RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
UPK1A-204ENST00000617999 AGLP35573 1532 aa22.85■■□□□ 1.25
UPK1A-204ENST00000617999 IQGAP3Q86VI3 1631 aa22.84■■□□□ 1.25
UPK1A-204ENST00000617999 CEP152O94986 1710 aa22.83■■□□□ 1.25
UPK1A-204ENST00000617999 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
UPK1A-204ENST00000617999 PZPP20742 1482 aa22.79■■□□□ 1.24
UPK1A-204ENST00000617999 ZC3H13Q5T200 1668 aaKnown RBP22.77■■□□□ 1.24
UPK1A-204ENST00000617999 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
UPK1A-204ENST00000617999 TET3O43151 1660 aa22.74■■□□□ 1.23
UPK1A-204ENST00000617999 ABCC3O15438 1527 aa22.72■■□□□ 1.23
UPK1A-204ENST00000617999 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
UPK1A-204ENST00000617999 KIF3BO15066 747 aa22.72■■□□□ 1.23
UPK1A-204ENST00000617999 HRCP23327 699 aa22.72■■□□□ 1.23
UPK1A-204ENST00000617999 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
UPK1A-204ENST00000617999 E9PCH4 1651 aa22.7■■□□□ 1.22
UPK1A-204ENST00000617999 CLTCQ00610 1675 aaKnown RBP22.69■■□□□ 1.22
UPK1A-204ENST00000617999 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
UPK1A-204ENST00000617999 LMTK2Q8IWU2 1503 aa22.69■■□□□ 1.22
UPK1A-204ENST00000617999 FER1L4A9Z1Z3 1794 aa22.68■■□□□ 1.22
UPK1A-204ENST00000617999 NUP155O75694 1391 aa22.68■■□□□ 1.22
UPK1A-204ENST00000617999 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
UPK1A-204ENST00000617999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.21
UPK1A-204ENST00000617999 MADDQ8WXG6 1647 aa22.62■■□□□ 1.21
UPK1A-204ENST00000617999 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
UPK1A-204ENST00000617999 MROH2AA6NES4 1674 aa22.62■■□□□ 1.21
UPK1A-204ENST00000617999 ADAMTSL3P82987 1691 aa22.62■■□□□ 1.21
UPK1A-204ENST00000617999 KANK1Q14678 1352 aa22.61■■□□□ 1.21
UPK1A-204ENST00000617999 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
UPK1A-204ENST00000617999 GGT6Q6P531 493 aa22.59■■□□□ 1.21
UPK1A-204ENST00000617999 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.2
UPK1A-204ENST00000617999 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
UPK1A-204ENST00000617999 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
UPK1A-204ENST00000617999 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
UPK1A-204ENST00000617999 MLECQ14165 292 aa22.55■■□□□ 1.2
UPK1A-204ENST00000617999 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
UPK1A-204ENST00000617999 CFAP65Q6ZU64 1925 aaKnown RBP22.54■■□□□ 1.2
UPK1A-204ENST00000617999 NPATQ14207 1427 aa22.54■■□□□ 1.2
UPK1A-204ENST00000617999 C3P01024 1663 aa22.53■■□□□ 1.2
UPK1A-204ENST00000617999 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
UPK1A-204ENST00000617999 TRPM2O94759 1503 aa22.52■■□□□ 1.19
UPK1A-204ENST00000617999 PKD2Q13563 968 aa22.5■■□□□ 1.19
UPK1A-204ENST00000617999 FOXD1Q16676 465 aa22.5■■□□□ 1.19
UPK1A-204ENST00000617999 SYNMO15061 1565 aa22.5■■□□□ 1.19
UPK1A-204ENST00000617999 ARHGAP31Q2M1Z3 1444 aa22.49■■□□□ 1.19
UPK1A-204ENST00000617999 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
UPK1A-204ENST00000617999 WASHC2CQ9Y4E1 1318 aa22.49■■□□□ 1.19
UPK1A-204ENST00000617999 PLA2R1Q13018 1463 aa22.48■■□□□ 1.19
UPK1A-204ENST00000617999 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
UPK1A-204ENST00000617999 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
UPK1A-204ENST00000617999 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
UPK1A-204ENST00000617999 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
UPK1A-204ENST00000617999 ERVK-7P63135 1459 aa22.46■■□□□ 1.19
UPK1A-204ENST00000617999 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
UPK1A-204ENST00000617999 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
UPK1A-204ENST00000617999 PIK3C2BO00750 1634 aa22.45■■□□□ 1.18
UPK1A-204ENST00000617999 PTPRTO14522 1441 aa22.44■■□□□ 1.18
UPK1A-204ENST00000617999 NOS1P29475 1434 aa22.43■■□□□ 1.18
UPK1A-204ENST00000617999 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
UPK1A-204ENST00000617999 KIF1BO60333 1816 aa22.37■■□□□ 1.17
UPK1A-204ENST00000617999 ZMYM3Q14202 1370 aa22.37■■□□□ 1.17
UPK1A-204ENST00000617999 MYO5BQ9ULV0 1848 aa22.36■■□□□ 1.17
UPK1A-204ENST00000617999 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
UPK1A-204ENST00000617999 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
UPK1A-204ENST00000617999 ESF1Q9H501 851 aaKnown RBP22.34■■□□□ 1.17
UPK1A-204ENST00000617999 ADGRB3O60242 1522 aa22.34■■□□□ 1.17
UPK1A-204ENST00000617999 PTPRMP28827 1452 aa22.32■■□□□ 1.16
UPK1A-204ENST00000617999 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
UPK1A-204ENST00000617999 FBXO31Q5XUX0 539 aaPredicted RBP22.3■■□□□ 1.16
UPK1A-204ENST00000617999 IFT172Q9UG01 1749 aa22.29■■□□□ 1.16
UPK1A-204ENST00000617999 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
UPK1A-204ENST00000617999 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
UPK1A-204ENST00000617999 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
UPK1A-204ENST00000617999 TNRQ92752 1358 aa22.27■■□□□ 1.16
UPK1A-204ENST00000617999 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
UPK1A-204ENST00000617999 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
UPK1A-204ENST00000617999 CEBPAP49715 358 aaPredicted RBP22.26■■□□□ 1.15
UPK1A-204ENST00000617999 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
UPK1A-204ENST00000617999 PPLO60437 1756 aa22.23■■□□□ 1.15
UPK1A-204ENST00000617999 CEP170BQ9Y4F5 1589 aaPredicted RBP22.22■■□□□ 1.15
UPK1A-204ENST00000617999 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
UPK1A-204ENST00000617999 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
UPK1A-204ENST00000617999 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
UPK1A-204ENST00000617999 NLRP1Q9C000 1473 aa22.21■■□□□ 1.15
UPK1A-204ENST00000617999 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
UPK1A-204ENST00000617999 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
UPK1A-204ENST00000617999 NEXMIFQ5QGS0 1516 aa22.17■■□□□ 1.14
UPK1A-204ENST00000617999 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
UPK1A-204ENST00000617999 IDI1Q13907 227 aa22.14■■□□□ 1.13
UPK1A-204ENST00000617999 SLC52A1Q9NWF4 448 aa22.14■■□□□ 1.13
UPK1A-204ENST00000617999 MYOM2P54296 1465 aa22.1■■□□□ 1.13
UPK1A-204ENST00000617999 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
UPK1A-204ENST00000617999 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
UPK1A-204ENST00000617999 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
UPK1A-204ENST00000617999 ZFYVE9O95405 1425 aa22.06■■□□□ 1.12
UPK1A-204ENST00000617999 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
UPK1A-204ENST00000617999 TRPM1Q7Z4N2 1603 aa22.06■■□□□ 1.12
UPK1A-204ENST00000617999 SLIT1O75093 1534 aa22.06■■□□□ 1.12
UPK1A-204ENST00000617999 ARHGAP23Q9P227 1491 aa22.04■■□□□ 1.12
UPK1A-204ENST00000617999 NRXN1Q9ULB1 1477 aa22.04■■□□□ 1.12
UPK1A-204ENST00000617999 POLR1AO95602 1720 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms