RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 SYNMO15061 1565 aa17.91■□□□□ 0.46
AP003900.1-202ENST00000616952 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
AP003900.1-202ENST00000616952 ARHGAP5Q13017 1502 aa17.89■□□□□ 0.45
AP003900.1-202ENST00000616952 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
AP003900.1-202ENST00000616952 POLA2Q14181 598 aa17.85■□□□□ 0.45
AP003900.1-202ENST00000616952 KIDINS220Q9ULH0 1771 aa17.84■□□□□ 0.45
AP003900.1-202ENST00000616952 ZBTB22O15209 634 aa17.83■□□□□ 0.44
AP003900.1-202ENST00000616952 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
AP003900.1-202ENST00000616952 NPHP4O75161 1426 aaPredicted RBP17.82■□□□□ 0.44
AP003900.1-202ENST00000616952 MED14O60244 1454 aa17.82■□□□□ 0.44
AP003900.1-202ENST00000616952 ABCC1P33527 1531 aa17.8■□□□□ 0.44
AP003900.1-202ENST00000616952 KIF14Q15058 1648 aa17.8■□□□□ 0.44
AP003900.1-202ENST00000616952 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
AP003900.1-202ENST00000616952 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
AP003900.1-202ENST00000616952 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
AP003900.1-202ENST00000616952 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
AP003900.1-202ENST00000616952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.43
AP003900.1-202ENST00000616952 IQGAP1P46940 1657 aa17.77■□□□□ 0.43
AP003900.1-202ENST00000616952 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
AP003900.1-202ENST00000616952 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
AP003900.1-202ENST00000616952 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
AP003900.1-202ENST00000616952 TNRQ92752 1358 aa17.71■□□□□ 0.43
AP003900.1-202ENST00000616952 ROBO1Q9Y6N7 1651 aa17.69■□□□□ 0.42
AP003900.1-202ENST00000616952 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
AP003900.1-202ENST00000616952 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
AP003900.1-202ENST00000616952 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
AP003900.1-202ENST00000616952 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
AP003900.1-202ENST00000616952 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
AP003900.1-202ENST00000616952 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
AP003900.1-202ENST00000616952 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
AP003900.1-202ENST00000616952 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
AP003900.1-202ENST00000616952 GGT6Q6P531 493 aa17.66■□□□□ 0.42
AP003900.1-202ENST00000616952 THEMISQ8N1K5 641 aaPredicted RBP17.66■□□□□ 0.42
AP003900.1-202ENST00000616952 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
AP003900.1-202ENST00000616952 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
AP003900.1-202ENST00000616952 JCADQ9P266 1359 aa17.66■□□□□ 0.42
AP003900.1-202ENST00000616952 LRP6O75581 1613 aa17.65■□□□□ 0.42
AP003900.1-202ENST00000616952 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
AP003900.1-202ENST00000616952 XIRP1Q702N8 1843 aaKnown RBP17.65■□□□□ 0.42
AP003900.1-202ENST00000616952 A2MP01023 1474 aa17.64■□□□□ 0.41
AP003900.1-202ENST00000616952 CLIP1P30622 1438 aa17.63■□□□□ 0.41
AP003900.1-202ENST00000616952 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
AP003900.1-202ENST00000616952 RXRBP28702 533 aa17.62■□□□□ 0.41
AP003900.1-202ENST00000616952 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
AP003900.1-202ENST00000616952 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
AP003900.1-202ENST00000616952 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
AP003900.1-202ENST00000616952 ZC3H13Q5T200 1668 aaKnown RBP17.61■□□□□ 0.41
AP003900.1-202ENST00000616952 ZRANB1Q9UGI0 708 aa17.61■□□□□ 0.41
AP003900.1-202ENST00000616952 PZPP20742 1482 aa17.61■□□□□ 0.41
AP003900.1-202ENST00000616952 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
AP003900.1-202ENST00000616952 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
AP003900.1-202ENST00000616952 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
AP003900.1-202ENST00000616952 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
AP003900.1-202ENST00000616952 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
AP003900.1-202ENST00000616952 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
AP003900.1-202ENST00000616952 INO80Q9ULG1 1556 aaPredicted RBP17.58■□□□□ 0.41
AP003900.1-202ENST00000616952 PHLPP1O60346 1717 aa17.58■□□□□ 0.4
AP003900.1-202ENST00000616952 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
AP003900.1-202ENST00000616952 RGS12O14924 1447 aa17.55■□□□□ 0.4
AP003900.1-202ENST00000616952 SPATA31A6Q5VVP1 1343 aa17.55■□□□□ 0.4
AP003900.1-202ENST00000616952 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
AP003900.1-202ENST00000616952 POTEHQ6S545 545 aa17.54■□□□□ 0.4
AP003900.1-202ENST00000616952 COL16A1Q07092 1604 aaPredicted RBP17.53■□□□□ 0.4
AP003900.1-202ENST00000616952 TMEM94Q12767 1356 aa17.53■□□□□ 0.4
AP003900.1-202ENST00000616952 MAP3K1Q13233 1512 aa17.52■□□□□ 0.4
AP003900.1-202ENST00000616952 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
AP003900.1-202ENST00000616952 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
AP003900.1-202ENST00000616952 FGD6Q6ZV73 1430 aa17.5■□□□□ 0.39
AP003900.1-202ENST00000616952 SCAF11Q99590 1463 aaKnown RBP17.49■□□□□ 0.39
AP003900.1-202ENST00000616952 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
AP003900.1-202ENST00000616952 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
AP003900.1-202ENST00000616952 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
AP003900.1-202ENST00000616952 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
AP003900.1-202ENST00000616952 LRP5O75197 1615 aa17.43■□□□□ 0.38
AP003900.1-202ENST00000616952 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
AP003900.1-202ENST00000616952 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
AP003900.1-202ENST00000616952 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.387e-10■■■■□ 23.8
AP003900.1-202ENST00000616952 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
AP003900.1-202ENST00000616952 EP400Q96L91 3159 aa17.41■□□□□ 0.38
AP003900.1-202ENST00000616952 AFF2P51816 1311 aa17.41■□□□□ 0.38
AP003900.1-202ENST00000616952 KIAA1107Q9UPP5 1409 aa17.39■□□□□ 0.38
AP003900.1-202ENST00000616952 SLAIN2Q9P270 581 aa17.39■□□□□ 0.37
AP003900.1-202ENST00000616952 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
AP003900.1-202ENST00000616952 RBM6P78332 1123 aaKnown RBP17.38■□□□□ 0.37
AP003900.1-202ENST00000616952 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
AP003900.1-202ENST00000616952 MSH6P52701 1360 aa17.38■□□□□ 0.37
AP003900.1-202ENST00000616952 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
AP003900.1-202ENST00000616952 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
AP003900.1-202ENST00000616952 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
AP003900.1-202ENST00000616952 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
AP003900.1-202ENST00000616952 SLIT1O75093 1534 aa17.37■□□□□ 0.37
AP003900.1-202ENST00000616952 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
AP003900.1-202ENST00000616952 LTKP29376 864 aa17.35■□□□□ 0.37
AP003900.1-202ENST00000616952 NKTRP30414 1462 aaKnown RBP17.35■□□□□ 0.37
AP003900.1-202ENST00000616952 ABCC3O15438 1527 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms