RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 DUOX2Q9NRD8 1548 aa34.17■■■■□ 3.06
CBWD3-212ENST00000616550 RRP7BPQ9NSQ0 103 aa34.17■■■■□ 3.06
CBWD3-212ENST00000616550 WASHC2CQ9Y4E1 1318 aa34.17■■■■□ 3.06
CBWD3-212ENST00000616550 KIF15Q9NS87 1388 aa34.15■■■■□ 3.06
CBWD3-212ENST00000616550 CHIC2Q9UKJ5 165 aa34.15■■■■□ 3.06
CBWD3-212ENST00000616550 EIF2AK4Q9P2K8 1649 aaKnown RBP34.14■■■■□ 3.06
CBWD3-212ENST00000616550 FAM135AQ9P2D6 1515 aa34.14■■■■□ 3.06
CBWD3-212ENST00000616550 KDM5DQ9BY66 1539 aa34.12■■■■□ 3.05
CBWD3-212ENST00000616550 ANKRD30AQ9BXX3 1397 aa34.11■■■■□ 3.05
CBWD3-212ENST00000616550 RNF17Q9BXT8 1623 aaKnown RBP34.1■■■■□ 3.05
CBWD3-212ENST00000616550 PTPRKQ15262 1439 aa34.1■■■■□ 3.05
CBWD3-212ENST00000616550 ERBINQ96RT1 1412 aa34.05■■■■□ 3.04
CBWD3-212ENST00000616550 NCOA1Q15788 1441 aa34.04■■■■□ 3.04
CBWD3-212ENST00000616550 FBXO31Q5XUX0 539 aaPredicted RBP33.99■■■■□ 3.03
CBWD3-212ENST00000616550 ADGRL2O95490 1459 aa33.99■■■■□ 3.03
CBWD3-212ENST00000616550 PZPP20742 1482 aa33.99■■■■□ 3.03
CBWD3-212ENST00000616550 ZC3H13Q5T200 1668 aaKnown RBP33.98■■■■□ 3.03
CBWD3-212ENST00000616550 ABCC3O15438 1527 aa33.97■■■■□ 3.03
CBWD3-212ENST00000616550 MROH1Q8NDA8 1641 aa33.97■■■■□ 3.03
CBWD3-212ENST00000616550 MYO3AQ8NEV4 1616 aa33.96■■■■□ 3.03
CBWD3-212ENST00000616550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.94■■■■□ 3.02
CBWD3-212ENST00000616550 DMRT2Q9Y5R5 561 aa33.94■■■■□ 3.02
CBWD3-212ENST00000616550 TNRQ92752 1358 aa33.93■■■■□ 3.02
CBWD3-212ENST00000616550 STRCQ7RTU9 1775 aa33.93■■■■□ 3.02
CBWD3-212ENST00000616550 CEP152O94986 1710 aa33.9■■■■□ 3.02
CBWD3-212ENST00000616550 ZNF142P52746 1687 aaPredicted RBP33.9■■■■□ 3.02
CBWD3-212ENST00000616550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.9■■■■□ 3.02
CBWD3-212ENST00000616550 CEP170BQ9Y4F5 1589 aaPredicted RBP33.89■■■■□ 3.02
CBWD3-212ENST00000616550 PRDM15P57071 1507 aaPredicted RBP33.89■■■■□ 3.02
CBWD3-212ENST00000616550 KANK1Q14678 1352 aa33.89■■■■□ 3.02
CBWD3-212ENST00000616550 DEPDC5O75140 1603 aa33.87■■■■□ 3.01
CBWD3-212ENST00000616550 ITGAEP38570 1179 aa33.87■■■■□ 3.01
CBWD3-212ENST00000616550 CAMSAP1Q5T5Y3 1602 aa33.86■■■■□ 3.01
CBWD3-212ENST00000616550 A2ML1A8K2U0 1454 aa33.85■■■■□ 3.01
CBWD3-212ENST00000616550 ANKRD50Q9ULJ7 1429 aa33.85■■■■□ 3.01
CBWD3-212ENST00000616550 CFAP65Q6ZU64 1925 aaKnown RBP33.83■■■■□ 3.01
CBWD3-212ENST00000616550 ROCK1Q13464 1354 aa33.82■■■■□ 3
CBWD3-212ENST00000616550 NLRP1Q9C000 1473 aa33.78■■■■□ 3
CBWD3-212ENST00000616550 PTPRTO14522 1441 aa33.78■■■■□ 3
CBWD3-212ENST00000616550 SPATA31D1Q6ZQQ2 1576 aa33.77■■■■□ 3
CBWD3-212ENST00000616550 ERVK-7P63135 1459 aa33.77■■■■□ 3
CBWD3-212ENST00000616550 ARHGAP31Q2M1Z3 1444 aa33.77■■■■□ 3
CBWD3-212ENST00000616550 RRBP1Q9P2E9 1410 aaKnown RBP33.77■■■■□ 3
CBWD3-212ENST00000616550 PLA2R1Q13018 1463 aa33.76■■■■□ 3
CBWD3-212ENST00000616550 NCKAP5LQ9HCH0 1330 aa33.76■■■□□ 2.99
CBWD3-212ENST00000616550 PKD2Q13563 968 aa33.75■■■□□ 2.99
CBWD3-212ENST00000616550 VWDEQ8N2E2 1590 aa33.73■■■□□ 2.99
CBWD3-212ENST00000616550 THEMISQ8N1K5 641 aaPredicted RBP33.72■■■□□ 2.99
CBWD3-212ENST00000616550 LMTK2Q8IWU2 1503 aa33.72■■■□□ 2.99
CBWD3-212ENST00000616550 UGGT1Q9NYU2 1555 aa33.68■■■□□ 2.98
CBWD3-212ENST00000616550 ILDR1Q86SU0 546 aaPredicted RBP33.68■■■□□ 2.98
CBWD3-212ENST00000616550 ANKLE2Q86XL3 938 aa33.61■■■□□ 2.97
CBWD3-212ENST00000616550 CERKQ8TCT0 537 aa33.61■■■□□ 2.97
CBWD3-212ENST00000616550 EFCAB6Q5THR3 1501 aa33.61■■■□□ 2.97
CBWD3-212ENST00000616550 UNC13BO14795 1591 aa33.6■■■□□ 2.97
CBWD3-212ENST00000616550 FBXO41Q8TF61 875 aa33.57■■■□□ 2.96
CBWD3-212ENST00000616550 POLR1AO95602 1720 aaPredicted RBP33.56■■■□□ 2.96
CBWD3-212ENST00000616550 TET3O43151 1660 aa33.55■■■□□ 2.96
CBWD3-212ENST00000616550 UBR1Q8IWV7 1749 aa33.53■■■□□ 2.96
CBWD3-212ENST00000616550 RPRD2Q5VT52 1461 aaKnown RBP33.53■■■□□ 2.96
CBWD3-212ENST00000616550 NUP155O75694 1391 aa33.52■■■□□ 2.96
CBWD3-212ENST00000616550 STAG3Q9UJ98 1225 aa33.52■■■□□ 2.96
CBWD3-212ENST00000616550 NOS1P29475 1434 aa33.51■■■□□ 2.95
CBWD3-212ENST00000616550 GCC2Q8IWJ2 1684 aa33.51■■■□□ 2.95
CBWD3-212ENST00000616550 IDI1Q13907 227 aa33.5■■■□□ 2.95
CBWD3-212ENST00000616550 IQGAP3Q86VI3 1631 aa33.49■■■□□ 2.95
CBWD3-212ENST00000616550 NEURL4Q96JN8 1562 aa33.48■■■□□ 2.95
CBWD3-212ENST00000616550 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
CBWD3-212ENST00000616550 SLC52A1Q9NWF4 448 aa33.47■■■□□ 2.95
CBWD3-212ENST00000616550 SYNMO15061 1565 aa33.47■■■□□ 2.95
CBWD3-212ENST00000616550 ZNF335Q9H4Z2 1342 aaPredicted RBP33.45■■■□□ 2.95
CBWD3-212ENST00000616550 NAIPQ13075 1403 aa33.45■■■□□ 2.94
CBWD3-212ENST00000616550 LTBP4Q8N2S1 1624 aa33.44■■■□□ 2.94
CBWD3-212ENST00000616550 NPHP4O75161 1426 aaPredicted RBP33.43■■■□□ 2.94
CBWD3-212ENST00000616550 MED14O60244 1454 aa33.43■■■□□ 2.94
CBWD3-212ENST00000616550 E9PCH4 1651 aa33.41■■■□□ 2.94
CBWD3-212ENST00000616550 KDM5AP29375 1690 aaKnown RBP33.4■■■□□ 2.94
CBWD3-212ENST00000616550 TXNDC2Q86VQ3 553 aa33.4■■■□□ 2.94
CBWD3-212ENST00000616550 EID1Q9Y6B2 187 aa33.4■■■□□ 2.94
CBWD3-212ENST00000616550 SLIT1O75093 1534 aa33.38■■■□□ 2.93
CBWD3-212ENST00000616550 ARHGAP23Q9P227 1491 aa33.38■■■□□ 2.93
CBWD3-212ENST00000616550 HFM1A2PYH4 1435 aa33.38■■■□□ 2.93
CBWD3-212ENST00000616550 SCAF11Q99590 1463 aaKnown RBP33.37■■■□□ 2.93
CBWD3-212ENST00000616550 IQGAP1P46940 1657 aa33.36■■■□□ 2.93
CBWD3-212ENST00000616550 TMEM2Q9UHN6 1383 aa33.35■■■□□ 2.93
CBWD3-212ENST00000616550 LTKP29376 864 aa33.35■■■□□ 2.93
CBWD3-212ENST00000616550 ADGRB3O60242 1522 aa33.32■■■□□ 2.92
CBWD3-212ENST00000616550 TRIM52Q96A61 297 aa33.3■■■□□ 2.92
CBWD3-212ENST00000616550 IQSEC2Q5JU85 1478 aa33.28■■■□□ 2.92
CBWD3-212ENST00000616550 CHGAP10645 457 aaKnown RBP33.26■■■□□ 2.91
CBWD3-212ENST00000616550 MYO5BQ9ULV0 1848 aa33.23■■■□□ 2.91
CBWD3-212ENST00000616550 HDGFP51858 240 aaKnown RBP33.22■■■□□ 2.91
CBWD3-212ENST00000616550 CPS1P31327 1500 aa33.22■■■□□ 2.91
CBWD3-212ENST00000616550 TMEM131LA2VDJ0 1609 aa33.21■■■□□ 2.91
CBWD3-212ENST00000616550 SPHKAPQ2M3C7 1700 aa33.19■■■□□ 2.9
CBWD3-212ENST00000616550 SLC4A1APQ9BWU0 796 aaKnown RBP33.16■■■□□ 2.9
CBWD3-212ENST00000616550 BCANQ96GW7 911 aa33.15■■■□□ 2.9
CBWD3-212ENST00000616550 RIMS2Q9UQ26 1411 aa33.15■■■□□ 2.9
CBWD3-212ENST00000616550 PPP1R15AO75807 674 aaPredicted RBP33.14■■■□□ 2.9
CBWD3-212ENST00000616550 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms