RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
TARDBP-217ENST00000616545 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.34
TARDBP-217ENST00000616545 UNC13BO14795 1591 aa17.2■□□□□ 0.34
TARDBP-217ENST00000616545 KANK1Q14678 1352 aa17.2■□□□□ 0.34
TARDBP-217ENST00000616545 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
TARDBP-217ENST00000616545 NUP155O75694 1391 aa17.18■□□□□ 0.34
TARDBP-217ENST00000616545 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
TARDBP-217ENST00000616545 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
TARDBP-217ENST00000616545 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
TARDBP-217ENST00000616545 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
TARDBP-217ENST00000616545 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
TARDBP-217ENST00000616545 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
TARDBP-217ENST00000616545 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
TARDBP-217ENST00000616545 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
TARDBP-217ENST00000616545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.332e-9■■□□□ 13.4
TARDBP-217ENST00000616545 IQGAP3Q86VI3 1631 aa17.13■□□□□ 0.33
TARDBP-217ENST00000616545 GGT6Q6P531 493 aa17.12■□□□□ 0.33
TARDBP-217ENST00000616545 PZPP20742 1482 aa17.12■□□□□ 0.33
TARDBP-217ENST00000616545 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
TARDBP-217ENST00000616545 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
TARDBP-217ENST00000616545 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-217ENST00000616545 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-217ENST00000616545 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
TARDBP-217ENST00000616545 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
TARDBP-217ENST00000616545 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
TARDBP-217ENST00000616545 PKD2Q13563 968 aa17.06■□□□□ 0.32
TARDBP-217ENST00000616545 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
TARDBP-217ENST00000616545 TET3O43151 1660 aa17.06■□□□□ 0.32
TARDBP-217ENST00000616545 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
TARDBP-217ENST00000616545 ABCC3O15438 1527 aa17.05■□□□□ 0.32
TARDBP-217ENST00000616545 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
TARDBP-217ENST00000616545 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
TARDBP-217ENST00000616545 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
TARDBP-217ENST00000616545 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
TARDBP-217ENST00000616545 MLECQ14165 292 aa17■□□□□ 0.31
TARDBP-217ENST00000616545 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
TARDBP-217ENST00000616545 CEP152O94986 1710 aa16.98■□□□□ 0.31
TARDBP-217ENST00000616545 PTPRTO14522 1441 aa16.97■□□□□ 0.31
TARDBP-217ENST00000616545 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
TARDBP-217ENST00000616545 NPATQ14207 1427 aa16.96■□□□□ 0.31
TARDBP-217ENST00000616545 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
TARDBP-217ENST00000616545 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
TARDBP-217ENST00000616545 E9PCH4 1651 aa16.96■□□□□ 0.31
TARDBP-217ENST00000616545 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
TARDBP-217ENST00000616545 FOXD1Q16676 465 aa16.94■□□□□ 0.3
TARDBP-217ENST00000616545 CLTCQ00610 1675 aaKnown RBP16.93■□□□□ 0.3
TARDBP-217ENST00000616545 NOS1P29475 1434 aa16.93■□□□□ 0.3
TARDBP-217ENST00000616545 TRPM2O94759 1503 aa16.92■□□□□ 0.3
TARDBP-217ENST00000616545 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
TARDBP-217ENST00000616545 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
TARDBP-217ENST00000616545 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
TARDBP-217ENST00000616545 FER1L4A9Z1Z3 1794 aa16.9■□□□□ 0.3
TARDBP-217ENST00000616545 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
TARDBP-217ENST00000616545 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
TARDBP-217ENST00000616545 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
TARDBP-217ENST00000616545 SPATA31D1Q6ZQQ2 1576 aa16.88■□□□□ 0.29
TARDBP-217ENST00000616545 PREX1Q8TCU6 1659 aa16.86■□□□□ 0.29
TARDBP-217ENST00000616545 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
TARDBP-217ENST00000616545 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
TARDBP-217ENST00000616545 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
TARDBP-217ENST00000616545 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
TARDBP-217ENST00000616545 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
TARDBP-217ENST00000616545 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
TARDBP-217ENST00000616545 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
TARDBP-217ENST00000616545 TNRQ92752 1358 aa16.82■□□□□ 0.28
TARDBP-217ENST00000616545 C3P01024 1663 aa16.81■□□□□ 0.28
TARDBP-217ENST00000616545 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
TARDBP-217ENST00000616545 SYNMO15061 1565 aa16.81■□□□□ 0.28
TARDBP-217ENST00000616545 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
TARDBP-217ENST00000616545 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
TARDBP-217ENST00000616545 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
TARDBP-217ENST00000616545 IDI1Q13907 227 aa16.79■□□□□ 0.28
TARDBP-217ENST00000616545 PTPRMP28827 1452 aa16.79■□□□□ 0.28
TARDBP-217ENST00000616545 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
TARDBP-217ENST00000616545 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
TARDBP-217ENST00000616545 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
TARDBP-217ENST00000616545 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
TARDBP-217ENST00000616545 KIF1BO60333 1816 aa16.76■□□□□ 0.27
TARDBP-217ENST00000616545 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
TARDBP-217ENST00000616545 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
TARDBP-217ENST00000616545 SETD1BQ9UPS6 1966 aaKnown RBP16.75■□□□□ 0.27
TARDBP-217ENST00000616545 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
TARDBP-217ENST00000616545 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
TARDBP-217ENST00000616545 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
TARDBP-217ENST00000616545 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-217ENST00000616545 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
TARDBP-217ENST00000616545 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
TARDBP-217ENST00000616545 TMEM131LA2VDJ0 1609 aa16.71■□□□□ 0.27
TARDBP-217ENST00000616545 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
TARDBP-217ENST00000616545 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
TARDBP-217ENST00000616545 A2ML1A8K2U0 1454 aa16.7■□□□□ 0.26
TARDBP-217ENST00000616545 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
TARDBP-217ENST00000616545 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
TARDBP-217ENST00000616545 DCAF11Q8TEB1 546 aa16.69■□□□□ 0.26
TARDBP-217ENST00000616545 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
TARDBP-217ENST00000616545 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
TARDBP-217ENST00000616545 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
TARDBP-217ENST00000616545 UHRF1BP1Q6BDS2 1440 aa16.68■□□□□ 0.26
TARDBP-217ENST00000616545 MYOM2P54296 1465 aa16.67■□□□□ 0.26
TARDBP-217ENST00000616545 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms