RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ERICH3Q5RHP9 1530 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 TRIM6-TRIM34B2RNG4 842 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 MFAP1P55081 439 aaKnown RBP5.67□□□□□ -1.5
CHD9-221ENST00000615216 ZBED9Q6R2W3 1325 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 GORABQ5T7V8 394 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 ISY1Q9ULR0 285 aaKnown RBP5.67□□□□□ -1.5
CHD9-221ENST00000615216 CGNL1Q0VF96 1302 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 FOXD1Q16676 465 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 NGEFQ8N5V2 710 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 FANCD2Q9BXW9 1451 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 ATP6V1DQ9Y5K8 247 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 GGT6Q6P531 493 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 PAK3O75914 559 aaPredicted RBP5.66□□□□□ -1.5
CHD9-221ENST00000615216 SOX12O15370 315 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 ATAD2BQ9ULI0 1458 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 HECW1Q76N89 1606 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 APBB1O00213 710 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 CSB-PGBD3P0DP91 1061 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 SLKQ9H2G2 1235 aaPredicted RBP5.66□□□□□ -1.5
CHD9-221ENST00000615216 USP47Q96K76 1375 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 LRRFIP1Q32MZ4 808 aaKnown RBP5.66□□□□□ -1.5
CHD9-221ENST00000615216 FYCO1Q9BQS8 1478 aa5.66□□□□□ -1.5
CHD9-221ENST00000615216 E9PSI1 815 aa5.65□□□□□ -1.5
CHD9-221ENST00000615216 MLECQ14165 292 aa5.65□□□□□ -1.5
CHD9-221ENST00000615216 EFCAB5A4FU69 1503 aa5.65□□□□□ -1.5
CHD9-221ENST00000615216 MYOM3Q5VTT5 1437 aa5.65□□□□□ -1.51
CHD9-221ENST00000615216 EVC2Q86UK5 1308 aa5.65□□□□□ -1.51
CHD9-221ENST00000615216 DHX57Q6P158 1386 aaKnown RBP5.65□□□□□ -1.51
CHD9-221ENST00000615216 FAM161AQ3B820 660 aa5.65□□□□□ -1.51
CHD9-221ENST00000615216 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
CHD9-221ENST00000615216 TDRD9Q8NDG6 1382 aaKnown RBP5.64□□□□□ -1.51
CHD9-221ENST00000615216 TPM3P06753 285 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 AAMPQ13685 434 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 L3MBTL2Q969R5 705 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 RSPH6AQ9H0K4 717 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 WASHC2CQ9Y4E1 1318 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 CHMP3Q9Y3E7 222 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 EHBP1L1Q8N3D4 1523 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 MIA2Q96PC5 1412 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 SCAPERQ9BY12 1400 aa5.64□□□□□ -1.51
CHD9-221ENST00000615216 TPM2P07951 284 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 GAPVD1Q14C86 1478 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 RASSF8Q8NHQ8 419 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 KIF3BO15066 747 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 AMPHP49418 695 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 RRP1P56182 461 aaKnown RBP5.63□□□□□ -1.51
CHD9-221ENST00000615216 A0A0U1RQG5 324 aaPredicted RBP5.63□□□□□ -1.51
CHD9-221ENST00000615216 H3BQV1 296 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 IFFO2Q5TF58 517 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 CCDC146Q8IYE0 955 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 TPM1P09493 284 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 ZKSCAN2Q63HK3 967 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 TSHZ2Q9NRE2 1034 aa5.63□□□□□ -1.51
CHD9-221ENST00000615216 CCDC70Q6NSX1 233 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 FGD5Q6ZNL6 1462 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 RRBP1Q9P2E9 1410 aaKnown RBP5.62□□□□□ -1.51
CHD9-221ENST00000615216 REC8O95072 547 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 SETQ01105 290 aaPredicted RBP5.62□□□□□ -1.51
CHD9-221ENST00000615216 TSR1Q2NL82 804 aaKnown RBP5.62□□□□□ -1.51
CHD9-221ENST00000615216 RUFY2Q8WXA3 655 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 HNRNPMP52272 730 aaKnown RBP eCLIP5.62□□□□□ -1.517e-7■■■■□ 21.6
CHD9-221ENST00000615216 NGDNQ8NEJ9 315 aaKnown RBP5.62□□□□□ -1.51
CHD9-221ENST00000615216 FGD6Q6ZV73 1430 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 TNNT3P45378 269 aaPredicted RBP5.62□□□□□ -1.51
CHD9-221ENST00000615216 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 STAC3Q96MF2 364 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 CNTLNQ9NXG0 1405 aa5.62□□□□□ -1.51
CHD9-221ENST00000615216 TRHP20396 242 aaPredicted RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 COG3Q96JB2 828 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 HOOK1Q9UJC3 728 aaKnown RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 SF3A1Q15459 793 aaKnown RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 LRRC9Q6ZRR7 1453 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 GOLGA6L19H0YKK7 550 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 DDX19BQ9UMR2 479 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 C1orf141Q5JVX7 400 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 GPS2Q13227 327 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 CASKIN1Q8WXD9 1431 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 VGFO15240 615 aaPredicted RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 CEP89Q96ST8 783 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 TPD52L1Q16890 204 aaPredicted RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 PANK3Q9H999 370 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 FANCIQ9NVI1 1328 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 ARHGAP5Q13017 1502 aa5.61□□□□□ -1.51
CHD9-221ENST00000615216 ZNF330Q9Y3S2 320 aaPredicted RBP5.61□□□□□ -1.51
CHD9-221ENST00000615216 TOP2BQ02880 1626 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 AKAP17AQ02040 695 aaKnown RBP5.6□□□□□ -1.51
CHD9-221ENST00000615216 CUL7Q14999 1698 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 FAM184AQ8NB25 1140 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 G3V3G9 751 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 DCAF8Q5TAQ9 597 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.6□□□□□ -1.519e-7■■□□□ 12.9
CHD9-221ENST00000615216 DIAPH3Q9NSV4 1193 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 AMOTL1Q8IY63 956 aa5.6□□□□□ -1.51
CHD9-221ENST00000615216 PTPRGP23470 1445 aa5.59□□□□□ -1.51
CHD9-221ENST00000615216 SYNE3Q6ZMZ3 975 aa5.59□□□□□ -1.51
CHD9-221ENST00000615216 PDE4AP27815 886 aa5.59□□□□□ -1.51
CHD9-221ENST00000615216 NEXNQ0ZGT2 675 aa5.59□□□□□ -1.51
CHD9-221ENST00000615216 ANKRD20A12PQ8NF67 263 aa5.59□□□□□ -1.51
CHD9-221ENST00000615216 NINLQ9Y2I6 1382 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms