RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 ATP10AO60312 1499 aa20.36■□□□□ 0.85
CDKN1A-208ENST00000615513 ROCK2O75116 1388 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-208ENST00000615513 PLA2R1Q13018 1463 aa20.35■□□□□ 0.85
CDKN1A-208ENST00000615513 RTEL1-TNFRSF6BF6WH68 1400 aa20.35■□□□□ 0.85
CDKN1A-208ENST00000615513 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
CDKN1A-208ENST00000615513 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.84
CDKN1A-208ENST00000615513 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.84
CDKN1A-208ENST00000615513 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
CDKN1A-208ENST00000615513 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-208ENST00000615513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.842e-7■□□□□ 8
CDKN1A-208ENST00000615513 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
CDKN1A-208ENST00000615513 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
CDKN1A-208ENST00000615513 NEFLP07196 543 aa20.3■□□□□ 0.84
CDKN1A-208ENST00000615513 FKBP8Q14318 412 aa20.28■□□□□ 0.84
CDKN1A-208ENST00000615513 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
CDKN1A-208ENST00000615513 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
CDKN1A-208ENST00000615513 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
CDKN1A-208ENST00000615513 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.83
CDKN1A-208ENST00000615513 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
CDKN1A-208ENST00000615513 A2MP01023 1474 aa20.26■□□□□ 0.83
CDKN1A-208ENST00000615513 GPRASP1Q5JY77 1395 aa20.26■□□□□ 0.83
CDKN1A-208ENST00000615513 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
CDKN1A-208ENST00000615513 ST20-MTHFSA0A0A6YYL1 179 aa20.24■□□□□ 0.83
CDKN1A-208ENST00000615513 LAMC1P11047 1609 aa20.24■□□□□ 0.83
CDKN1A-208ENST00000615513 FANCAO15360 1455 aa20.23■□□□□ 0.83
CDKN1A-208ENST00000615513 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
CDKN1A-208ENST00000615513 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
CDKN1A-208ENST00000615513 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
CDKN1A-208ENST00000615513 POLR3GLQ9BT43 218 aa20.2■□□□□ 0.82
CDKN1A-208ENST00000615513 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
CDKN1A-208ENST00000615513 INO80Q9ULG1 1556 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-208ENST00000615513 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
CDKN1A-208ENST00000615513 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
CDKN1A-208ENST00000615513 ATP7AQ04656 1500 aa20.18■□□□□ 0.82
CDKN1A-208ENST00000615513 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-208ENST00000615513 ASXL2Q76L83 1435 aa20.17■□□□□ 0.82
CDKN1A-208ENST00000615513 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
CDKN1A-208ENST00000615513 TRPM2O94759 1503 aa20.15■□□□□ 0.82
CDKN1A-208ENST00000615513 E9PCH4 1651 aa20.15■□□□□ 0.82
CDKN1A-208ENST00000615513 ADGRL1O94910 1474 aa20.15■□□□□ 0.82
CDKN1A-208ENST00000615513 PTPRTO14522 1441 aa20.15■□□□□ 0.82
CDKN1A-208ENST00000615513 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
CDKN1A-208ENST00000615513 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
CDKN1A-208ENST00000615513 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
CDKN1A-208ENST00000615513 SCAPERQ9BY12 1400 aa20.13■□□□□ 0.81
CDKN1A-208ENST00000615513 BCANQ96GW7 911 aa20.13■□□□□ 0.81
CDKN1A-208ENST00000615513 KANK1Q14678 1352 aa20.12■□□□□ 0.81
CDKN1A-208ENST00000615513 TET3O43151 1660 aa20.12■□□□□ 0.81
CDKN1A-208ENST00000615513 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
CDKN1A-208ENST00000615513 RALBP1Q15311 655 aa20.1■□□□□ 0.81
CDKN1A-208ENST00000615513 COL17A1Q9UMD9 1497 aaPredicted RBP20.1■□□□□ 0.81
CDKN1A-208ENST00000615513 RNF17Q9BXT8 1623 aaKnown RBP20.1■□□□□ 0.81
CDKN1A-208ENST00000615513 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
CDKN1A-208ENST00000615513 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.81
CDKN1A-208ENST00000615513 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
CDKN1A-208ENST00000615513 TESK2Q96S53 571 aa20.07■□□□□ 0.8
CDKN1A-208ENST00000615513 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
CDKN1A-208ENST00000615513 CEP152O94986 1710 aa20.07■□□□□ 0.8
CDKN1A-208ENST00000615513 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
CDKN1A-208ENST00000615513 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CDKN1A-208ENST00000615513 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-208ENST00000615513 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
CDKN1A-208ENST00000615513 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
CDKN1A-208ENST00000615513 CLTCL1P53675 1640 aa20.04■□□□□ 0.8
CDKN1A-208ENST00000615513 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
CDKN1A-208ENST00000615513 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
CDKN1A-208ENST00000615513 KIF3BO15066 747 aa20.03■□□□□ 0.8
CDKN1A-208ENST00000615513 TMC1Q8TDI8 760 aa20.03■□□□□ 0.8
CDKN1A-208ENST00000615513 MROH1Q8NDA8 1641 aa20.03■□□□□ 0.8
CDKN1A-208ENST00000615513 CFAP74Q9C0B2 1584 aa20.03■□□□□ 0.8
CDKN1A-208ENST00000615513 TMF1P82094 1093 aa20.02■□□□□ 0.79
CDKN1A-208ENST00000615513 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
CDKN1A-208ENST00000615513 PARD3Q8TEW0 1356 aa20.01■□□□□ 0.79
CDKN1A-208ENST00000615513 DISP3Q9P2K9 1392 aa20.01■□□□□ 0.79
CDKN1A-208ENST00000615513 KIDINS220Q9ULH0 1771 aa20.01■□□□□ 0.79
CDKN1A-208ENST00000615513 PER1O15534 1290 aaPredicted RBP20■□□□□ 0.79
CDKN1A-208ENST00000615513 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
CDKN1A-208ENST00000615513 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
CDKN1A-208ENST00000615513 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
CDKN1A-208ENST00000615513 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
CDKN1A-208ENST00000615513 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
CDKN1A-208ENST00000615513 IQGAP1P46940 1657 aa19.98■□□□□ 0.79
CDKN1A-208ENST00000615513 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
CDKN1A-208ENST00000615513 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
CDKN1A-208ENST00000615513 POGZQ7Z3K3 1410 aa19.96■□□□□ 0.79
CDKN1A-208ENST00000615513 SCAF11Q99590 1463 aaKnown RBP19.96■□□□□ 0.79
CDKN1A-208ENST00000615513 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
CDKN1A-208ENST00000615513 KIAA1210Q9ULL0 1709 aa19.95■□□□□ 0.78
CDKN1A-208ENST00000615513 MYOM2P54296 1465 aa19.93■□□□□ 0.78
CDKN1A-208ENST00000615513 NUDCQ9Y266 331 aa19.93■□□□□ 0.78
CDKN1A-208ENST00000615513 CDCA8Q53HL2 280 aa19.91■□□□□ 0.78
CDKN1A-208ENST00000615513 PANK3Q9H999 370 aa19.91■□□□□ 0.78
CDKN1A-208ENST00000615513 PPP4R2Q9NY27 417 aa19.9■□□□□ 0.78
CDKN1A-208ENST00000615513 EIF3AQ14152 1382 aaKnown RBP19.9■□□□□ 0.78
CDKN1A-208ENST00000615513 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
CDKN1A-208ENST00000615513 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
CDKN1A-208ENST00000615513 INSRP06213 1382 aa19.9■□□□□ 0.78
CDKN1A-208ENST00000615513 NEO1Q92859 1461 aa19.89■□□□□ 0.77
CDKN1A-208ENST00000615513 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
CDKN1A-208ENST00000615513 MAP3K4Q9Y6R4 1608 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms