RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
GGA3-221ENST00000614198 ARAP3Q8WWN8 1544 aa14.04□□□□□ -0.16
GGA3-221ENST00000614198 BCANQ96GW7 911 aa14.04□□□□□ -0.16
GGA3-221ENST00000614198 MAP3K4Q9Y6R4 1608 aa14.03□□□□□ -0.16
GGA3-221ENST00000614198 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
GGA3-221ENST00000614198 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
GGA3-221ENST00000614198 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.16
GGA3-221ENST00000614198 POGZQ7Z3K3 1410 aa14.02□□□□□ -0.17
GGA3-221ENST00000614198 INO80Q9ULG1 1556 aaPredicted RBP14.01□□□□□ -0.17
GGA3-221ENST00000614198 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
GGA3-221ENST00000614198 CFAP65Q6ZU64 1925 aaKnown RBP14.01□□□□□ -0.17
GGA3-221ENST00000614198 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
GGA3-221ENST00000614198 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
GGA3-221ENST00000614198 COL17A1Q9UMD9 1497 aaPredicted RBP14□□□□□ -0.17
GGA3-221ENST00000614198 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
GGA3-221ENST00000614198 PPRC1Q5VV67 1664 aaKnown RBP13.99□□□□□ -0.17
GGA3-221ENST00000614198 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
GGA3-221ENST00000614198 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
GGA3-221ENST00000614198 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
GGA3-221ENST00000614198 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
GGA3-221ENST00000614198 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
GGA3-221ENST00000614198 ERBINQ96RT1 1412 aa13.97□□□□□ -0.17
GGA3-221ENST00000614198 MLECQ14165 292 aa13.97□□□□□ -0.17
GGA3-221ENST00000614198 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
GGA3-221ENST00000614198 UNC13BO14795 1591 aa13.96□□□□□ -0.17
GGA3-221ENST00000614198 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.18
GGA3-221ENST00000614198 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.18
GGA3-221ENST00000614198 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.18
GGA3-221ENST00000614198 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
GGA3-221ENST00000614198 RICTORQ6R327 1708 aa13.94□□□□□ -0.18
GGA3-221ENST00000614198 A2MP01023 1474 aa13.94□□□□□ -0.18
GGA3-221ENST00000614198 KDM5CP41229 1560 aa13.94□□□□□ -0.18
GGA3-221ENST00000614198 NEO1Q92859 1461 aa13.94□□□□□ -0.18
GGA3-221ENST00000614198 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
GGA3-221ENST00000614198 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
GGA3-221ENST00000614198 GLI2P10070 1586 aa13.93□□□□□ -0.18
GGA3-221ENST00000614198 HECW2Q9P2P5 1572 aa13.93□□□□□ -0.18
GGA3-221ENST00000614198 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
GGA3-221ENST00000614198 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
GGA3-221ENST00000614198 MROH1Q8NDA8 1641 aa13.92□□□□□ -0.18
GGA3-221ENST00000614198 E9PCH4 1651 aa13.92□□□□□ -0.18
GGA3-221ENST00000614198 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
GGA3-221ENST00000614198 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
GGA3-221ENST00000614198 MLH3Q9UHC1 1453 aa13.9□□□□□ -0.18
GGA3-221ENST00000614198 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
GGA3-221ENST00000614198 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
GGA3-221ENST00000614198 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
GGA3-221ENST00000614198 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.19
GGA3-221ENST00000614198 CEP152O94986 1710 aa13.89□□□□□ -0.19
GGA3-221ENST00000614198 SIGLEC1Q9BZZ2 1709 aa13.89□□□□□ -0.19
GGA3-221ENST00000614198 DIP2CQ9Y2E4 1556 aa13.89□□□□□ -0.19
GGA3-221ENST00000614198 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
GGA3-221ENST00000614198 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
GGA3-221ENST00000614198 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
GGA3-221ENST00000614198 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
GGA3-221ENST00000614198 ATP10AO60312 1499 aa13.87□□□□□ -0.19
GGA3-221ENST00000614198 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
GGA3-221ENST00000614198 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
GGA3-221ENST00000614198 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
GGA3-221ENST00000614198 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
GGA3-221ENST00000614198 KANK1Q14678 1352 aa13.85□□□□□ -0.19
GGA3-221ENST00000614198 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
GGA3-221ENST00000614198 PRDM15P57071 1507 aaPredicted RBP13.84□□□□□ -0.19
GGA3-221ENST00000614198 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
GGA3-221ENST00000614198 NPATQ14207 1427 aa13.82□□□□□ -0.2
GGA3-221ENST00000614198 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
GGA3-221ENST00000614198 VWDEQ8N2E2 1590 aa13.81□□□□□ -0.2
GGA3-221ENST00000614198 ARID4BQ4LE39 1312 aaPredicted RBP13.81□□□□□ -0.2
GGA3-221ENST00000614198 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
GGA3-221ENST00000614198 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
GGA3-221ENST00000614198 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
GGA3-221ENST00000614198 TET3O43151 1660 aa13.8□□□□□ -0.2
GGA3-221ENST00000614198 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
GGA3-221ENST00000614198 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
GGA3-221ENST00000614198 FKBP8Q14318 412 aa13.79□□□□□ -0.2
GGA3-221ENST00000614198 NEFLP07196 543 aa13.78□□□□□ -0.2
GGA3-221ENST00000614198 ABCC3O15438 1527 aa13.78□□□□□ -0.2
GGA3-221ENST00000614198 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
GGA3-221ENST00000614198 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
GGA3-221ENST00000614198 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
GGA3-221ENST00000614198 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
GGA3-221ENST00000614198 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
GGA3-221ENST00000614198 PTPRTO14522 1441 aa13.76□□□□□ -0.21
GGA3-221ENST00000614198 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
GGA3-221ENST00000614198 ROCK2O75116 1388 aaKnown RBP13.75□□□□□ -0.21
GGA3-221ENST00000614198 USP47Q96K76 1375 aa13.75□□□□□ -0.21
GGA3-221ENST00000614198 TRPM2O94759 1503 aa13.75□□□□□ -0.21
GGA3-221ENST00000614198 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
GGA3-221ENST00000614198 IDI1Q13907 227 aa13.74□□□□□ -0.21
GGA3-221ENST00000614198 PRAG1Q86YV5 1406 aa13.74□□□□□ -0.21
GGA3-221ENST00000614198 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
GGA3-221ENST00000614198 MROH2AA6NES4 1674 aa13.74□□□□□ -0.21
GGA3-221ENST00000614198 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
GGA3-221ENST00000614198 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
GGA3-221ENST00000614198 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
GGA3-221ENST00000614198 MSH5O43196 834 aa13.71□□□□□ -0.21
GGA3-221ENST00000614198 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
GGA3-221ENST00000614198 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
GGA3-221ENST00000614198 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
GGA3-221ENST00000614198 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms