RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GPRASP1Q5JY77 1395 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 TCEAL9Q9UHQ7 104 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 ITSN1Q15811 1721 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 WWC1Q8IX03 1113 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 C11orf95C9JLR9 678 aaPredicted RBP4.38□□□□□ -1.71
LPP-220ENST00000617246 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.38□□□□□ -1.71
LPP-220ENST00000617246 LMTK3Q96Q04 1460 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 PEG3Q9GZU2 1588 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 PDE3BQ13370 1112 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 PHLDB1Q86UU1 1377 aa4.37□□□□□ -1.71
LPP-220ENST00000617246 AIDAQ96BJ3 306 aa4.37□□□□□ -1.71
LPP-220ENST00000617246 RRBP1Q9P2E9 1410 aaKnown RBP4.37□□□□□ -1.71
LPP-220ENST00000617246 CENPBP07199 599 aaPredicted RBP4.37□□□□□ -1.71
LPP-220ENST00000617246 CHMP4BQ9H444 224 aaKnown RBP4.37□□□□□ -1.71
LPP-220ENST00000617246 THEMISQ8N1K5 641 aaPredicted RBP4.37□□□□□ -1.71
LPP-220ENST00000617246 NUDCQ9Y266 331 aa4.37□□□□□ -1.71
LPP-220ENST00000617246 UBAP1LF5GYI3 381 aa4.37□□□□□ -1.71
LPP-220ENST00000617246 CCDC141Q6ZP82 1450 aa4.37□□□□□ -1.71
LPP-220ENST00000617246 ADGRL1O94910 1474 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 GRIN2AQ12879 1464 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 ANKRD30AQ9BXX3 1397 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 DENND4BO75064 1496 aaPredicted RBP4.36□□□□□ -1.71
LPP-220ENST00000617246 HDAC5Q9UQL6 1122 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 NGDNQ8NEJ9 315 aaKnown RBP4.36□□□□□ -1.71
LPP-220ENST00000617246 PRKCSHP14314 528 aaPredicted RBP4.36□□□□□ -1.71
LPP-220ENST00000617246 BAG6P46379 1132 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 PRG4Q92954 1404 aaPredicted RBP4.36□□□□□ -1.71
LPP-220ENST00000617246 PPP6R1Q9UPN7 881 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 RAB3GAP2Q9H2M9 1393 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 LRRC9Q6ZRR7 1453 aa4.36□□□□□ -1.71
LPP-220ENST00000617246 RTF1Q92541 710 aaKnown RBP4.36□□□□□ -1.71
LPP-220ENST00000617246 SPDYE4A6NLX3 237 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 WWC2Q6AWC2 1192 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 ADGRB2O60241 1585 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 DDRGK1Q96HY6 314 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 PCGF6Q9BYE7 350 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 SYNMO15061 1565 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 ABCA10Q8WWZ4 1543 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 PTPRKQ15262 1439 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 PPP4R2Q9NY27 417 aa4.35□□□□□ -1.71
LPP-220ENST00000617246 ZNF518AQ6AHZ1 1483 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 CARMIL1Q5VZK9 1371 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 ABCA6Q8N139 1617 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 TAF7LQ5H9L4 462 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 ANKLE2Q86XL3 938 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 TTC5Q8N0Z6 440 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 CNGB1Q14028 1251 aaPredicted RBP4.34□□□□□ -1.71
LPP-220ENST00000617246 CLTCQ00610 1675 aaKnown RBP4.34□□□□□ -1.71
LPP-220ENST00000617246 NCBP3Q53F19 620 aaKnown RBP4.34□□□□□ -1.71
LPP-220ENST00000617246 TMC1Q8TDI8 760 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 ZRANB1Q9UGI0 708 aa4.34□□□□□ -1.71
LPP-220ENST00000617246 C1orf141Q5JVX7 400 aa4.34□□□□□ -1.72
LPP-220ENST00000617246 FRAT2O75474 233 aaPredicted RBP4.34□□□□□ -1.72
LPP-220ENST00000617246 PRM3Q9NNZ6 103 aa4.34□□□□□ -1.72
LPP-220ENST00000617246 RFX1P22670 979 aa4.33□□□□□ -1.72
LPP-220ENST00000617246 EIF2AK4Q9P2K8 1649 aaKnown RBP4.33□□□□□ -1.72
LPP-220ENST00000617246 NF2P35240 595 aa4.33□□□□□ -1.72
LPP-220ENST00000617246 KDM5AP29375 1690 aaKnown RBP4.33□□□□□ -1.72
LPP-220ENST00000617246 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
LPP-220ENST00000617246 HNRNPMP52272 730 aaKnown RBP eCLIP4.33□□□□□ -1.721e-6■■■□□ 19.2
LPP-220ENST00000617246 CD109Q6YHK3 1445 aa4.33□□□□□ -1.72
LPP-220ENST00000617246 ADCY10Q96PN6 1610 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 ZNF330Q9Y3S2 320 aaPredicted RBP4.32□□□□□ -1.72
LPP-220ENST00000617246 ARHGEF6Q15052 776 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 RBM27Q9P2N5 1060 aaKnown RBP4.32□□□□□ -1.72
LPP-220ENST00000617246 RUSC2Q8N2Y8 1516 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 TMEM87AQ8NBN3 555 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 ZNF772Q68DY9 489 aaPredicted RBP4.32□□□□□ -1.72
LPP-220ENST00000617246 UPF2Q9HAU5 1272 aaKnown RBP4.32□□□□□ -1.72
LPP-220ENST00000617246 TDRD9Q8NDG6 1382 aaKnown RBP4.32□□□□□ -1.72
LPP-220ENST00000617246 SMC4Q9NTJ3 1288 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 ARHGEF11O15085 1522 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 C9orf84Q5VXU9 1444 aa4.32□□□□□ -1.72
LPP-220ENST00000617246 MYOM3Q5VTT5 1437 aa4.31□□□□□ -1.72
LPP-220ENST00000617246 CASC1Q6TDU7 716 aa4.31□□□□□ -1.72
LPP-220ENST00000617246 FBXW7Q969H0 707 aa4.31□□□□□ -1.72
LPP-220ENST00000617246 PPRC1Q5VV67 1664 aaKnown RBP4.31□□□□□ -1.72
LPP-220ENST00000617246 ZNF608Q9ULD9 1512 aaPredicted RBP4.31□□□□□ -1.72
LPP-220ENST00000617246 SYTL4Q96C24 671 aaPredicted RBP4.31□□□□□ -1.72
LPP-220ENST00000617246 MPHOSPH6Q99547 160 aaKnown RBP4.31□□□□□ -1.72
LPP-220ENST00000617246 LAMC1P11047 1609 aa4.31□□□□□ -1.72
LPP-220ENST00000617246 POLA1P09884 1462 aaPredicted RBP4.31□□□□□ -1.72
LPP-220ENST00000617246 CDC42BPGQ6DT37 1551 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 ZRSR1Q15695 479 aaKnown RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 TRIM21P19474 475 aaKnown RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 AK9Q5TCS8 1911 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 LMOD1P29536 600 aaPredicted RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 CCDC144AA2RUR9 1427 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 PROSER2Q86WR7 435 aaPredicted RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 KCNJ4P48050 445 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 OS9Q13438 667 aaPredicted RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 BCL11AQ9H165 835 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 HSP90AA1P07900 732 aaKnown RBP4.3□□□□□ -1.72
LPP-220ENST00000617246 NSD3Q9BZ95 1437 aa4.3□□□□□ -1.72
LPP-220ENST00000617246 ABCC2Q92887 1545 aa4.29□□□□□ -1.72
LPP-220ENST00000617246 CFTRP13569 1480 aa4.29□□□□□ -1.72
LPP-220ENST00000617246 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
LPP-220ENST00000617246 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.29□□□□□ -1.72
LPP-220ENST00000617246 PREX2Q70Z35 1606 aa4.29□□□□□ -1.72
LPP-220ENST00000617246 CEP152O94986 1710 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms