RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 KIF3BO15066 747 aa19.18■□□□□ 0.66
PCDHGC3-203ENST00000616230 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
PCDHGC3-203ENST00000616230 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
PCDHGC3-203ENST00000616230 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
PCDHGC3-203ENST00000616230 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
PCDHGC3-203ENST00000616230 PTPRKQ15262 1439 aa19.17■□□□□ 0.66
PCDHGC3-203ENST00000616230 ABCC5O15440 1437 aa19.16■□□□□ 0.66
PCDHGC3-203ENST00000616230 DAPK1P53355 1430 aa19.14■□□□□ 0.65
PCDHGC3-203ENST00000616230 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
PCDHGC3-203ENST00000616230 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
PCDHGC3-203ENST00000616230 MROH1Q8NDA8 1641 aa19.12■□□□□ 0.65
PCDHGC3-203ENST00000616230 ILDR1Q86SU0 546 aaPredicted RBP19.11■□□□□ 0.65
PCDHGC3-203ENST00000616230 CEP170BQ9Y4F5 1589 aaPredicted RBP19.1■□□□□ 0.65
PCDHGC3-203ENST00000616230 PZPP20742 1482 aa19.1■□□□□ 0.65
PCDHGC3-203ENST00000616230 CAMSAP1Q5T5Y3 1602 aa19.09■□□□□ 0.65
PCDHGC3-203ENST00000616230 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
PCDHGC3-203ENST00000616230 KIF15Q9NS87 1388 aa19.08■□□□□ 0.65
PCDHGC3-203ENST00000616230 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.65
PCDHGC3-203ENST00000616230 CEP152O94986 1710 aa19.08■□□□□ 0.64
PCDHGC3-203ENST00000616230 ABCC3O15438 1527 aa19.07■□□□□ 0.64
PCDHGC3-203ENST00000616230 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
PCDHGC3-203ENST00000616230 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
PCDHGC3-203ENST00000616230 PRDM15P57071 1507 aaPredicted RBP19.05■□□□□ 0.64
PCDHGC3-203ENST00000616230 DEPDC5O75140 1603 aa19.05■□□□□ 0.64
PCDHGC3-203ENST00000616230 PTPRTO14522 1441 aa19.05■□□□□ 0.64
PCDHGC3-203ENST00000616230 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
PCDHGC3-203ENST00000616230 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
PCDHGC3-203ENST00000616230 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
PCDHGC3-203ENST00000616230 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
PCDHGC3-203ENST00000616230 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
PCDHGC3-203ENST00000616230 TNRQ92752 1358 aa19.02■□□□□ 0.64
PCDHGC3-203ENST00000616230 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.64
PCDHGC3-203ENST00000616230 SPATA31D1Q6ZQQ2 1576 aa19.01■□□□□ 0.63
PCDHGC3-203ENST00000616230 FBXO41Q8TF61 875 aa19■□□□□ 0.63
PCDHGC3-203ENST00000616230 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PCDHGC3-203ENST00000616230 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
PCDHGC3-203ENST00000616230 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
PCDHGC3-203ENST00000616230 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
PCDHGC3-203ENST00000616230 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
PCDHGC3-203ENST00000616230 ERVK-7P63135 1459 aa18.97■□□□□ 0.63
PCDHGC3-203ENST00000616230 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
PCDHGC3-203ENST00000616230 PKD2Q13563 968 aa18.95■□□□□ 0.62
PCDHGC3-203ENST00000616230 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
PCDHGC3-203ENST00000616230 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
PCDHGC3-203ENST00000616230 ARHGAP31Q2M1Z3 1444 aa18.94■□□□□ 0.62
PCDHGC3-203ENST00000616230 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
PCDHGC3-203ENST00000616230 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
PCDHGC3-203ENST00000616230 LTBP4Q8N2S1 1624 aa18.92■□□□□ 0.62
PCDHGC3-203ENST00000616230 NEURL4Q96JN8 1562 aa18.91■□□□□ 0.62
PCDHGC3-203ENST00000616230 KANK1Q14678 1352 aa18.91■□□□□ 0.62
PCDHGC3-203ENST00000616230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCDHGC3-203ENST00000616230 UBR1Q8IWV7 1749 aa18.89■□□□□ 0.61
PCDHGC3-203ENST00000616230 PPARGC1BQ86YN6 1023 aaKnown RBP18.89■□□□□ 0.61
PCDHGC3-203ENST00000616230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
PCDHGC3-203ENST00000616230 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
PCDHGC3-203ENST00000616230 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
PCDHGC3-203ENST00000616230 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC3-203ENST00000616230 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
PCDHGC3-203ENST00000616230 UNC13BO14795 1591 aa18.85■□□□□ 0.61
PCDHGC3-203ENST00000616230 PIK3C2BO00750 1634 aa18.83■□□□□ 0.61
PCDHGC3-203ENST00000616230 MED14O60244 1454 aa18.83■□□□□ 0.6
PCDHGC3-203ENST00000616230 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
PCDHGC3-203ENST00000616230 TET3O43151 1660 aa18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 SYNMO15061 1565 aa18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 ANKLE2Q86XL3 938 aa18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 GCC2Q8IWJ2 1684 aa18.82■□□□□ 0.6
PCDHGC3-203ENST00000616230 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
PCDHGC3-203ENST00000616230 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
PCDHGC3-203ENST00000616230 NOS1P29475 1434 aa18.8■□□□□ 0.6
PCDHGC3-203ENST00000616230 RPRD2Q5VT52 1461 aaKnown RBP18.79■□□□□ 0.6
PCDHGC3-203ENST00000616230 SLIT1O75093 1534 aa18.79■□□□□ 0.6
PCDHGC3-203ENST00000616230 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
PCDHGC3-203ENST00000616230 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
PCDHGC3-203ENST00000616230 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.6
PCDHGC3-203ENST00000616230 ITGAEP38570 1179 aa18.77■□□□□ 0.6
PCDHGC3-203ENST00000616230 E9PCH4 1651 aa18.75■□□□□ 0.59
PCDHGC3-203ENST00000616230 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
PCDHGC3-203ENST00000616230 ADGRB3O60242 1522 aa18.73■□□□□ 0.59
PCDHGC3-203ENST00000616230 CPS1P31327 1500 aa18.73■□□□□ 0.59
PCDHGC3-203ENST00000616230 IDI1Q13907 227 aa18.72■□□□□ 0.59
PCDHGC3-203ENST00000616230 FOXD1Q16676 465 aa18.72■□□□□ 0.59
PCDHGC3-203ENST00000616230 MYO5BQ9ULV0 1848 aa18.71■□□□□ 0.59
PCDHGC3-203ENST00000616230 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
PCDHGC3-203ENST00000616230 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
PCDHGC3-203ENST00000616230 LTKP29376 864 aa18.69■□□□□ 0.58
PCDHGC3-203ENST00000616230 SLC52A1Q9NWF4 448 aa18.69■□□□□ 0.58
PCDHGC3-203ENST00000616230 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
PCDHGC3-203ENST00000616230 NUP155O75694 1391 aa18.68■□□□□ 0.58
PCDHGC3-203ENST00000616230 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
PCDHGC3-203ENST00000616230 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
PCDHGC3-203ENST00000616230 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
PCDHGC3-203ENST00000616230 NAIPQ13075 1403 aa18.66■□□□□ 0.58
PCDHGC3-203ENST00000616230 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
PCDHGC3-203ENST00000616230 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
PCDHGC3-203ENST00000616230 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
PCDHGC3-203ENST00000616230 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
PCDHGC3-203ENST00000616230 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
PCDHGC3-203ENST00000616230 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms