RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 MYO3AQ8NEV4 1616 aa34.43■■■■□ 3.1
SYNGR3-206ENST00000618464 NCKAP5LQ9HCH0 1330 aa34.41■■■■□ 3.1
SYNGR3-206ENST00000618464 FGD6Q6ZV73 1430 aa34.4■■■■□ 3.1
SYNGR3-206ENST00000618464 ZNF142P52746 1687 aaPredicted RBP34.38■■■■□ 3.09
SYNGR3-206ENST00000618464 LTBP4Q8N2S1 1624 aa34.38■■■■□ 3.09
SYNGR3-206ENST00000618464 CEP170BQ9Y4F5 1589 aaPredicted RBP34.37■■■■□ 3.09
SYNGR3-206ENST00000618464 ABCC5O15440 1437 aa34.35■■■■□ 3.09
SYNGR3-206ENST00000618464 KDM5DQ9BY66 1539 aa34.35■■■■□ 3.09
SYNGR3-206ENST00000618464 CROCC2H7BZ55 1655 aa34.33■■■■□ 3.09
SYNGR3-206ENST00000618464 TCOF1Q13428 1488 aaKnown RBP34.32■■■■□ 3.08
SYNGR3-206ENST00000618464 WASHC2CQ9Y4E1 1318 aa34.31■■■■□ 3.08
SYNGR3-206ENST00000618464 FBXO31Q5XUX0 539 aaPredicted RBP34.31■■■■□ 3.08
SYNGR3-206ENST00000618464 PLA2R1Q13018 1463 aa34.31■■■■□ 3.08
SYNGR3-206ENST00000618464 DAPK1P53355 1430 aa34.3■■■■□ 3.08
SYNGR3-206ENST00000618464 SHANK2Q9UPX8 1470 aa34.29■■■■□ 3.08
SYNGR3-206ENST00000618464 PKD2Q13563 968 aa34.28■■■■□ 3.08
SYNGR3-206ENST00000618464 DNMT1P26358 1616 aaKnown RBP34.28■■■■□ 3.08
SYNGR3-206ENST00000618464 FAM135AQ9P2D6 1515 aa34.28■■■■□ 3.08
SYNGR3-206ENST00000618464 RNF17Q9BXT8 1623 aaKnown RBP34.27■■■■□ 3.08
SYNGR3-206ENST00000618464 DUOX2Q9NRD8 1548 aa34.26■■■■□ 3.08
SYNGR3-206ENST00000618464 A2ML1A8K2U0 1454 aa34.26■■■■□ 3.07
SYNGR3-206ENST00000618464 EIF2AK4Q9P2K8 1649 aaKnown RBP34.26■■■■□ 3.07
SYNGR3-206ENST00000618464 KIF15Q9NS87 1388 aa34.25■■■■□ 3.07
SYNGR3-206ENST00000618464 RRP7BPQ9NSQ0 103 aa34.25■■■■□ 3.07
SYNGR3-206ENST00000618464 ZNF335Q9H4Z2 1342 aaPredicted RBP34.24■■■■□ 3.07
SYNGR3-206ENST00000618464 PZPP20742 1482 aa34.23■■■■□ 3.07
SYNGR3-206ENST00000618464 TNRQ92752 1358 aa34.23■■■■□ 3.07
SYNGR3-206ENST00000618464 CHIC2Q9UKJ5 165 aa34.21■■■■□ 3.07
SYNGR3-206ENST00000618464 FAM50AQ14320 339 aaKnown RBP34.2■■■■□ 3.07
SYNGR3-206ENST00000618464 IQSEC2Q5JU85 1478 aa34.19■■■■□ 3.06
SYNGR3-206ENST00000618464 ABCC3O15438 1527 aa34.18■■■■□ 3.06
SYNGR3-206ENST00000618464 MROH1Q8NDA8 1641 aa34.18■■■■□ 3.06
SYNGR3-206ENST00000618464 ZC3H13Q5T200 1668 aaKnown RBP34.14■■■■□ 3.06
SYNGR3-206ENST00000618464 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
SYNGR3-206ENST00000618464 ANKRD30AQ9BXX3 1397 aa34.12■■■■□ 3.05
SYNGR3-206ENST00000618464 CEP152O94986 1710 aa34.11■■■■□ 3.05
SYNGR3-206ENST00000618464 PPARGC1BQ86YN6 1023 aaKnown RBP34.11■■■■□ 3.05
SYNGR3-206ENST00000618464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.07■■■■□ 3.04
SYNGR3-206ENST00000618464 PRDM15P57071 1507 aaPredicted RBP34.05■■■■□ 3.04
SYNGR3-206ENST00000618464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.05■■■■□ 3.04
SYNGR3-206ENST00000618464 NEURL4Q96JN8 1562 aa34.05■■■■□ 3.04
SYNGR3-206ENST00000618464 POLR1AO95602 1720 aaPredicted RBP34.04■■■■□ 3.04
SYNGR3-206ENST00000618464 NLRP1Q9C000 1473 aa34.04■■■■□ 3.04
SYNGR3-206ENST00000618464 THEMISQ8N1K5 641 aaPredicted RBP34.02■■■■□ 3.04
SYNGR3-206ENST00000618464 ADGRL2O95490 1459 aa34.01■■■■□ 3.04
SYNGR3-206ENST00000618464 UGGT1Q9NYU2 1555 aa34.01■■■■□ 3.03
SYNGR3-206ENST00000618464 DEPDC5O75140 1603 aa34■■■■□ 3.03
SYNGR3-206ENST00000618464 ERVK-7P63135 1459 aa34■■■■□ 3.03
SYNGR3-206ENST00000618464 SPATA31D1Q6ZQQ2 1576 aa33.99■■■■□ 3.03
SYNGR3-206ENST00000618464 UBAP1LF5GYI3 381 aa33.99■■■■□ 3.03
SYNGR3-206ENST00000618464 ANKLE2Q86XL3 938 aa33.99■■■■□ 3.03
SYNGR3-206ENST00000618464 DISP3Q9P2K9 1392 aa33.97■■■■□ 3.03
SYNGR3-206ENST00000618464 CFAP65Q6ZU64 1925 aaKnown RBP33.96■■■■□ 3.03
SYNGR3-206ENST00000618464 KANK1Q14678 1352 aa33.96■■■■□ 3.03
SYNGR3-206ENST00000618464 ARHGAP31Q2M1Z3 1444 aa33.89■■■■□ 3.02
SYNGR3-206ENST00000618464 MED14O60244 1454 aa33.88■■■■□ 3.01
SYNGR3-206ENST00000618464 NPHP4O75161 1426 aaPredicted RBP33.88■■■■□ 3.01
SYNGR3-206ENST00000618464 ANKRD50Q9ULJ7 1429 aa33.87■■■■□ 3.01
SYNGR3-206ENST00000618464 ITGAEP38570 1179 aa33.86■■■■□ 3.01
SYNGR3-206ENST00000618464 VWDEQ8N2E2 1590 aa33.85■■■■□ 3.01
SYNGR3-206ENST00000618464 CPS1P31327 1500 aa33.85■■■■□ 3.01
SYNGR3-206ENST00000618464 ILDR2Q71H61 639 aa33.85■■■■□ 3.01
SYNGR3-206ENST00000618464 LMTK2Q8IWU2 1503 aa33.83■■■■□ 3.01
SYNGR3-206ENST00000618464 IQGAP1P46940 1657 aa33.8■■■■□ 3
SYNGR3-206ENST00000618464 UBR1Q8IWV7 1749 aa33.79■■■■□ 3
SYNGR3-206ENST00000618464 ROCK1Q13464 1354 aa33.77■■■■□ 3
SYNGR3-206ENST00000618464 EFCAB6Q5THR3 1501 aa33.76■■■■□ 3
SYNGR3-206ENST00000618464 PIP4K2BP78356 416 aa33.73■■■□□ 2.99
SYNGR3-206ENST00000618464 TOM1O60784 492 aa33.72■■■□□ 2.99
SYNGR3-206ENST00000618464 SCAF1Q9H7N4 1312 aaKnown RBP33.72■■■□□ 2.99
SYNGR3-206ENST00000618464 PIK3C2BO00750 1634 aa33.7■■■□□ 2.99
SYNGR3-206ENST00000618464 LTKP29376 864 aa33.69■■■□□ 2.98
SYNGR3-206ENST00000618464 STRCP1A6NGW2 1772 aa33.69■■■□□ 2.98
SYNGR3-206ENST00000618464 UNC13BO14795 1591 aa33.68■■■□□ 2.98
SYNGR3-206ENST00000618464 SYNMO15061 1565 aa33.68■■■□□ 2.98
SYNGR3-206ENST00000618464 SCAF11Q99590 1463 aaKnown RBP33.68■■■□□ 2.98
SYNGR3-206ENST00000618464 TXNDC2Q86VQ3 553 aa33.67■■■□□ 2.98
SYNGR3-206ENST00000618464 ARHGAP23Q9P227 1491 aa33.67■■■□□ 2.98
SYNGR3-206ENST00000618464 SLIT1O75093 1534 aa33.66■■■□□ 2.98
SYNGR3-206ENST00000618464 STAG3Q9UJ98 1225 aa33.66■■■□□ 2.98
SYNGR3-206ENST00000618464 NOS1P29475 1434 aa33.65■■■□□ 2.98
SYNGR3-206ENST00000618464 HSPA1LP34931 641 aa33.65■■■□□ 2.98
SYNGR3-206ENST00000618464 TET3O43151 1660 aa33.64■■■□□ 2.98
SYNGR3-206ENST00000618464 RRBP1Q9P2E9 1410 aaKnown RBP33.64■■■□□ 2.98
SYNGR3-206ENST00000618464 IDI1Q13907 227 aa33.64■■■□□ 2.98
SYNGR3-206ENST00000618464 ALKQ9UM73 1620 aa33.62■■■□□ 2.97
SYNGR3-206ENST00000618464 LRRC7Q96NW7 1537 aa33.62■■■□□ 2.97
SYNGR3-206ENST00000618464 RPRD2Q5VT52 1461 aaKnown RBP33.61■■■□□ 2.97
SYNGR3-206ENST00000618464 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
SYNGR3-206ENST00000618464 EID1Q9Y6B2 187 aa33.58■■■□□ 2.97
SYNGR3-206ENST00000618464 SOCS7O14512 581 aa33.57■■■□□ 2.96
SYNGR3-206ENST00000618464 TMEM2Q9UHN6 1383 aa33.57■■■□□ 2.96
SYNGR3-206ENST00000618464 IQGAP3Q86VI3 1631 aa33.55■■■□□ 2.96
SYNGR3-206ENST00000618464 NUP155O75694 1391 aa33.55■■■□□ 2.96
SYNGR3-206ENST00000618464 ADGRB3O60242 1522 aa33.53■■■□□ 2.96
SYNGR3-206ENST00000618464 KDM5AP29375 1690 aaKnown RBP33.53■■■□□ 2.96
SYNGR3-206ENST00000618464 SLC52A1Q9NWF4 448 aa33.53■■■□□ 2.96
SYNGR3-206ENST00000618464 E9PCH4 1651 aa33.52■■■□□ 2.96
SYNGR3-206ENST00000618464 SENP3Q9H4L4 574 aaPredicted RBP33.42■■■□□ 2.94
SYNGR3-206ENST00000618464 NAIPQ13075 1403 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms