RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
LINC00221-202ENST00000619530 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
LINC00221-202ENST00000619530 DAPK1P53355 1430 aa24.19■■□□□ 1.46
LINC00221-202ENST00000619530 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
LINC00221-202ENST00000619530 KDM5DQ9BY66 1539 aa24.16■■□□□ 1.46
LINC00221-202ENST00000619530 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
LINC00221-202ENST00000619530 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
LINC00221-202ENST00000619530 DMRT2Q9Y5R5 561 aa24.15■■□□□ 1.46
LINC00221-202ENST00000619530 STRCQ7RTU9 1775 aa24.15■■□□□ 1.46
LINC00221-202ENST00000619530 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
LINC00221-202ENST00000619530 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
LINC00221-202ENST00000619530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
LINC00221-202ENST00000619530 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
LINC00221-202ENST00000619530 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
LINC00221-202ENST00000619530 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
LINC00221-202ENST00000619530 RNF17Q9BXT8 1623 aaKnown RBP24.09■■□□□ 1.45
LINC00221-202ENST00000619530 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
LINC00221-202ENST00000619530 TNRQ92752 1358 aa24.09■■□□□ 1.45
LINC00221-202ENST00000619530 CAMSAP1Q5T5Y3 1602 aa24.08■■□□□ 1.45
LINC00221-202ENST00000619530 PZPP20742 1482 aa24.07■■□□□ 1.44
LINC00221-202ENST00000619530 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
LINC00221-202ENST00000619530 NCOA1Q15788 1441 aa24.06■■□□□ 1.44
LINC00221-202ENST00000619530 ABCC3O15438 1527 aa24.06■■□□□ 1.44
LINC00221-202ENST00000619530 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
LINC00221-202ENST00000619530 ERBINQ96RT1 1412 aa24.05■■□□□ 1.44
LINC00221-202ENST00000619530 MROH1Q8NDA8 1641 aa24.04■■□□□ 1.44
LINC00221-202ENST00000619530 CFAP65Q6ZU64 1925 aaKnown RBP24.03■■□□□ 1.44
LINC00221-202ENST00000619530 ITGAEP38570 1179 aa24.03■■□□□ 1.44
LINC00221-202ENST00000619530 ZNF142P52746 1687 aaPredicted RBP24.02■■□□□ 1.44
LINC00221-202ENST00000619530 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
LINC00221-202ENST00000619530 FBXO41Q8TF61 875 aa24.02■■□□□ 1.44
LINC00221-202ENST00000619530 CEP152O94986 1710 aa24.02■■□□□ 1.44
LINC00221-202ENST00000619530 A2ML1A8K2U0 1454 aa24.02■■□□□ 1.43
LINC00221-202ENST00000619530 PTPRTO14522 1441 aa24.01■■□□□ 1.43
LINC00221-202ENST00000619530 ZC3H13Q5T200 1668 aaKnown RBP24■■□□□ 1.43
LINC00221-202ENST00000619530 KANK1Q14678 1352 aa23.99■■□□□ 1.43
LINC00221-202ENST00000619530 PKD2Q13563 968 aa23.98■■□□□ 1.43
LINC00221-202ENST00000619530 ADGRL2O95490 1459 aa23.96■■□□□ 1.43
LINC00221-202ENST00000619530 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.42
LINC00221-202ENST00000619530 PRDM15P57071 1507 aaPredicted RBP23.94■■□□□ 1.42
LINC00221-202ENST00000619530 PLA2R1Q13018 1463 aa23.93■■□□□ 1.42
LINC00221-202ENST00000619530 ERVK-7P63135 1459 aa23.93■■□□□ 1.42
LINC00221-202ENST00000619530 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
LINC00221-202ENST00000619530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.42
LINC00221-202ENST00000619530 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
LINC00221-202ENST00000619530 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
LINC00221-202ENST00000619530 SPATA31D1Q6ZQQ2 1576 aa23.9■■□□□ 1.42
LINC00221-202ENST00000619530 ANKLE2Q86XL3 938 aa23.9■■□□□ 1.42
LINC00221-202ENST00000619530 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.41
LINC00221-202ENST00000619530 ARHGAP31Q2M1Z3 1444 aa23.87■■□□□ 1.41
LINC00221-202ENST00000619530 ZNF335Q9H4Z2 1342 aaPredicted RBP23.86■■□□□ 1.41
LINC00221-202ENST00000619530 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
LINC00221-202ENST00000619530 VWDEQ8N2E2 1590 aa23.83■■□□□ 1.4
LINC00221-202ENST00000619530 STAG3Q9UJ98 1225 aa23.82■■□□□ 1.4
LINC00221-202ENST00000619530 LMTK2Q8IWU2 1503 aa23.81■■□□□ 1.4
LINC00221-202ENST00000619530 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
LINC00221-202ENST00000619530 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
LINC00221-202ENST00000619530 IDI1Q13907 227 aa23.78■■□□□ 1.4
LINC00221-202ENST00000619530 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
LINC00221-202ENST00000619530 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.4
LINC00221-202ENST00000619530 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
LINC00221-202ENST00000619530 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
LINC00221-202ENST00000619530 EFCAB6Q5THR3 1501 aa23.76■■□□□ 1.39
LINC00221-202ENST00000619530 TXNDC2Q86VQ3 553 aa23.75■■□□□ 1.39
LINC00221-202ENST00000619530 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
LINC00221-202ENST00000619530 NUP155O75694 1391 aa23.73■■□□□ 1.39
LINC00221-202ENST00000619530 LTKP29376 864 aa23.72■■□□□ 1.39
LINC00221-202ENST00000619530 EID1Q9Y6B2 187 aa23.72■■□□□ 1.39
LINC00221-202ENST00000619530 UNC13BO14795 1591 aa23.71■■□□□ 1.39
LINC00221-202ENST00000619530 SYNMO15061 1565 aa23.71■■□□□ 1.39
LINC00221-202ENST00000619530 NOS1P29475 1434 aa23.71■■□□□ 1.39
LINC00221-202ENST00000619530 TET3O43151 1660 aa23.69■■□□□ 1.38
LINC00221-202ENST00000619530 MED14O60244 1454 aa23.69■■□□□ 1.38
LINC00221-202ENST00000619530 SLC52A1Q9NWF4 448 aa23.68■■□□□ 1.38
LINC00221-202ENST00000619530 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
LINC00221-202ENST00000619530 SCAF11Q99590 1463 aaKnown RBP23.67■■□□□ 1.38
LINC00221-202ENST00000619530 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
LINC00221-202ENST00000619530 TMEM2Q9UHN6 1383 aa23.66■■□□□ 1.38
LINC00221-202ENST00000619530 GCC2Q8IWJ2 1684 aa23.65■■□□□ 1.38
LINC00221-202ENST00000619530 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
LINC00221-202ENST00000619530 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
LINC00221-202ENST00000619530 UBAP1LF5GYI3 381 aa23.64■■□□□ 1.38
LINC00221-202ENST00000619530 SLIT1O75093 1534 aa23.64■■□□□ 1.37
LINC00221-202ENST00000619530 IQSEC2Q5JU85 1478 aa23.63■■□□□ 1.37
LINC00221-202ENST00000619530 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
LINC00221-202ENST00000619530 IQGAP3Q86VI3 1631 aa23.63■■□□□ 1.37
LINC00221-202ENST00000619530 E9PCH4 1651 aa23.62■■□□□ 1.37
LINC00221-202ENST00000619530 BCANQ96GW7 911 aa23.62■■□□□ 1.37
LINC00221-202ENST00000619530 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
LINC00221-202ENST00000619530 NAIPQ13075 1403 aa23.59■■□□□ 1.37
LINC00221-202ENST00000619530 ADGRB3O60242 1522 aa23.59■■□□□ 1.37
LINC00221-202ENST00000619530 CPS1P31327 1500 aa23.58■■□□□ 1.37
LINC00221-202ENST00000619530 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
LINC00221-202ENST00000619530 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
LINC00221-202ENST00000619530 PPP1R15AO75807 674 aaPredicted RBP23.55■■□□□ 1.36
LINC00221-202ENST00000619530 MYO5BQ9ULV0 1848 aa23.55■■□□□ 1.36
LINC00221-202ENST00000619530 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
LINC00221-202ENST00000619530 NUTM2DQ5VT03 806 aaPredicted RBP23.54■■□□□ 1.36
LINC00221-202ENST00000619530 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
LINC00221-202ENST00000619530 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms