RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
PHF20-216ENST00000617560 TNRQ92752 1358 aa21.81■■□□□ 1.08
PHF20-216ENST00000617560 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
PHF20-216ENST00000617560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.8■■□□□ 1.08
PHF20-216ENST00000617560 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.08
PHF20-216ENST00000617560 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
PHF20-216ENST00000617560 CCNB3Q8WWL7 1395 aa21.76■■□□□ 1.07
PHF20-216ENST00000617560 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
PHF20-216ENST00000617560 STRCP1A6NGW2 1772 aa21.75■■□□□ 1.07
PHF20-216ENST00000617560 NPHP4O75161 1426 aaPredicted RBP21.74■■□□□ 1.07
PHF20-216ENST00000617560 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
PHF20-216ENST00000617560 PZPP20742 1482 aa21.73■■□□□ 1.07
PHF20-216ENST00000617560 KIF3BO15066 747 aa21.71■■□□□ 1.07
PHF20-216ENST00000617560 DHX29Q7Z478 1369 aaKnown RBP21.71■■□□□ 1.07
PHF20-216ENST00000617560 MED14O60244 1454 aa21.71■■□□□ 1.07
PHF20-216ENST00000617560 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
PHF20-216ENST00000617560 UGGT1Q9NYU2 1555 aa21.7■■□□□ 1.06
PHF20-216ENST00000617560 DEPDC5O75140 1603 aa21.7■■□□□ 1.06
PHF20-216ENST00000617560 IQGAP1P46940 1657 aa21.7■■□□□ 1.06
PHF20-216ENST00000617560 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
PHF20-216ENST00000617560 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
PHF20-216ENST00000617560 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
PHF20-216ENST00000617560 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
PHF20-216ENST00000617560 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
PHF20-216ENST00000617560 FAM135AQ9P2D6 1515 aa21.67■■□□□ 1.06
PHF20-216ENST00000617560 WASHC2CQ9Y4E1 1318 aa21.66■■□□□ 1.06
PHF20-216ENST00000617560 NLRP1Q9C000 1473 aa21.65■■□□□ 1.06
PHF20-216ENST00000617560 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
PHF20-216ENST00000617560 TIAM1Q13009 1591 aa21.65■■□□□ 1.06
PHF20-216ENST00000617560 MTUS2Q5JR59 1369 aa21.64■■□□□ 1.06
PHF20-216ENST00000617560 SYNMO15061 1565 aa21.62■■□□□ 1.05
PHF20-216ENST00000617560 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
PHF20-216ENST00000617560 ZC3H13Q5T200 1668 aaKnown RBP21.57■■□□□ 1.04
PHF20-216ENST00000617560 XIRP1Q702N8 1843 aaKnown RBP21.56■■□□□ 1.04
PHF20-216ENST00000617560 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
PHF20-216ENST00000617560 CCDC141Q6ZP82 1450 aa21.55■■□□□ 1.04
PHF20-216ENST00000617560 CFAP65Q6ZU64 1925 aaKnown RBP21.53■■□□□ 1.04
PHF20-216ENST00000617560 SETD1AO15047 1707 aaKnown RBP21.51■■□□□ 1.03
PHF20-216ENST00000617560 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
PHF20-216ENST00000617560 CAMSAP2Q08AD1 1489 aa21.5■■□□□ 1.03
PHF20-216ENST00000617560 ERVK-7P63135 1459 aa21.49■■□□□ 1.03
PHF20-216ENST00000617560 ABCC3O15438 1527 aa21.49■■□□□ 1.03
PHF20-216ENST00000617560 UBR1Q8IWV7 1749 aa21.49■■□□□ 1.03
PHF20-216ENST00000617560 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
PHF20-216ENST00000617560 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
PHF20-216ENST00000617560 LTKP29376 864 aa21.47■■□□□ 1.03
PHF20-216ENST00000617560 NCOA2Q15596 1464 aa21.45■■□□□ 1.03
PHF20-216ENST00000617560 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
PHF20-216ENST00000617560 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
PHF20-216ENST00000617560 CEP152O94986 1710 aa21.43■■□□□ 1.02
PHF20-216ENST00000617560 ROBO1Q9Y6N7 1651 aa21.41■■□□□ 1.02
PHF20-216ENST00000617560 RSPH4AQ5TD94 716 aa21.41■■□□□ 1.02
PHF20-216ENST00000617560 ARHGAP23Q9P227 1491 aa21.4■■□□□ 1.02
PHF20-216ENST00000617560 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
PHF20-216ENST00000617560 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
PHF20-216ENST00000617560 MROH1Q8NDA8 1641 aa21.4■■□□□ 1.02
PHF20-216ENST00000617560 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
PHF20-216ENST00000617560 ARHGEF5Q12774 1597 aa21.39■■□□□ 1.01
PHF20-216ENST00000617560 SLIT1O75093 1534 aa21.39■■□□□ 1.01
PHF20-216ENST00000617560 TMEM94Q12767 1356 aa21.38■■□□□ 1.01
PHF20-216ENST00000617560 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
PHF20-216ENST00000617560 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
PHF20-216ENST00000617560 EIF2AK4Q9P2K8 1649 aaKnown RBP21.33■■□□□ 1.01
PHF20-216ENST00000617560 PIK3C2BO00750 1634 aa21.31■■□□□ 1
PHF20-216ENST00000617560 PROSER2Q86WR7 435 aaPredicted RBP21.31■■□□□ 1
PHF20-216ENST00000617560 MAST1Q9Y2H9 1570 aa21.3■■□□□ 1
PHF20-216ENST00000617560 PHLPP1O60346 1717 aa21.29■■□□□ 1
PHF20-216ENST00000617560 TMEM2Q9UHN6 1383 aa21.29■■□□□ 1
PHF20-216ENST00000617560 KCNA6P17658 529 aa21.28■■□□□ 1
PHF20-216ENST00000617560 SLC26A8Q96RN1 970 aa21.28■■□□□ 1
PHF20-216ENST00000617560 UPF1Q92900 1129 aaKnown RBP eCLIP21.27■■□□□ 1
PHF20-216ENST00000617560 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
PHF20-216ENST00000617560 STAG3Q9UJ98 1225 aa21.25■□□□□ 0.99
PHF20-216ENST00000617560 JCADQ9P266 1359 aa21.24■□□□□ 0.99
PHF20-216ENST00000617560 PRDM15P57071 1507 aaPredicted RBP21.24■□□□□ 0.99
PHF20-216ENST00000617560 ARHGAP31Q2M1Z3 1444 aa21.23■□□□□ 0.99
PHF20-216ENST00000617560 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
PHF20-216ENST00000617560 TET3O43151 1660 aa21.23■□□□□ 0.99
PHF20-216ENST00000617560 SLAIN2Q9P270 581 aa21.22■□□□□ 0.99
PHF20-216ENST00000617560 LRP6O75581 1613 aa21.22■□□□□ 0.99
PHF20-216ENST00000617560 EFCAB6Q5THR3 1501 aa21.21■□□□□ 0.99
PHF20-216ENST00000617560 DUOX2Q9NRD8 1548 aa21.21■□□□□ 0.99
PHF20-216ENST00000617560 MSH6P52701 1360 aa21.21■□□□□ 0.99
PHF20-216ENST00000617560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.98
PHF20-216ENST00000617560 COL16A1Q07092 1604 aaPredicted RBP21.19■□□□□ 0.98
PHF20-216ENST00000617560 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
PHF20-216ENST00000617560 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
PHF20-216ENST00000617560 IDI1Q13907 227 aa21.18■□□□□ 0.98
PHF20-216ENST00000617560 MEX3CQ5U5Q3 659 aaKnown RBP21.17■□□□□ 0.98
PHF20-216ENST00000617560 SRCAPQ6ZRS2 3230 aa21.16■□□□□ 0.98
PHF20-216ENST00000617560 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
PHF20-216ENST00000617560 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
PHF20-216ENST00000617560 BCANQ96GW7 911 aa21.15■□□□□ 0.98
PHF20-216ENST00000617560 ZNF772Q68DY9 489 aaPredicted RBP21.13■□□□□ 0.97
PHF20-216ENST00000617560 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
PHF20-216ENST00000617560 SPATA31A6Q5VVP1 1343 aa21.11■□□□□ 0.97
PHF20-216ENST00000617560 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
PHF20-216ENST00000617560 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
PHF20-216ENST00000617560 ADGRB3O60242 1522 aa21.09■□□□□ 0.97
PHF20-216ENST00000617560 CHD2O14647 1828 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms