RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
POLR2A-209ENST00000617998 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
POLR2A-209ENST00000617998 NCBP3Q53F19 620 aaKnown RBP14.11□□□□□ -0.15
POLR2A-209ENST00000617998 ABTB2Q8N961 1025 aa14.11□□□□□ -0.15
POLR2A-209ENST00000617998 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
POLR2A-209ENST00000617998 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
POLR2A-209ENST00000617998 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
POLR2A-209ENST00000617998 STK31Q9BXU1 1019 aa14.1□□□□□ -0.15
POLR2A-209ENST00000617998 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
POLR2A-209ENST00000617998 KCNJ4P48050 445 aa14.1□□□□□ -0.15
POLR2A-209ENST00000617998 KRI1Q8N9T8 703 aaKnown RBP14.1□□□□□ -0.15
POLR2A-209ENST00000617998 NLRP6P59044 892 aa14.1□□□□□ -0.15
POLR2A-209ENST00000617998 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
POLR2A-209ENST00000617998 FGD1P98174 961 aa14.09□□□□□ -0.15
POLR2A-209ENST00000617998 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
POLR2A-209ENST00000617998 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
POLR2A-209ENST00000617998 NBPF8Q3BBV2 869 aa14.08□□□□□ -0.15
POLR2A-209ENST00000617998 NBPF14Q5TI25 921 aa14.08□□□□□ -0.15
POLR2A-209ENST00000617998 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
POLR2A-209ENST00000617998 DHX57Q6P158 1386 aaKnown RBP14.08□□□□□ -0.16
POLR2A-209ENST00000617998 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
POLR2A-209ENST00000617998 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
POLR2A-209ENST00000617998 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
POLR2A-209ENST00000617998 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
POLR2A-209ENST00000617998 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
POLR2A-209ENST00000617998 CFTRP13569 1480 aa14.07□□□□□ -0.16
POLR2A-209ENST00000617998 NAP1L2Q9ULW6 460 aaPredicted RBP14.07□□□□□ -0.16
POLR2A-209ENST00000617998 CCDC144AA2RUR9 1427 aa14.07□□□□□ -0.16
POLR2A-209ENST00000617998 CCAR1Q8IX12 1150 aaKnown RBP14.06□□□□□ -0.16
POLR2A-209ENST00000617998 NOL10Q9BSC4 688 aaKnown RBP14.06□□□□□ -0.16
POLR2A-209ENST00000617998 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
POLR2A-209ENST00000617998 IGF1RP08069 1367 aa14.05□□□□□ -0.16
POLR2A-209ENST00000617998 CASC1Q6TDU7 716 aa14.04□□□□□ -0.16
POLR2A-209ENST00000617998 PMFBP1Q8TBY8 1022 aa14.04□□□□□ -0.16
POLR2A-209ENST00000617998 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
POLR2A-209ENST00000617998 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
POLR2A-209ENST00000617998 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
POLR2A-209ENST00000617998 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
POLR2A-209ENST00000617998 VPS37DQ86XT2 251 aa14.01□□□□□ -0.17
POLR2A-209ENST00000617998 MSH6P52701 1360 aa14.01□□□□□ -0.17
POLR2A-209ENST00000617998 NLRP13Q86W25 1043 aa14.01□□□□□ -0.17
POLR2A-209ENST00000617998 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
POLR2A-209ENST00000617998 WDHD1O75717 1129 aaPredicted RBP14.01□□□□□ -0.17
POLR2A-209ENST00000617998 SIN3AQ96ST3 1273 aa14□□□□□ -0.17
POLR2A-209ENST00000617998 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
POLR2A-209ENST00000617998 LMOD3Q0VAK6 560 aa13.99□□□□□ -0.17
POLR2A-209ENST00000617998 PLB1Q6P1J6 1458 aa13.99□□□□□ -0.17
POLR2A-209ENST00000617998 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
POLR2A-209ENST00000617998 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
POLR2A-209ENST00000617998 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
POLR2A-209ENST00000617998 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
POLR2A-209ENST00000617998 MS4A1P11836 297 aa13.97□□□□□ -0.17
POLR2A-209ENST00000617998 KIF15Q9NS87 1388 aa13.97□□□□□ -0.17
POLR2A-209ENST00000617998 KANK4Q5T7N3 995 aaPredicted RBP13.97□□□□□ -0.17
POLR2A-209ENST00000617998 RAD21O60216 631 aa13.97□□□□□ -0.17
POLR2A-209ENST00000617998 POLD1P28340 1107 aa13.96□□□□□ -0.17
POLR2A-209ENST00000617998 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
POLR2A-209ENST00000617998 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
POLR2A-209ENST00000617998 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
POLR2A-209ENST00000617998 LRPPRCP42704 1394 aaKnown RBP13.95□□□□□ -0.18
POLR2A-209ENST00000617998 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
POLR2A-209ENST00000617998 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
POLR2A-209ENST00000617998 DENND4BO75064 1496 aaPredicted RBP13.94□□□□□ -0.18
POLR2A-209ENST00000617998 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
POLR2A-209ENST00000617998 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
POLR2A-209ENST00000617998 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
POLR2A-209ENST00000617998 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
POLR2A-209ENST00000617998 ZC3H6P61129 1189 aaKnown RBP13.93□□□□□ -0.18
POLR2A-209ENST00000617998 SMG6Q86US8 1419 aaKnown RBP13.92□□□□□ -0.18
POLR2A-209ENST00000617998 HSP90B1P14625 803 aaKnown RBP13.91□□□□□ -0.18
POLR2A-209ENST00000617998 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
POLR2A-209ENST00000617998 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
POLR2A-209ENST00000617998 TMEM132EQ6IEE7 984 aa13.91□□□□□ -0.18
POLR2A-209ENST00000617998 EIF2S2P20042 333 aaKnown RBP13.9□□□□□ -0.18
POLR2A-209ENST00000617998 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
POLR2A-209ENST00000617998 SETD5Q9C0A6 1442 aa13.9□□□□□ -0.18
POLR2A-209ENST00000617998 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.19
POLR2A-209ENST00000617998 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
POLR2A-209ENST00000617998 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
POLR2A-209ENST00000617998 SLC4A10Q6U841 1118 aa13.89□□□□□ -0.19
POLR2A-209ENST00000617998 GRM1Q13255 1194 aa13.88□□□□□ -0.19
POLR2A-209ENST00000617998 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
POLR2A-209ENST00000617998 ZRSR1Q15695 479 aaKnown RBP13.88□□□□□ -0.19
POLR2A-209ENST00000617998 KIF6Q6ZMV9 814 aa13.88□□□□□ -0.19
POLR2A-209ENST00000617998 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
POLR2A-209ENST00000617998 TOMM22Q9NS69 142 aa13.88□□□□□ -0.19
POLR2A-209ENST00000617998 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
POLR2A-209ENST00000617998 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
POLR2A-209ENST00000617998 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
POLR2A-209ENST00000617998 CABP4P57796 275 aa13.87□□□□□ -0.19
POLR2A-209ENST00000617998 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
POLR2A-209ENST00000617998 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
POLR2A-209ENST00000617998 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
POLR2A-209ENST00000617998 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
POLR2A-209ENST00000617998 TTLL12Q14166 644 aaPredicted RBP13.85□□□□□ -0.19
POLR2A-209ENST00000617998 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
POLR2A-209ENST00000617998 EXOC5O00471 708 aa13.85□□□□□ -0.19
POLR2A-209ENST00000617998 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
POLR2A-209ENST00000617998 CENPJQ9HC77 1338 aaPredicted RBP13.85□□□□□ -0.19
POLR2A-209ENST00000617998 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms