RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 TSPY10P0CW01 314 aa30.62■■■□□ 2.49
PCSK6-218ENST00000619160 DISP1Q96F81 1524 aa30.62■■■□□ 2.49
PCSK6-218ENST00000619160 BRPF3Q9ULD4 1205 aa30.61■■■□□ 2.49
PCSK6-218ENST00000619160 GPATCH8Q9UKJ3 1502 aaKnown RBP30.61■■■□□ 2.49
PCSK6-218ENST00000619160 PDE3BQ13370 1112 aa30.58■■■□□ 2.49
PCSK6-218ENST00000619160 UHRF1BP1Q6BDS2 1440 aa30.57■■■□□ 2.48
PCSK6-218ENST00000619160 KIAA0586Q9BVV6 1533 aa30.57■■■□□ 2.48
PCSK6-218ENST00000619160 KIAA0556O60303 1618 aa30.56■■■□□ 2.48
PCSK6-218ENST00000619160 PLB1Q6P1J6 1458 aa30.56■■■□□ 2.48
PCSK6-218ENST00000619160 RAPGEF6Q8TEU7 1601 aa30.56■■■□□ 2.48
PCSK6-218ENST00000619160 CRBNQ96SW2 442 aa30.55■■■□□ 2.48
PCSK6-218ENST00000619160 MS4A1P11836 297 aa30.54■■■□□ 2.48
PCSK6-218ENST00000619160 ZNF608Q9ULD9 1512 aaPredicted RBP30.54■■■□□ 2.48
PCSK6-218ENST00000619160 PLEKHD1A6NEE1 506 aa30.53■■■□□ 2.48
PCSK6-218ENST00000619160 NBPF1Q3BBV0 1214 aa30.52■■■□□ 2.48
PCSK6-218ENST00000619160 HNRNPMP52272 730 aaKnown RBP eCLIP30.52■■■□□ 2.481e-6■■■□□ 18.4
PCSK6-218ENST00000619160 ADGRL2O95490 1459 aa30.49■■■□□ 2.47
PCSK6-218ENST00000619160 PPM1GO15355 546 aaPredicted RBP30.49■■■□□ 2.47
PCSK6-218ENST00000619160 CHMP7Q8WUX9 453 aaPredicted RBP30.48■■■□□ 2.47
PCSK6-218ENST00000619160 C9orf84Q5VXU9 1444 aa30.48■■■□□ 2.47
PCSK6-218ENST00000619160 SLC4A3P48751 1232 aa30.47■■■□□ 2.47
PCSK6-218ENST00000619160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.46■■■□□ 2.471e-6■□□□□ 11
PCSK6-218ENST00000619160 UBE2Q2Q8WVN8 375 aa30.46■■■□□ 2.47
PCSK6-218ENST00000619160 DAXXQ9UER7 740 aaPredicted RBP30.45■■■□□ 2.47
PCSK6-218ENST00000619160 PARD3Q8TEW0 1356 aa30.45■■■□□ 2.46
PCSK6-218ENST00000619160 USP35Q9P2H5 1018 aa30.45■■■□□ 2.46
PCSK6-218ENST00000619160 PANK3Q9H999 370 aa30.44■■■□□ 2.46
PCSK6-218ENST00000619160 C20orf194Q5TEA3 1177 aa30.43■■■□□ 2.46
PCSK6-218ENST00000619160 ADGBQ8N7X0 1667 aa30.43■■■□□ 2.46
PCSK6-218ENST00000619160 PER1O15534 1290 aaPredicted RBP30.42■■■□□ 2.46
PCSK6-218ENST00000619160 DDRGK1Q96HY6 314 aa30.41■■■□□ 2.46
PCSK6-218ENST00000619160 ARHGEF12Q9NZN5 1544 aa30.4■■■□□ 2.46
PCSK6-218ENST00000619160 ITSN2Q9NZM3 1697 aa30.39■■■□□ 2.46
PCSK6-218ENST00000619160 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
PCSK6-218ENST00000619160 MRC2Q9UBG0 1479 aa30.35■■■□□ 2.45
PCSK6-218ENST00000619160 CCDC144AA2RUR9 1427 aa30.34■■■□□ 2.45
PCSK6-218ENST00000619160 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
PCSK6-218ENST00000619160 ADAMTS8Q9UP79 889 aa30.33■■■□□ 2.45
PCSK6-218ENST00000619160 WASHC2CQ9Y4E1 1318 aa30.32■■■□□ 2.44
PCSK6-218ENST00000619160 DISP3Q9P2K9 1392 aa30.32■■■□□ 2.44
PCSK6-218ENST00000619160 RGS3P49796 1198 aa30.28■■■□□ 2.44
PCSK6-218ENST00000619160 TMF1P82094 1093 aa30.28■■■□□ 2.44
PCSK6-218ENST00000619160 WDR43Q15061 677 aaKnown RBP eCLIP30.28■■■□□ 2.44
PCSK6-218ENST00000619160 PRAG1Q86YV5 1406 aa30.27■■■□□ 2.44
PCSK6-218ENST00000619160 NFKBIBQ15653 356 aa30.27■■■□□ 2.44
PCSK6-218ENST00000619160 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
PCSK6-218ENST00000619160 GSE1Q14687 1217 aa30.27■■■□□ 2.44
PCSK6-218ENST00000619160 CARMIL2Q6F5E8 1435 aa30.26■■■□□ 2.43
PCSK6-218ENST00000619160 CROCC2H7BZ55 1655 aa30.26■■■□□ 2.43
PCSK6-218ENST00000619160 TESK2Q96S53 571 aa30.25■■■□□ 2.43
PCSK6-218ENST00000619160 FRAT1Q92837 279 aaPredicted RBP30.23■■■□□ 2.43
PCSK6-218ENST00000619160 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
PCSK6-218ENST00000619160 CENPQQ7L2Z9 268 aaPredicted RBP30.2■■■□□ 2.43
PCSK6-218ENST00000619160 KNSTRNQ9Y448 316 aa30.2■■■□□ 2.43
PCSK6-218ENST00000619160 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
PCSK6-218ENST00000619160 E9PCH4 1651 aa30.19■■■□□ 2.42
PCSK6-218ENST00000619160 SHANK2Q9UPX8 1470 aa30.19■■■□□ 2.42
PCSK6-218ENST00000619160 BLMP54132 1417 aaPredicted RBP30.18■■■□□ 2.42
PCSK6-218ENST00000619160 ERBINQ96RT1 1412 aa30.17■■■□□ 2.42
PCSK6-218ENST00000619160 FAM161AQ3B820 660 aa30.17■■■□□ 2.42
PCSK6-218ENST00000619160 KDM5DQ9BY66 1539 aa30.16■■■□□ 2.42
PCSK6-218ENST00000619160 FAM135AQ9P2D6 1515 aa30.16■■■□□ 2.42
PCSK6-218ENST00000619160 PTPRGP23470 1445 aa30.15■■■□□ 2.42
PCSK6-218ENST00000619160 KDM2BQ8NHM5 1336 aa30.15■■■□□ 2.42
PCSK6-218ENST00000619160 COL17A1Q9UMD9 1497 aaPredicted RBP30.15■■■□□ 2.42
PCSK6-218ENST00000619160 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.15■■■□□ 2.42
PCSK6-218ENST00000619160 GOLGA2Q08379 1002 aa30.14■■■□□ 2.42
PCSK6-218ENST00000619160 DUSP27Q5VZP5 1158 aa30.14■■■□□ 2.42
PCSK6-218ENST00000619160 CCDC146Q8IYE0 955 aa30.14■■■□□ 2.41
PCSK6-218ENST00000619160 ATP10BO94823 1461 aa30.13■■■□□ 2.41
PCSK6-218ENST00000619160 PLEKHH1Q9ULM0 1364 aa30.12■■■□□ 2.41
PCSK6-218ENST00000619160 ADCY10Q96PN6 1610 aa30.12■■■□□ 2.41
PCSK6-218ENST00000619160 ABCC10Q5T3U5 1492 aa30.12■■■□□ 2.41
PCSK6-218ENST00000619160 CDC42BPAQ5VT25 1732 aa30.12■■■□□ 2.41
PCSK6-218ENST00000619160 PPP2R1AP30153 589 aa30.11■■■□□ 2.41
PCSK6-218ENST00000619160 C8orf34Q49A92 452 aa30.1■■■□□ 2.41
PCSK6-218ENST00000619160 A2MP01023 1474 aa30.1■■■□□ 2.41
PCSK6-218ENST00000619160 GPRASP1Q5JY77 1395 aa30.07■■■□□ 2.4
PCSK6-218ENST00000619160 ZMYM4Q5VZL5 1548 aa30.07■■■□□ 2.4
PCSK6-218ENST00000619160 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
PCSK6-218ENST00000619160 FRAT2O75474 233 aaPredicted RBP30.06■■■□□ 2.4
PCSK6-218ENST00000619160 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
PCSK6-218ENST00000619160 PLEKHH2Q8IVE3 1493 aa30.05■■■□□ 2.4
PCSK6-218ENST00000619160 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
PCSK6-218ENST00000619160 PLA2R1Q13018 1463 aa30.03■■■□□ 2.4
PCSK6-218ENST00000619160 BCAR3O75815 825 aa30■■■□□ 2.39
PCSK6-218ENST00000619160 INSRP06213 1382 aa30■■■□□ 2.39
PCSK6-218ENST00000619160 APAF1O14727 1248 aa29.99■■■□□ 2.39
PCSK6-218ENST00000619160 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
PCSK6-218ENST00000619160 RSPH4AQ5TD94 716 aa29.99■■■□□ 2.39
PCSK6-218ENST00000619160 SLFN5Q08AF3 891 aa29.97■■■□□ 2.39
PCSK6-218ENST00000619160 SPINK5Q9NQ38 1064 aaPredicted RBP29.97■■■□□ 2.39
PCSK6-218ENST00000619160 AMER1Q5JTC6 1135 aaPredicted RBP29.95■■■□□ 2.39
PCSK6-218ENST00000619160 CANXP27824 592 aaKnown RBP29.95■■■□□ 2.38
PCSK6-218ENST00000619160 MAGI2Q86UL8 1455 aa29.94■■■□□ 2.38
PCSK6-218ENST00000619160 PRDM15P57071 1507 aaPredicted RBP29.93■■■□□ 2.38
PCSK6-218ENST00000619160 ZNF521Q96K83 1311 aa29.92■■■□□ 2.38
PCSK6-218ENST00000619160 ABCA8O94911 1581 aa29.91■■■□□ 2.38
PCSK6-218ENST00000619160 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.37
PCSK6-218ENST00000619160 CDCA8Q53HL2 280 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms