RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.86
SSX4B-202ENST00000619890 ZMYM3Q14202 1370 aa9.7□□□□□ -0.86
SSX4B-202ENST00000619890 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
SSX4B-202ENST00000619890 EHBP1L1Q8N3D4 1523 aa9.7□□□□□ -0.86
SSX4B-202ENST00000619890 ALKQ9UM73 1620 aa9.7□□□□□ -0.86
SSX4B-202ENST00000619890 CPS1P31327 1500 aa9.69□□□□□ -0.86
SSX4B-202ENST00000619890 AGLP35573 1532 aa9.69□□□□□ -0.86
SSX4B-202ENST00000619890 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
SSX4B-202ENST00000619890 SHANK2Q9UPX8 1470 aa9.69□□□□□ -0.86
SSX4B-202ENST00000619890 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SSX4B-202ENST00000619890 CDC42BPAQ5VT25 1732 aa9.68□□□□□ -0.86
SSX4B-202ENST00000619890 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
SSX4B-202ENST00000619890 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
SSX4B-202ENST00000619890 CDC42BPBQ9Y5S2 1711 aa9.67□□□□□ -0.86
SSX4B-202ENST00000619890 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
SSX4B-202ENST00000619890 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
SSX4B-202ENST00000619890 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
SSX4B-202ENST00000619890 TIAM1Q13009 1591 aa9.66□□□□□ -0.86
SSX4B-202ENST00000619890 DIP2CQ9Y2E4 1556 aa9.66□□□□□ -0.86
SSX4B-202ENST00000619890 ABCC1P33527 1531 aa9.65□□□□□ -0.86
SSX4B-202ENST00000619890 KDM5CP41229 1560 aa9.64□□□□□ -0.87
SSX4B-202ENST00000619890 SUPT6HQ7KZ85 1726 aaKnown RBP9.64□□□□□ -0.87
SSX4B-202ENST00000619890 MLH3Q9UHC1 1453 aa9.64□□□□□ -0.87
SSX4B-202ENST00000619890 MAP3K1Q13233 1512 aa9.63□□□□□ -0.87
SSX4B-202ENST00000619890 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
SSX4B-202ENST00000619890 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
SSX4B-202ENST00000619890 CEP170BQ9Y4F5 1589 aaPredicted RBP9.62□□□□□ -0.87
SSX4B-202ENST00000619890 ABCA6Q8N139 1617 aa9.6□□□□□ -0.87
SSX4B-202ENST00000619890 SAMD9LQ8IVG5 1584 aa9.6□□□□□ -0.87
SSX4B-202ENST00000619890 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
SSX4B-202ENST00000619890 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
SSX4B-202ENST00000619890 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
SSX4B-202ENST00000619890 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
SSX4B-202ENST00000619890 VWDEQ8N2E2 1590 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 MROH2AA6NES4 1674 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 SYCP2Q9BX26 1530 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 A2ML1A8K2U0 1454 aa9.58□□□□□ -0.88
SSX4B-202ENST00000619890 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
SSX4B-202ENST00000619890 SETD1AO15047 1707 aaKnown RBP9.57□□□□□ -0.88
SSX4B-202ENST00000619890 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
SSX4B-202ENST00000619890 LRRC9Q6ZRR7 1453 aa9.57□□□□□ -0.88
SSX4B-202ENST00000619890 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
SSX4B-202ENST00000619890 INO80Q9ULG1 1556 aaPredicted RBP9.56□□□□□ -0.88
SSX4B-202ENST00000619890 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
SSX4B-202ENST00000619890 DNMT1P26358 1616 aaKnown RBP9.56□□□□□ -0.88
SSX4B-202ENST00000619890 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
SSX4B-202ENST00000619890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSX4B-202ENST00000619890 GGT6Q6P531 493 aa9.55□□□□□ -0.88
SSX4B-202ENST00000619890 SPDYE2BA6NHP3 402 aa9.54□□□□□ -0.88
SSX4B-202ENST00000619890 SPDYE6P0CI01 402 aa9.54□□□□□ -0.88
SSX4B-202ENST00000619890 SPDYE2Q495Y8 402 aa9.54□□□□□ -0.88
SSX4B-202ENST00000619890 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
SSX4B-202ENST00000619890 KIDINS220Q9ULH0 1771 aa9.54□□□□□ -0.88
SSX4B-202ENST00000619890 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
SSX4B-202ENST00000619890 ATP7AQ04656 1500 aa9.53□□□□□ -0.88
SSX4B-202ENST00000619890 FBXO31Q5XUX0 539 aaPredicted RBP9.53□□□□□ -0.88
SSX4B-202ENST00000619890 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
SSX4B-202ENST00000619890 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
SSX4B-202ENST00000619890 MED14O60244 1454 aa9.53□□□□□ -0.88
SSX4B-202ENST00000619890 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
SSX4B-202ENST00000619890 ARHGEF5Q12774 1597 aa9.52□□□□□ -0.89
SSX4B-202ENST00000619890 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
SSX4B-202ENST00000619890 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
SSX4B-202ENST00000619890 ADGBQ8N7X0 1667 aa9.51□□□□□ -0.89
SSX4B-202ENST00000619890 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
SSX4B-202ENST00000619890 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
SSX4B-202ENST00000619890 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
SSX4B-202ENST00000619890 RNF17Q9BXT8 1623 aaKnown RBP9.5□□□□□ -0.89
SSX4B-202ENST00000619890 CCDC141Q6ZP82 1450 aa9.5□□□□□ -0.89
SSX4B-202ENST00000619890 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
SSX4B-202ENST00000619890 MIA2Q96PC5 1412 aa9.49□□□□□ -0.89
SSX4B-202ENST00000619890 POLR1AO95602 1720 aaPredicted RBP9.49□□□□□ -0.89
SSX4B-202ENST00000619890 TNRQ92752 1358 aa9.49□□□□□ -0.89
SSX4B-202ENST00000619890 MBD5Q9P267 1494 aa9.48□□□□□ -0.89
SSX4B-202ENST00000619890 STRCP1A6NGW2 1772 aa9.48□□□□□ -0.89
SSX4B-202ENST00000619890 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
SSX4B-202ENST00000619890 MAST1Q9Y2H9 1570 aa9.48□□□□□ -0.89
SSX4B-202ENST00000619890 SPAG9O60271 1321 aaKnown RBP9.48□□□□□ -0.89
SSX4B-202ENST00000619890 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
SSX4B-202ENST00000619890 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
SSX4B-202ENST00000619890 RXRBP28702 533 aa9.47□□□□□ -0.89
SSX4B-202ENST00000619890 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSX4B-202ENST00000619890 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
SSX4B-202ENST00000619890 HNRNPMP52272 730 aaKnown RBP eCLIP9.46□□□□□ -0.9
SSX4B-202ENST00000619890 FAM135AQ9P2D6 1515 aa9.46□□□□□ -0.9
SSX4B-202ENST00000619890 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
SSX4B-202ENST00000619890 A2MP01023 1474 aa9.45□□□□□ -0.9
SSX4B-202ENST00000619890 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
SSX4B-202ENST00000619890 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
SSX4B-202ENST00000619890 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
SSX4B-202ENST00000619890 ZRANB1Q9UGI0 708 aa9.44□□□□□ -0.9
SSX4B-202ENST00000619890 JCADQ9P266 1359 aa9.44□□□□□ -0.9
SSX4B-202ENST00000619890 SYNMO15061 1565 aa9.44□□□□□ -0.9
SSX4B-202ENST00000619890 EIF2AK4Q9P2K8 1649 aaKnown RBP9.43□□□□□ -0.9
SSX4B-202ENST00000619890 UGGT1Q9NYU2 1555 aa9.43□□□□□ -0.9
SSX4B-202ENST00000619890 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
SSX4B-202ENST00000619890 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
SSX4B-202ENST00000619890 FGD6Q6ZV73 1430 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms