RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-223ENST00000615442 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
PVT1-223ENST00000615442 WASHC2CQ9Y4E1 1318 aa15.73■□□□□ 0.11
PVT1-223ENST00000615442 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
PVT1-223ENST00000615442 RNF17Q9BXT8 1623 aaKnown RBP15.72■□□□□ 0.11
PVT1-223ENST00000615442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
PVT1-223ENST00000615442 FAM135AQ9P2D6 1515 aa15.72■□□□□ 0.11
PVT1-223ENST00000615442 KANK1Q14678 1352 aa15.72■□□□□ 0.11
PVT1-223ENST00000615442 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.11
PVT1-223ENST00000615442 HRCP23327 699 aa15.69■□□□□ 0.1
PVT1-223ENST00000615442 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
PVT1-223ENST00000615442 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
PVT1-223ENST00000615442 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
PVT1-223ENST00000615442 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
PVT1-223ENST00000615442 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
PVT1-223ENST00000615442 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
PVT1-223ENST00000615442 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
PVT1-223ENST00000615442 PTPRMP28827 1452 aa15.67■□□□□ 0.1
PVT1-223ENST00000615442 NUP155O75694 1391 aa15.67■□□□□ 0.1
PVT1-223ENST00000615442 UNC13BO14795 1591 aa15.66■□□□□ 0.1
PVT1-223ENST00000615442 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
PVT1-223ENST00000615442 ABCC3O15438 1527 aa15.65■□□□□ 0.1
PVT1-223ENST00000615442 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
PVT1-223ENST00000615442 FER1L4A9Z1Z3 1794 aa15.64■□□□□ 0.1
PVT1-223ENST00000615442 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
PVT1-223ENST00000615442 LMTK2Q8IWU2 1503 aa15.64■□□□□ 0.09
PVT1-223ENST00000615442 CEBPAP49715 358 aaPredicted RBP15.64■□□□□ 0.09
PVT1-223ENST00000615442 ZC3H13Q5T200 1668 aaKnown RBP15.63■□□□□ 0.09
PVT1-223ENST00000615442 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
PVT1-223ENST00000615442 ARHGAP31Q2M1Z3 1444 aa15.62■□□□□ 0.09
PVT1-223ENST00000615442 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
PVT1-223ENST00000615442 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
PVT1-223ENST00000615442 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
PVT1-223ENST00000615442 PZPP20742 1482 aa15.59■□□□□ 0.09
PVT1-223ENST00000615442 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
PVT1-223ENST00000615442 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
PVT1-223ENST00000615442 NPATQ14207 1427 aa15.59■□□□□ 0.09
PVT1-223ENST00000615442 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
PVT1-223ENST00000615442 MPHOSPH9Q99550 1183 aa15.57■□□□□ 0.08
PVT1-223ENST00000615442 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
PVT1-223ENST00000615442 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
PVT1-223ENST00000615442 RPRD2Q5VT52 1461 aaKnown RBP15.57■□□□□ 0.08
PVT1-223ENST00000615442 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
PVT1-223ENST00000615442 EFCAB6Q5THR3 1501 aa15.56■□□□□ 0.08
PVT1-223ENST00000615442 C3P01024 1663 aa15.56■□□□□ 0.08
PVT1-223ENST00000615442 CEP152O94986 1710 aa15.55■□□□□ 0.08
PVT1-223ENST00000615442 TET3O43151 1660 aa15.55■□□□□ 0.08
PVT1-223ENST00000615442 PKD2Q13563 968 aa15.54■□□□□ 0.08
PVT1-223ENST00000615442 ERVK-7P63135 1459 aa15.52■□□□□ 0.08
PVT1-223ENST00000615442 TNRQ92752 1358 aa15.52■□□□□ 0.08
PVT1-223ENST00000615442 SPATA31D1Q6ZQQ2 1576 aa15.52■□□□□ 0.07
PVT1-223ENST00000615442 NOS1P29475 1434 aa15.51■□□□□ 0.07
PVT1-223ENST00000615442 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
PVT1-223ENST00000615442 PTPRTO14522 1441 aa15.49■□□□□ 0.07
PVT1-223ENST00000615442 E9PCH4 1651 aa15.48■□□□□ 0.07
PVT1-223ENST00000615442 UHRF1BP1Q6BDS2 1440 aa15.48■□□□□ 0.07
PVT1-223ENST00000615442 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
PVT1-223ENST00000615442 PREX1Q8TCU6 1659 aa15.47■□□□□ 0.07
PVT1-223ENST00000615442 IDI1Q13907 227 aa15.46■□□□□ 0.07
PVT1-223ENST00000615442 FOXD1Q16676 465 aa15.45■□□□□ 0.06
PVT1-223ENST00000615442 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
PVT1-223ENST00000615442 PLA2R1Q13018 1463 aa15.43■□□□□ 0.06
PVT1-223ENST00000615442 SETD1BQ9UPS6 1966 aaKnown RBP15.43■□□□□ 0.06
PVT1-223ENST00000615442 SYNMO15061 1565 aa15.42■□□□□ 0.06
PVT1-223ENST00000615442 LMTK3Q96Q04 1460 aa15.42■□□□□ 0.06
PVT1-223ENST00000615442 THEMISQ8N1K5 641 aaPredicted RBP15.42■□□□□ 0.06
PVT1-223ENST00000615442 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
PVT1-223ENST00000615442 TRPM2O94759 1503 aa15.41■□□□□ 0.06
PVT1-223ENST00000615442 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
PVT1-223ENST00000615442 CEP170BQ9Y4F5 1589 aaPredicted RBP15.4■□□□□ 0.06
PVT1-223ENST00000615442 DHX57Q6P158 1386 aaKnown RBP15.39■□□□□ 0.05
PVT1-223ENST00000615442 ANKRD30BQ9BXX2 1392 aa15.39■□□□□ 0.05
PVT1-223ENST00000615442 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
PVT1-223ENST00000615442 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
PVT1-223ENST00000615442 PIK3C2BO00750 1634 aa15.38■□□□□ 0.05
PVT1-223ENST00000615442 CCDC144AA2RUR9 1427 aa15.37■□□□□ 0.05
PVT1-223ENST00000615442 HSPA2P54652 639 aa15.37■□□□□ 0.05
PVT1-223ENST00000615442 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
PVT1-223ENST00000615442 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
PVT1-223ENST00000615442 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
PVT1-223ENST00000615442 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
PVT1-223ENST00000615442 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
PVT1-223ENST00000615442 ADGRB3O60242 1522 aa15.33■□□□□ 0.05
PVT1-223ENST00000615442 CLTCL1P53675 1640 aa15.33■□□□□ 0.04
PVT1-223ENST00000615442 ANKLE2Q86XL3 938 aa15.33■□□□□ 0.04
PVT1-223ENST00000615442 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
PVT1-223ENST00000615442 TMEM131LA2VDJ0 1609 aa15.32■□□□□ 0.04
PVT1-223ENST00000615442 UBR1Q8IWV7 1749 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 TXNDC2Q86VQ3 553 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 EID1Q9Y6B2 187 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 RPGRIP1LQ68CZ1 1315 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 ARHGAP23Q9P227 1491 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 SLIT1O75093 1534 aa15.31■□□□□ 0.04
PVT1-223ENST00000615442 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
PVT1-223ENST00000615442 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
PVT1-223ENST00000615442 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
PVT1-223ENST00000615442 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
PVT1-223ENST00000615442 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
PVT1-223ENST00000615442 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
PVT1-223ENST00000615442 LTKP29376 864 aa15.28■□□□□ 0.04
PVT1-223ENST00000615442 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms