RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 DAPK1P53355 1430 aa16.26■□□□□ 0.19
LINC00649-217ENST00000616030 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
LINC00649-217ENST00000616030 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
LINC00649-217ENST00000616030 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
LINC00649-217ENST00000616030 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
LINC00649-217ENST00000616030 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
LINC00649-217ENST00000616030 ERBINQ96RT1 1412 aa16.23■□□□□ 0.19
LINC00649-217ENST00000616030 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
LINC00649-217ENST00000616030 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
LINC00649-217ENST00000616030 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
LINC00649-217ENST00000616030 PZPP20742 1482 aa16.22■□□□□ 0.19
LINC00649-217ENST00000616030 GGT6Q6P531 493 aa16.2■□□□□ 0.18
LINC00649-217ENST00000616030 ABCC3O15438 1527 aa16.19■□□□□ 0.18
LINC00649-217ENST00000616030 KIF15Q9NS87 1388 aa16.19■□□□□ 0.18
LINC00649-217ENST00000616030 KIF3BO15066 747 aa16.19■□□□□ 0.18
LINC00649-217ENST00000616030 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
LINC00649-217ENST00000616030 HSPA2P54652 639 aa16.18■□□□□ 0.18
LINC00649-217ENST00000616030 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
LINC00649-217ENST00000616030 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
LINC00649-217ENST00000616030 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
LINC00649-217ENST00000616030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC00649-217ENST00000616030 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
LINC00649-217ENST00000616030 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
LINC00649-217ENST00000616030 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
LINC00649-217ENST00000616030 PTPRTO14522 1441 aa16.14■□□□□ 0.17
LINC00649-217ENST00000616030 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
LINC00649-217ENST00000616030 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
LINC00649-217ENST00000616030 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.17
LINC00649-217ENST00000616030 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
LINC00649-217ENST00000616030 CEP152O94986 1710 aa16.13■□□□□ 0.17
LINC00649-217ENST00000616030 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
LINC00649-217ENST00000616030 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
LINC00649-217ENST00000616030 TNRQ92752 1358 aa16.1■□□□□ 0.17
LINC00649-217ENST00000616030 ERVK-7P63135 1459 aa16.1■□□□□ 0.17
LINC00649-217ENST00000616030 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
LINC00649-217ENST00000616030 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
LINC00649-217ENST00000616030 RRBP1Q9P2E9 1410 aaKnown RBP16.06■□□□□ 0.16
LINC00649-217ENST00000616030 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
LINC00649-217ENST00000616030 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
LINC00649-217ENST00000616030 UNC13BO14795 1591 aa16.05■□□□□ 0.16
LINC00649-217ENST00000616030 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
LINC00649-217ENST00000616030 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
LINC00649-217ENST00000616030 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
LINC00649-217ENST00000616030 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
LINC00649-217ENST00000616030 PKD2Q13563 968 aa16.03■□□□□ 0.16
LINC00649-217ENST00000616030 NEURL4Q96JN8 1562 aa16.03■□□□□ 0.16
LINC00649-217ENST00000616030 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
LINC00649-217ENST00000616030 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
LINC00649-217ENST00000616030 KANK1Q14678 1352 aa16.01■□□□□ 0.15
LINC00649-217ENST00000616030 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
LINC00649-217ENST00000616030 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
LINC00649-217ENST00000616030 RPRD2Q5VT52 1461 aaKnown RBP16.01■□□□□ 0.15
LINC00649-217ENST00000616030 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
LINC00649-217ENST00000616030 TET3O43151 1660 aa16■□□□□ 0.15
LINC00649-217ENST00000616030 MED14O60244 1454 aa16■□□□□ 0.15
LINC00649-217ENST00000616030 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
LINC00649-217ENST00000616030 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
LINC00649-217ENST00000616030 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
LINC00649-217ENST00000616030 GCC2Q8IWJ2 1684 aa15.99■□□□□ 0.15
LINC00649-217ENST00000616030 NOS1P29475 1434 aa15.98■□□□□ 0.15
LINC00649-217ENST00000616030 FBXO41Q8TF61 875 aa15.98■□□□□ 0.15
LINC00649-217ENST00000616030 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
LINC00649-217ENST00000616030 SYNMO15061 1565 aa15.97■□□□□ 0.15
LINC00649-217ENST00000616030 SLIT1O75093 1534 aa15.97■□□□□ 0.15
LINC00649-217ENST00000616030 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
LINC00649-217ENST00000616030 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
LINC00649-217ENST00000616030 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
LINC00649-217ENST00000616030 CFAP65Q6ZU64 1925 aaKnown RBP15.94■□□□□ 0.14
LINC00649-217ENST00000616030 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
LINC00649-217ENST00000616030 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
LINC00649-217ENST00000616030 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
LINC00649-217ENST00000616030 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
LINC00649-217ENST00000616030 E9PCH4 1651 aa15.9■□□□□ 0.14
LINC00649-217ENST00000616030 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
LINC00649-217ENST00000616030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00649-217ENST00000616030 ANKLE2Q86XL3 938 aa15.88■□□□□ 0.13
LINC00649-217ENST00000616030 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
LINC00649-217ENST00000616030 CPS1P31327 1500 aa15.88■□□□□ 0.13
LINC00649-217ENST00000616030 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
LINC00649-217ENST00000616030 NAIPQ13075 1403 aa15.87■□□□□ 0.13
LINC00649-217ENST00000616030 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
LINC00649-217ENST00000616030 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
LINC00649-217ENST00000616030 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
LINC00649-217ENST00000616030 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
LINC00649-217ENST00000616030 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.13
LINC00649-217ENST00000616030 IDI1Q13907 227 aa15.83■□□□□ 0.12
LINC00649-217ENST00000616030 NUP155O75694 1391 aa15.81■□□□□ 0.12
LINC00649-217ENST00000616030 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
LINC00649-217ENST00000616030 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
LINC00649-217ENST00000616030 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
LINC00649-217ENST00000616030 MYO5BQ9ULV0 1848 aa15.8■□□□□ 0.12
LINC00649-217ENST00000616030 LTKP29376 864 aa15.79■□□□□ 0.12
LINC00649-217ENST00000616030 ITGAEP38570 1179 aa15.77■□□□□ 0.12
LINC00649-217ENST00000616030 TRPM2O94759 1503 aa15.76■□□□□ 0.11
LINC00649-217ENST00000616030 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
LINC00649-217ENST00000616030 EID1Q9Y6B2 187 aa15.75■□□□□ 0.11
LINC00649-217ENST00000616030 TXNDC2Q86VQ3 553 aa15.74■□□□□ 0.11
LINC00649-217ENST00000616030 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
LINC00649-217ENST00000616030 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
LINC00649-217ENST00000616030 ALKQ9UM73 1620 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms