF3-213ENST00000620529 DCAF11Q8TEB1 546 aa23.53■■□□□ 1.36
PCGF3-213ENST00000620529 ARHGAP31Q2M1Z3 1444 aa23.53■■□□□ 1.36
PCGF3-213ENST00000620529 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
PCGF3-213ENST00000620529 CNTLNQ9NXG0 1405 aa23.52■■□□□ 1.36
PCGF3-213ENST00000620529 NBPF8Q3BBV2 869 aa23.52■■□□□ 1.36
PCGF3-213ENST00000620529 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
PCGF3-213ENST00000620529 UHRF1BP1Q6BDS2 1440 aa23.51■■□□□ 1.35
PCGF3-213ENST00000620529 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
PCGF3-213ENST00000620529 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
PCGF3-213ENST00000620529 SPATA31E1Q6ZUB1 1445 aa23.5■■□□□ 1.35
PCGF3-213ENST00000620529 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
PCGF3-213ENST00000620529 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
PCGF3-213ENST00000620529 UGGT1Q9NYU2 1555 aa23.48■■□□□ 1.35
PCGF3-213ENST00000620529 MLECQ14165 292 aa23.48■■□□□ 1.35
PCGF3-213ENST00000620529 PREX1Q8TCU6 1659 aa23.46■■□□□ 1.35
PCGF3-213ENST00000620529 NOS1P29475 1434 aa23.46■■□□□ 1.35
PCGF3-213ENST00000620529 DIEXFQ68CQ4 756 aaKnown RBP23.45■■□□□ 1.35
PCGF3-213ENST00000620529 ESF1Q9H501 851 aaKnown RBP23.45■■□□□ 1.34
PCGF3-213ENST00000620529 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
PCGF3-213ENST00000620529 SYNMO15061 1565 aa23.42■■□□□ 1.34
PCGF3-213ENST00000620529 EIF4G2P78344 907 aaKnown RBP eCLIP23.42■■□□□ 1.34
PCGF3-213ENST00000620529 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
PCGF3-213ENST00000620529 MROH2AA6NES4 1674 aa23.42■■□□□ 1.34
PCGF3-213ENST00000620529 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
PCGF3-213ENST00000620529 STAC3Q96MF2 364 aa23.41■■□□□ 1.34
PCGF3-213ENST00000620529 ADGRB3O60242 1522 aa23.39■■□□□ 1.34
PCGF3-213ENST00000620529 TRPM1Q7Z4N2 1603 aa23.39■■□□□ 1.33
PCGF3-213ENST00000620529 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
PCGF3-213ENST00000620529 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
PCGF3-213ENST00000620529 ERVK-7P63135 1459 aa23.37■■□□□ 1.33
PCGF3-213ENST00000620529 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
PCGF3-213ENST00000620529 IFT172Q9UG01 1749 aa23.36■■□□□ 1.33
PCGF3-213ENST00000620529 SLC52A1Q9NWF4 448 aa23.35■■□□□ 1.33
PCGF3-213ENST00000620529 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
PCGF3-213ENST00000620529 ROCK2O75116 1388 aaKnown RBP23.34■■□□□ 1.33
PCGF3-213ENST00000620529 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
PCGF3-213ENST00000620529 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
PCGF3-213ENST00000620529 MYOM2P54296 1465 aa23.31■■□□□ 1.32
PCGF3-213ENST00000620529 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
PCGF3-213ENST00000620529 PPLO60437 1756 aa23.31■■□□□ 1.32
PCGF3-213ENST00000620529 ZMYM3Q14202 1370 aa23.31■■□□□ 1.32
PCGF3-213ENST00000620529 USP47Q96K76 1375 aa23.3■■□□□ 1.32
PCGF3-213ENST00000620529 IDI1Q13907 227 aa23.29■■□□□ 1.32
PCGF3-213ENST00000620529 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
PCGF3-213ENST00000620529 LAMC1P11047 1609 aa23.29■■□□□ 1.32
PCGF3-213ENST00000620529 MYO5BQ9ULV0 1848 aa23.28■■□□□ 1.32
PCGF3-213ENST00000620529 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
PCGF3-213ENST00000620529 KIAA1210Q9ULL0 1709 aa23.26■■□□□ 1.31
PCGF3-213ENST00000620529 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
PCGF3-213ENST00000620529 GPRASP1Q5JY77 1395 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms