RNA–Protein interactions for RNA: ENST00000616387.4

MED16-213, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best) BASIC

Gene MED16, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-213ENST00000616387 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
MED16-213ENST00000616387 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
MED16-213ENST00000616387 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
MED16-213ENST00000616387 KIF3BO15066 747 aa27.04■■□□□ 1.92
MED16-213ENST00000616387 TCOF1Q13428 1488 aaKnown RBP27.04■■□□□ 1.92
MED16-213ENST00000616387 ZNF142P52746 1687 aaPredicted RBP27.02■■□□□ 1.92
MED16-213ENST00000616387 ARHGEF5Q12774 1597 aa27.01■■□□□ 1.92
MED16-213ENST00000616387 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.92
MED16-213ENST00000616387 MYO3AQ8NEV4 1616 aa27■■□□□ 1.91
MED16-213ENST00000616387 FAM135AQ9P2D6 1515 aa26.99■■□□□ 1.91
MED16-213ENST00000616387 A2ML1A8K2U0 1454 aa26.99■■□□□ 1.91
MED16-213ENST00000616387 ZNF335Q9H4Z2 1342 aaPredicted RBP26.98■■□□□ 1.91
MED16-213ENST00000616387 FAM50AQ14320 339 aaKnown RBP26.98■■□□□ 1.91
MED16-213ENST00000616387 PTPN23Q9H3S7 1636 aa26.98■■□□□ 1.91
MED16-213ENST00000616387 WASHC2CQ9Y4E1 1318 aa26.97■■□□□ 1.91
MED16-213ENST00000616387 FBXO31Q5XUX0 539 aaPredicted RBP26.96■■□□□ 1.91
MED16-213ENST00000616387 TNRQ92752 1358 aa26.94■■□□□ 1.9
MED16-213ENST00000616387 PZPP20742 1482 aa26.93■■□□□ 1.9
MED16-213ENST00000616387 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
MED16-213ENST00000616387 DNMT1P26358 1616 aaKnown RBP26.91■■□□□ 1.9
MED16-213ENST00000616387 THEMISQ8N1K5 641 aaPredicted RBP26.9■■□□□ 1.9
MED16-213ENST00000616387 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
MED16-213ENST00000616387 ABCC5O15440 1437 aa26.9■■□□□ 1.9
MED16-213ENST00000616387 UBAP1LF5GYI3 381 aa26.87■■□□□ 1.89
MED16-213ENST00000616387 DAPK1P53355 1430 aa26.87■■□□□ 1.89
MED16-213ENST00000616387 ANKLE2Q86XL3 938 aa26.86■■□□□ 1.89
MED16-213ENST00000616387 MAST1Q9Y2H9 1570 aa26.85■■□□□ 1.89
MED16-213ENST00000616387 ILDR2Q71H61 639 aa26.84■■□□□ 1.89
MED16-213ENST00000616387 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
MED16-213ENST00000616387 SHANK2Q9UPX8 1470 aa26.83■■□□□ 1.89
MED16-213ENST00000616387 CHIC2Q9UKJ5 165 aa26.83■■□□□ 1.89
MED16-213ENST00000616387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.886e-7■■■■□ 25.6
MED16-213ENST00000616387 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
MED16-213ENST00000616387 ANKRD30AQ9BXX3 1397 aa26.8■■□□□ 1.88
MED16-213ENST00000616387 SOCS7O14512 581 aa26.78■■□□□ 1.88
MED16-213ENST00000616387 MED14O60244 1454 aa26.75■■□□□ 1.87
MED16-213ENST00000616387 KIF15Q9NS87 1388 aa26.75■■□□□ 1.87
MED16-213ENST00000616387 NEURL4Q96JN8 1562 aa26.75■■□□□ 1.87
MED16-213ENST00000616387 RNF17Q9BXT8 1623 aaKnown RBP26.74■■□□□ 1.87
MED16-213ENST00000616387 CPS1P31327 1500 aa26.74■■□□□ 1.87
MED16-213ENST00000616387 UGGT1Q9NYU2 1555 aa26.73■■□□□ 1.87
MED16-213ENST00000616387 TOM1O60784 492 aa26.73■■□□□ 1.87
MED16-213ENST00000616387 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
MED16-213ENST00000616387 DUOX2Q9NRD8 1548 aa26.72■■□□□ 1.87
MED16-213ENST00000616387 ABCC3O15438 1527 aa26.71■■□□□ 1.87
MED16-213ENST00000616387 POLR1AO95602 1720 aaPredicted RBP26.71■■□□□ 1.87
MED16-213ENST00000616387 CROCC2H7BZ55 1655 aa26.71■■□□□ 1.87
MED16-213ENST00000616387 ITGAEP38570 1179 aa26.71■■□□□ 1.87
MED16-213ENST00000616387 EIF2AK4Q9P2K8 1649 aaKnown RBP26.7■■□□□ 1.86
MED16-213ENST00000616387 DEPDC5O75140 1603 aa26.69■■□□□ 1.86
MED16-213ENST00000616387 NPHP4O75161 1426 aaPredicted RBP26.69■■□□□ 1.86
MED16-213ENST00000616387 SPATA31D1Q6ZQQ2 1576 aa26.69■■□□□ 1.86
MED16-213ENST00000616387 ADGRL2O95490 1459 aa26.68■■□□□ 1.86
MED16-213ENST00000616387 ZC3H13Q5T200 1668 aaKnown RBP26.67■■□□□ 1.86
MED16-213ENST00000616387 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
MED16-213ENST00000616387 ERVK-7P63135 1459 aa26.65■■□□□ 1.86
MED16-213ENST00000616387 ROCK1Q13464 1354 aa26.64■■□□□ 1.86
MED16-213ENST00000616387 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
MED16-213ENST00000616387 ARHGAP31Q2M1Z3 1444 aa26.63■■□□□ 1.85
MED16-213ENST00000616387 MROH1Q8NDA8 1641 aa26.62■■□□□ 1.85
MED16-213ENST00000616387 HSPA1LP34931 641 aa26.59■■□□□ 1.85
MED16-213ENST00000616387 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
MED16-213ENST00000616387 ANKRD50Q9ULJ7 1429 aa26.57■■□□□ 1.84
MED16-213ENST00000616387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.56■■□□□ 1.84
MED16-213ENST00000616387 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
MED16-213ENST00000616387 KANK1Q14678 1352 aa26.55■■□□□ 1.84
MED16-213ENST00000616387 CFAP65Q6ZU64 1925 aaKnown RBP26.55■■□□□ 1.84
MED16-213ENST00000616387 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
MED16-213ENST00000616387 LTKP29376 864 aa26.53■■□□□ 1.84
MED16-213ENST00000616387 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
MED16-213ENST00000616387 PRDM15P57071 1507 aaPredicted RBP26.51■■□□□ 1.83
MED16-213ENST00000616387 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
MED16-213ENST00000616387 CEP152O94986 1710 aa26.5■■□□□ 1.83
MED16-213ENST00000616387 SLIT1O75093 1534 aa26.49■■□□□ 1.83
MED16-213ENST00000616387 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
MED16-213ENST00000616387 UBR1Q8IWV7 1749 aa26.49■■□□□ 1.83
MED16-213ENST00000616387 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
MED16-213ENST00000616387 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
MED16-213ENST00000616387 ALKQ9UM73 1620 aa26.46■■□□□ 1.83
MED16-213ENST00000616387 STRCP1A6NGW2 1772 aa26.43■■□□□ 1.82
MED16-213ENST00000616387 IDI1Q13907 227 aa26.43■■□□□ 1.82
MED16-213ENST00000616387 LMTK2Q8IWU2 1503 aa26.43■■□□□ 1.82
MED16-213ENST00000616387 TMEM2Q9UHN6 1383 aa26.43■■□□□ 1.82
MED16-213ENST00000616387 STAG3Q9UJ98 1225 aa26.4■■□□□ 1.82
MED16-213ENST00000616387 SYNMO15061 1565 aa26.38■■□□□ 1.81
MED16-213ENST00000616387 SLC52A1Q9NWF4 448 aa26.38■■□□□ 1.81
MED16-213ENST00000616387 NAIPQ13075 1403 aa26.37■■□□□ 1.81
MED16-213ENST00000616387 KDM5AP29375 1690 aaKnown RBP26.36■■□□□ 1.81
MED16-213ENST00000616387 HFM1A2PYH4 1435 aa26.35■■□□□ 1.81
MED16-213ENST00000616387 NOS1P29475 1434 aa26.35■■□□□ 1.81
MED16-213ENST00000616387 MED1Q15648 1581 aaPredicted RBP26.35■■□□□ 1.81
MED16-213ENST00000616387 NUP155O75694 1391 aa26.34■■□□□ 1.81
MED16-213ENST00000616387 PIK3C2BO00750 1634 aa26.34■■□□□ 1.81
MED16-213ENST00000616387 KCNA6P17658 529 aa26.33■■□□□ 1.81
MED16-213ENST00000616387 EFCAB6Q5THR3 1501 aa26.31■■□□□ 1.8
MED16-213ENST00000616387 ACIN1Q9UKV3 1341 aaKnown RBP26.28■■□□□ 1.8
MED16-213ENST00000616387 UNC13BO14795 1591 aa26.27■■□□□ 1.8
MED16-213ENST00000616387 TET3O43151 1660 aa26.27■■□□□ 1.8
MED16-213ENST00000616387 RPRD2Q5VT52 1461 aaKnown RBP26.26■■□□□ 1.79
MED16-213ENST00000616387 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms