RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
TRAF4-217ENST00000618771 FGD6Q6ZV73 1430 aa34.12■■■■□ 3.05
TRAF4-217ENST00000618771 FAM135AQ9P2D6 1515 aa34.08■■■■□ 3.05
TRAF4-217ENST00000618771 TCOF1Q13428 1488 aaKnown RBP34.07■■■■□ 3.04
TRAF4-217ENST00000618771 NCKAP5LQ9HCH0 1330 aa34.06■■■■□ 3.04
TRAF4-217ENST00000618771 DNMT1P26358 1616 aaKnown RBP34.06■■■■□ 3.04
TRAF4-217ENST00000618771 DISP3Q9P2K9 1392 aa34.06■■■■□ 3.04
TRAF4-217ENST00000618771 PTPRKQ15262 1439 aa34.05■■■■□ 3.04
TRAF4-217ENST00000618771 KDM5DQ9BY66 1539 aa34.05■■■■□ 3.04
TRAF4-217ENST00000618771 EIF2AK4Q9P2K8 1649 aaKnown RBP34.05■■■■□ 3.04
TRAF4-217ENST00000618771 SHANK2Q9UPX8 1470 aa34.05■■■■□ 3.04
TRAF4-217ENST00000618771 MYO3AQ8NEV4 1616 aa34.04■■■■□ 3.04
TRAF4-217ENST00000618771 RNF17Q9BXT8 1623 aaKnown RBP34.04■■■■□ 3.04
TRAF4-217ENST00000618771 ABCC5O15440 1437 aa34.04■■■■□ 3.04
TRAF4-217ENST00000618771 DAPK1P53355 1430 aa34■■■■□ 3.03
TRAF4-217ENST00000618771 IQSEC2Q5JU85 1478 aa34■■■■□ 3.03
TRAF4-217ENST00000618771 ZNF142P52746 1687 aaPredicted RBP33.99■■■■□ 3.03
TRAF4-217ENST00000618771 DUOX2Q9NRD8 1548 aa33.99■■■■□ 3.03
TRAF4-217ENST00000618771 CEP170BQ9Y4F5 1589 aaPredicted RBP33.98■■■■□ 3.03
TRAF4-217ENST00000618771 WASHC2CQ9Y4E1 1318 aa33.96■■■■□ 3.03
TRAF4-217ENST00000618771 PKD2Q13563 968 aa33.95■■■■□ 3.03
TRAF4-217ENST00000618771 ILDR2Q71H61 639 aa33.95■■■■□ 3.03
TRAF4-217ENST00000618771 ZNF335Q9H4Z2 1342 aaPredicted RBP33.95■■■■□ 3.03
TRAF4-217ENST00000618771 PLA2R1Q13018 1463 aa33.95■■■■□ 3.02
TRAF4-217ENST00000618771 ZC3H13Q5T200 1668 aaKnown RBP33.93■■■■□ 3.02
TRAF4-217ENST00000618771 KIF15Q9NS87 1388 aa33.93■■■■□ 3.02
TRAF4-217ENST00000618771 PZPP20742 1482 aa33.93■■■■□ 3.02
TRAF4-217ENST00000618771 MROH1Q8NDA8 1641 aa33.91■■■■□ 3.02
TRAF4-217ENST00000618771 ABCC3O15438 1527 aa33.88■■■■□ 3.01
TRAF4-217ENST00000618771 CEP152O94986 1710 aa33.87■■■■□ 3.01
TRAF4-217ENST00000618771 ERBINQ96RT1 1412 aa33.87■■■■□ 3.01
TRAF4-217ENST00000618771 RRP7BPQ9NSQ0 103 aa33.86■■■■□ 3.01
TRAF4-217ENST00000618771 SPATA31D1Q6ZQQ2 1576 aa33.84■■■■□ 3.01
TRAF4-217ENST00000618771 A2ML1A8K2U0 1454 aa33.83■■■■□ 3.01
TRAF4-217ENST00000618771 FAM50AQ14320 339 aaKnown RBP33.83■■■■□ 3.01
TRAF4-217ENST00000618771 FBXO31Q5XUX0 539 aaPredicted RBP33.83■■■■□ 3.01
TRAF4-217ENST00000618771 TNRQ92752 1358 aa33.83■■■■□ 3.01
TRAF4-217ENST00000618771 ANKRD30AQ9BXX3 1397 aa33.83■■■■□ 3.01
TRAF4-217ENST00000618771 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
TRAF4-217ENST00000618771 CHIC2Q9UKJ5 165 aa33.81■■■■□ 3
TRAF4-217ENST00000618771 PRDM15P57071 1507 aaPredicted RBP33.8■■■■□ 3
TRAF4-217ENST00000618771 DEPDC5O75140 1603 aa33.79■■■■□ 3
TRAF4-217ENST00000618771 CFAP65Q6ZU64 1925 aaKnown RBP33.78■■■■□ 3
TRAF4-217ENST00000618771 ADGRL2O95490 1459 aa33.77■■■■□ 3
TRAF4-217ENST00000618771 SOCS7O14512 581 aa33.76■■■□□ 2.99
TRAF4-217ENST00000618771 NLRP1Q9C000 1473 aa33.71■■■□□ 2.99
TRAF4-217ENST00000618771 ERVK-7P63135 1459 aa33.69■■■□□ 2.98
TRAF4-217ENST00000618771 POLR1AO95602 1720 aaPredicted RBP33.68■■■□□ 2.98
TRAF4-217ENST00000618771 PPARGC1BQ86YN6 1023 aaKnown RBP33.67■■■□□ 2.98
TRAF4-217ENST00000618771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.66■■■□□ 2.989e-7■■■□□ 14.9
TRAF4-217ENST00000618771 KANK1Q14678 1352 aa33.65■■■□□ 2.98
TRAF4-217ENST00000618771 NEURL4Q96JN8 1562 aa33.64■■■□□ 2.98
TRAF4-217ENST00000618771 UGGT1Q9NYU2 1555 aa33.63■■■□□ 2.97
TRAF4-217ENST00000618771 ARHGAP31Q2M1Z3 1444 aa33.62■■■□□ 2.97
TRAF4-217ENST00000618771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.62■■■□□ 2.971e-7■■□□□ 12.7
TRAF4-217ENST00000618771 VWDEQ8N2E2 1590 aa33.61■■■□□ 2.97
TRAF4-217ENST00000618771 ANKLE2Q86XL3 938 aa33.61■■■□□ 2.97
TRAF4-217ENST00000618771 THEMISQ8N1K5 641 aaPredicted RBP33.6■■■□□ 2.97
TRAF4-217ENST00000618771 ANKRD50Q9ULJ7 1429 aa33.59■■■□□ 2.97
TRAF4-217ENST00000618771 LMTK2Q8IWU2 1503 aa33.58■■■□□ 2.97
TRAF4-217ENST00000618771 SCAF1Q9H7N4 1312 aaKnown RBP33.56■■■□□ 2.96
TRAF4-217ENST00000618771 CPS1P31327 1500 aa33.56■■■□□ 2.96
TRAF4-217ENST00000618771 PIP4K2BP78356 416 aa33.53■■■□□ 2.96
TRAF4-217ENST00000618771 ROCK1Q13464 1354 aa33.52■■■□□ 2.96
TRAF4-217ENST00000618771 UBR1Q8IWV7 1749 aa33.52■■■□□ 2.96
TRAF4-217ENST00000618771 TOM1O60784 492 aa33.51■■■□□ 2.95
TRAF4-217ENST00000618771 EFCAB6Q5THR3 1501 aa33.5■■■□□ 2.95
TRAF4-217ENST00000618771 NPHP4O75161 1426 aaPredicted RBP33.49■■■□□ 2.95
TRAF4-217ENST00000618771 HSPA1LP34931 641 aa33.48■■■□□ 2.95
TRAF4-217ENST00000618771 UNC13BO14795 1591 aa33.47■■■□□ 2.95
TRAF4-217ENST00000618771 MED14O60244 1454 aa33.46■■■□□ 2.95
TRAF4-217ENST00000618771 ITGAEP38570 1179 aa33.45■■■□□ 2.95
TRAF4-217ENST00000618771 PIK3C2BO00750 1634 aa33.43■■■□□ 2.94
TRAF4-217ENST00000618771 TET3O43151 1660 aa33.43■■■□□ 2.94
TRAF4-217ENST00000618771 RRBP1Q9P2E9 1410 aaKnown RBP33.41■■■□□ 2.94
TRAF4-217ENST00000618771 IQGAP1P46940 1657 aa33.41■■■□□ 2.94
TRAF4-217ENST00000618771 GCC2Q8IWJ2 1684 aa33.4■■■□□ 2.94
TRAF4-217ENST00000618771 SYNMO15061 1565 aa33.4■■■□□ 2.94
TRAF4-217ENST00000618771 KDM5AP29375 1690 aaKnown RBP33.37■■■□□ 2.93
TRAF4-217ENST00000618771 RPRD2Q5VT52 1461 aaKnown RBP33.37■■■□□ 2.93
TRAF4-217ENST00000618771 NOS1P29475 1434 aa33.36■■■□□ 2.93
TRAF4-217ENST00000618771 SLIT1O75093 1534 aa33.34■■■□□ 2.93
TRAF4-217ENST00000618771 IQGAP3Q86VI3 1631 aa33.33■■■□□ 2.93
TRAF4-217ENST00000618771 ARHGAP23Q9P227 1491 aa33.32■■■□□ 2.92
TRAF4-217ENST00000618771 SCAF11Q99590 1463 aaKnown RBP33.31■■■□□ 2.92
TRAF4-217ENST00000618771 MED1Q15648 1581 aaPredicted RBP33.31■■■□□ 2.92
TRAF4-217ENST00000618771 STRCP1A6NGW2 1772 aa33.31■■■□□ 2.92
TRAF4-217ENST00000618771 ALKQ9UM73 1620 aa33.3■■■□□ 2.92
TRAF4-217ENST00000618771 IDI1Q13907 227 aa33.29■■■□□ 2.92
TRAF4-217ENST00000618771 STAG3Q9UJ98 1225 aa33.29■■■□□ 2.92
TRAF4-217ENST00000618771 E9PCH4 1651 aa33.29■■■□□ 2.92
TRAF4-217ENST00000618771 LRRC7Q96NW7 1537 aa33.27■■■□□ 2.92
TRAF4-217ENST00000618771 ADGRB3O60242 1522 aa33.26■■■□□ 2.91
TRAF4-217ENST00000618771 TMEM2Q9UHN6 1383 aa33.24■■■□□ 2.91
TRAF4-217ENST00000618771 TXNDC2Q86VQ3 553 aa33.23■■■□□ 2.91
TRAF4-217ENST00000618771 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
TRAF4-217ENST00000618771 NUP155O75694 1391 aa33.22■■■□□ 2.91
TRAF4-217ENST00000618771 LTKP29376 864 aa33.22■■■□□ 2.91
TRAF4-217ENST00000618771 SENP3Q9H4L4 574 aaPredicted RBP33.22■■■□□ 2.91
TRAF4-217ENST00000618771 MYO5BQ9ULV0 1848 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms