RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
TARDBP-216ENST00000614494 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
TARDBP-216ENST00000614494 CEP170BQ9Y4F5 1589 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-216ENST00000614494 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
TARDBP-216ENST00000614494 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
TARDBP-216ENST00000614494 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
TARDBP-216ENST00000614494 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
TARDBP-216ENST00000614494 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.57
TARDBP-216ENST00000614494 MIA2Q96PC5 1412 aa11.46□□□□□ -0.57
TARDBP-216ENST00000614494 GGT6Q6P531 493 aa11.46□□□□□ -0.57
TARDBP-216ENST00000614494 PZPP20742 1482 aa11.45□□□□□ -0.58
TARDBP-216ENST00000614494 TCOF1Q13428 1488 aaKnown RBP11.45□□□□□ -0.58
TARDBP-216ENST00000614494 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
TARDBP-216ENST00000614494 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
TARDBP-216ENST00000614494 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
TARDBP-216ENST00000614494 MAST1Q9Y2H9 1570 aa11.44□□□□□ -0.58
TARDBP-216ENST00000614494 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
TARDBP-216ENST00000614494 LTBP4Q8N2S1 1624 aa11.43□□□□□ -0.58
TARDBP-216ENST00000614494 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
TARDBP-216ENST00000614494 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-216ENST00000614494 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
TARDBP-216ENST00000614494 TNRQ92752 1358 aa11.41□□□□□ -0.58
TARDBP-216ENST00000614494 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
TARDBP-216ENST00000614494 KIF3BO15066 747 aa11.41□□□□□ -0.58
TARDBP-216ENST00000614494 RNF17Q9BXT8 1623 aaKnown RBP11.4□□□□□ -0.58
TARDBP-216ENST00000614494 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
TARDBP-216ENST00000614494 CPS1P31327 1500 aa11.4□□□□□ -0.59
TARDBP-216ENST00000614494 SHANK2Q9UPX8 1470 aa11.39□□□□□ -0.59
TARDBP-216ENST00000614494 APLP2Q06481 763 aa11.39□□□□□ -0.59
TARDBP-216ENST00000614494 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-216ENST00000614494 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
TARDBP-216ENST00000614494 DCAF8L1A6NGE4 600 aa11.38□□□□□ -0.59
TARDBP-216ENST00000614494 DUOX2Q9NRD8 1548 aa11.38□□□□□ -0.59
TARDBP-216ENST00000614494 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
TARDBP-216ENST00000614494 ERBINQ96RT1 1412 aa11.36□□□□□ -0.59
TARDBP-216ENST00000614494 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
TARDBP-216ENST00000614494 ANKLE2Q86XL3 938 aa11.36□□□□□ -0.59
TARDBP-216ENST00000614494 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
TARDBP-216ENST00000614494 MED14O60244 1454 aa11.35□□□□□ -0.59
TARDBP-216ENST00000614494 ABCC3O15438 1527 aa11.35□□□□□ -0.59
TARDBP-216ENST00000614494 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
TARDBP-216ENST00000614494 SPATA31D1Q6ZQQ2 1576 aa11.34□□□□□ -0.59
TARDBP-216ENST00000614494 PRDM15P57071 1507 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-216ENST00000614494 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
TARDBP-216ENST00000614494 ZNF335Q9H4Z2 1342 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-216ENST00000614494 KANK1Q14678 1352 aa11.32□□□□□ -0.6
TARDBP-216ENST00000614494 KIF15Q9NS87 1388 aa11.31□□□□□ -0.6
TARDBP-216ENST00000614494 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
TARDBP-216ENST00000614494 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-216ENST00000614494 NEURL4Q96JN8 1562 aa11.31□□□□□ -0.6
TARDBP-216ENST00000614494 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
TARDBP-216ENST00000614494 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
TARDBP-216ENST00000614494 UBAP1LF5GYI3 381 aa11.3□□□□□ -0.6
TARDBP-216ENST00000614494 TOM1O60784 492 aa11.3□□□□□ -0.6
TARDBP-216ENST00000614494 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
TARDBP-216ENST00000614494 SYNMO15061 1565 aa11.29□□□□□ -0.6
TARDBP-216ENST00000614494 PTPN23Q9H3S7 1636 aa11.29□□□□□ -0.6
TARDBP-216ENST00000614494 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-216ENST00000614494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
TARDBP-216ENST00000614494 MROH1Q8NDA8 1641 aa11.28□□□□□ -0.6
TARDBP-216ENST00000614494 FGD6Q6ZV73 1430 aa11.28□□□□□ -0.6
TARDBP-216ENST00000614494 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
TARDBP-216ENST00000614494 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-216ENST00000614494 DAPK1P53355 1430 aa11.27□□□□□ -0.6
TARDBP-216ENST00000614494 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.6
TARDBP-216ENST00000614494 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
TARDBP-216ENST00000614494 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-216ENST00000614494 ABCC5O15440 1437 aa11.26□□□□□ -0.61
TARDBP-216ENST00000614494 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
TARDBP-216ENST00000614494 SLIT1O75093 1534 aa11.25□□□□□ -0.61
TARDBP-216ENST00000614494 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
TARDBP-216ENST00000614494 EID1Q9Y6B2 187 aa11.25□□□□□ -0.61
TARDBP-216ENST00000614494 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
TARDBP-216ENST00000614494 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
TARDBP-216ENST00000614494 ADGRL2O95490 1459 aa11.24□□□□□ -0.61
TARDBP-216ENST00000614494 RPRD2Q5VT52 1461 aaKnown RBP11.24□□□□□ -0.61
TARDBP-216ENST00000614494 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
TARDBP-216ENST00000614494 SOCS7O14512 581 aa11.23□□□□□ -0.61
TARDBP-216ENST00000614494 CEP152O94986 1710 aa11.23□□□□□ -0.61
TARDBP-216ENST00000614494 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.61
TARDBP-216ENST00000614494 EFCAB6Q5THR3 1501 aa11.2□□□□□ -0.62
TARDBP-216ENST00000614494 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
TARDBP-216ENST00000614494 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
TARDBP-216ENST00000614494 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
TARDBP-216ENST00000614494 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
TARDBP-216ENST00000614494 TXNDC2Q86VQ3 553 aa11.18□□□□□ -0.62
TARDBP-216ENST00000614494 LRRC7Q96NW7 1537 aa11.18□□□□□ -0.62
TARDBP-216ENST00000614494 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
TARDBP-216ENST00000614494 ADGRB3O60242 1522 aa11.17□□□□□ -0.62
TARDBP-216ENST00000614494 NOS1P29475 1434 aa11.17□□□□□ -0.62
TARDBP-216ENST00000614494 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
TARDBP-216ENST00000614494 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
TARDBP-216ENST00000614494 NKTRP30414 1462 aaKnown RBP11.16□□□□□ -0.62
TARDBP-216ENST00000614494 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
TARDBP-216ENST00000614494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.621e-9■■□□□ 12.9
TARDBP-216ENST00000614494 HSPA1LP34931 641 aa11.14□□□□□ -0.63
TARDBP-216ENST00000614494 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
TARDBP-216ENST00000614494 TET3O43151 1660 aa11.14□□□□□ -0.63
TARDBP-216ENST00000614494 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
TARDBP-216ENST00000614494 UNC13BO14795 1591 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms