RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 FOXD1Q16676 465 aa23.21■■□□□ 1.31
DDB2-212ENST00000617022 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
DDB2-212ENST00000617022 KDM5DQ9BY66 1539 aa23.21■■□□□ 1.31
DDB2-212ENST00000617022 COL17A1Q9UMD9 1497 aaPredicted RBP23.2■■□□□ 1.3
DDB2-212ENST00000617022 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
DDB2-212ENST00000617022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.2■■□□□ 1.33e-7■■■□□ 18.8
DDB2-212ENST00000617022 A2MP01023 1474 aa23.19■■□□□ 1.3
DDB2-212ENST00000617022 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
DDB2-212ENST00000617022 YEATS2Q9ULM3 1422 aa23.18■■□□□ 1.3
DDB2-212ENST00000617022 DIP2CQ9Y2E4 1556 aa23.17■■□□□ 1.3
DDB2-212ENST00000617022 FAM135AQ9P2D6 1515 aa23.16■■□□□ 1.3
DDB2-212ENST00000617022 KIF3BO15066 747 aa23.16■■□□□ 1.3
DDB2-212ENST00000617022 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
DDB2-212ENST00000617022 EIF2AK4Q9P2K8 1649 aaKnown RBP23.14■■□□□ 1.3
DDB2-212ENST00000617022 PKD2Q13563 968 aa23.14■■□□□ 1.29
DDB2-212ENST00000617022 DEPDC5O75140 1603 aa23.12■■□□□ 1.29
DDB2-212ENST00000617022 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
DDB2-212ENST00000617022 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
DDB2-212ENST00000617022 MROH1Q8NDA8 1641 aa23.07■■□□□ 1.28
DDB2-212ENST00000617022 PRDM15P57071 1507 aaPredicted RBP23.05■■□□□ 1.28
DDB2-212ENST00000617022 ATP10AO60312 1499 aa23.04■■□□□ 1.28
DDB2-212ENST00000617022 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
DDB2-212ENST00000617022 KANK1Q14678 1352 aa23.03■■□□□ 1.28
DDB2-212ENST00000617022 GGT6Q6P531 493 aa23.03■■□□□ 1.28
DDB2-212ENST00000617022 BCORL1Q5H9F3 1711 aa23.02■■□□□ 1.28
DDB2-212ENST00000617022 VWDEQ8N2E2 1590 aa23.02■■□□□ 1.28
DDB2-212ENST00000617022 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
DDB2-212ENST00000617022 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
DDB2-212ENST00000617022 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
DDB2-212ENST00000617022 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
DDB2-212ENST00000617022 TET3O43151 1660 aa22.96■■□□□ 1.27
DDB2-212ENST00000617022 DIEXFQ68CQ4 756 aaKnown RBP22.96■■□□□ 1.27
DDB2-212ENST00000617022 E9PCH4 1651 aa22.95■■□□□ 1.27
DDB2-212ENST00000617022 CEP152O94986 1710 aa22.95■■□□□ 1.26
DDB2-212ENST00000617022 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
DDB2-212ENST00000617022 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
DDB2-212ENST00000617022 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
DDB2-212ENST00000617022 LMTK2Q8IWU2 1503 aa22.91■■□□□ 1.26
DDB2-212ENST00000617022 AGLP35573 1532 aa22.91■■□□□ 1.26
DDB2-212ENST00000617022 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
DDB2-212ENST00000617022 EFCAB6Q5THR3 1501 aa22.9■■□□□ 1.26
DDB2-212ENST00000617022 ABCC3O15438 1527 aa22.9■■□□□ 1.26
DDB2-212ENST00000617022 CCDC144AA2RUR9 1427 aa22.87■■□□□ 1.25
DDB2-212ENST00000617022 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
DDB2-212ENST00000617022 L3MBTL2Q969R5 705 aa22.86■■□□□ 1.25
DDB2-212ENST00000617022 MLECQ14165 292 aa22.85■■□□□ 1.25
DDB2-212ENST00000617022 SPHKAPQ2M3C7 1700 aa22.84■■□□□ 1.25
DDB2-212ENST00000617022 CAMSAP1Q5T5Y3 1602 aa22.84■■□□□ 1.25
DDB2-212ENST00000617022 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.25
DDB2-212ENST00000617022 PTPRTO14522 1441 aa22.83■■□□□ 1.24
DDB2-212ENST00000617022 NPATQ14207 1427 aa22.83■■□□□ 1.24
DDB2-212ENST00000617022 TRPM2O94759 1503 aa22.82■■□□□ 1.24
DDB2-212ENST00000617022 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
DDB2-212ENST00000617022 CLTCL1P53675 1640 aa22.77■■□□□ 1.24
DDB2-212ENST00000617022 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
DDB2-212ENST00000617022 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
DDB2-212ENST00000617022 PPP6R1Q9UPN7 881 aa22.75■■□□□ 1.23
DDB2-212ENST00000617022 CLTCQ00610 1675 aaKnown RBP22.75■■□□□ 1.23
DDB2-212ENST00000617022 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
DDB2-212ENST00000617022 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
DDB2-212ENST00000617022 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
DDB2-212ENST00000617022 NOS1P29475 1434 aa22.7■■□□□ 1.22
DDB2-212ENST00000617022 NBPF8Q3BBV2 869 aa22.69■■□□□ 1.22
DDB2-212ENST00000617022 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
DDB2-212ENST00000617022 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
DDB2-212ENST00000617022 SPATA31E1Q6ZUB1 1445 aa22.68■■□□□ 1.22
DDB2-212ENST00000617022 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
DDB2-212ENST00000617022 SYNMO15061 1565 aa22.67■■□□□ 1.22
DDB2-212ENST00000617022 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
DDB2-212ENST00000617022 PREX1Q8TCU6 1659 aa22.66■■□□□ 1.22
DDB2-212ENST00000617022 FBXO31Q5XUX0 539 aaPredicted RBP22.66■■□□□ 1.22
DDB2-212ENST00000617022 ZNF316A6NFI3 1004 aaPredicted RBP22.64■■□□□ 1.21
DDB2-212ENST00000617022 KIF1BO60333 1816 aa22.63■■□□□ 1.21
DDB2-212ENST00000617022 ERVK-7P63135 1459 aa22.63■■□□□ 1.21
DDB2-212ENST00000617022 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
DDB2-212ENST00000617022 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
DDB2-212ENST00000617022 PIK3C2BO00750 1634 aa22.61■■□□□ 1.21
DDB2-212ENST00000617022 MROH2AA6NES4 1674 aa22.61■■□□□ 1.21
DDB2-212ENST00000617022 UHRF1BP1Q6BDS2 1440 aa22.6■■□□□ 1.21
DDB2-212ENST00000617022 NEURL4Q96JN8 1562 aa22.58■■□□□ 1.21
DDB2-212ENST00000617022 ADGRB3O60242 1522 aa22.58■■□□□ 1.21
DDB2-212ENST00000617022 IDI1Q13907 227 aa22.57■■□□□ 1.2
DDB2-212ENST00000617022 SPATA31D1Q6ZQQ2 1576 aa22.56■■□□□ 1.2
DDB2-212ENST00000617022 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
DDB2-212ENST00000617022 FER1L4A9Z1Z3 1794 aa22.56■■□□□ 1.2
DDB2-212ENST00000617022 PRAG1Q86YV5 1406 aa22.55■■□□□ 1.2
DDB2-212ENST00000617022 HIRIP3Q9BW71 556 aaPredicted RBP22.53■■□□□ 1.2
DDB2-212ENST00000617022 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
DDB2-212ENST00000617022 CEBPAP49715 358 aaPredicted RBP22.51■■□□□ 1.19
DDB2-212ENST00000617022 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
DDB2-212ENST00000617022 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
DDB2-212ENST00000617022 TRPM1Q7Z4N2 1603 aa22.48■■□□□ 1.19
DDB2-212ENST00000617022 MADDQ8WXG6 1647 aa22.48■■□□□ 1.19
DDB2-212ENST00000617022 C3P01024 1663 aa22.48■■□□□ 1.19
DDB2-212ENST00000617022 TMEM131LA2VDJ0 1609 aa22.47■■□□□ 1.19
DDB2-212ENST00000617022 MYO5BQ9ULV0 1848 aa22.46■■□□□ 1.19
DDB2-212ENST00000617022 TNRQ92752 1358 aa22.46■■□□□ 1.19
DDB2-212ENST00000617022 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
DDB2-212ENST00000617022 MYOM2P54296 1465 aa22.45■■□□□ 1.18
DDB2-212ENST00000617022 HSPA5P11021 654 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms