RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 UNC13BO14795 1591 aa15.44■□□□□ 0.06
ATF3-211ENST00000613954 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
ATF3-211ENST00000613954 PKD2Q13563 968 aa15.43■□□□□ 0.06
ATF3-211ENST00000613954 RPRD2Q5VT52 1461 aaKnown RBP15.43■□□□□ 0.06
ATF3-211ENST00000613954 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
ATF3-211ENST00000613954 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
ATF3-211ENST00000613954 FAM135AQ9P2D6 1515 aa15.41■□□□□ 0.06
ATF3-211ENST00000613954 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
ATF3-211ENST00000613954 GLI2P10070 1586 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 ZNF518AQ6AHZ1 1483 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 CNTLNQ9NXG0 1405 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 EIF4G2P78344 907 aaKnown RBP eCLIP15.39■□□□□ 0.05
ATF3-211ENST00000613954 MAGI2Q86UL8 1455 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 NEO1Q92859 1461 aa15.39■□□□□ 0.05
ATF3-211ENST00000613954 IQGAP3Q86VI3 1631 aa15.38■□□□□ 0.05
ATF3-211ENST00000613954 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
ATF3-211ENST00000613954 MAP3K4Q9Y6R4 1608 aa15.37■□□□□ 0.05
ATF3-211ENST00000613954 PPP4R2Q9NY27 417 aa15.36■□□□□ 0.05
ATF3-211ENST00000613954 POGZQ7Z3K3 1410 aa15.36■□□□□ 0.05
ATF3-211ENST00000613954 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
ATF3-211ENST00000613954 L3MBTL2Q969R5 705 aa15.35■□□□□ 0.05
ATF3-211ENST00000613954 KDM5CP41229 1560 aa15.35■□□□□ 0.05
ATF3-211ENST00000613954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
ATF3-211ENST00000613954 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
ATF3-211ENST00000613954 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.04
ATF3-211ENST00000613954 MSH5O43196 834 aa15.33■□□□□ 0.04
ATF3-211ENST00000613954 ERICH6Q7L0X2 663 aa15.33■□□□□ 0.04
ATF3-211ENST00000613954 DHX29Q7Z478 1369 aaKnown RBP15.33■□□□□ 0.04
ATF3-211ENST00000613954 EIF2AK4Q9P2K8 1649 aaKnown RBP15.32■□□□□ 0.04
ATF3-211ENST00000613954 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
ATF3-211ENST00000613954 MLH3Q9UHC1 1453 aa15.32■□□□□ 0.04
ATF3-211ENST00000613954 DEPDC5O75140 1603 aa15.31■□□□□ 0.04
ATF3-211ENST00000613954 POLR1AO95602 1720 aaPredicted RBP15.31■□□□□ 0.04
ATF3-211ENST00000613954 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
ATF3-211ENST00000613954 HECW2Q9P2P5 1572 aa15.3■□□□□ 0.04
ATF3-211ENST00000613954 CCDC7Q96M83 1385 aa15.3■□□□□ 0.04
ATF3-211ENST00000613954 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
ATF3-211ENST00000613954 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
ATF3-211ENST00000613954 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
ATF3-211ENST00000613954 KANK1Q14678 1352 aa15.27■□□□□ 0.03
ATF3-211ENST00000613954 A2MP01023 1474 aa15.27■□□□□ 0.03
ATF3-211ENST00000613954 ATP10AO60312 1499 aa15.26■□□□□ 0.03
ATF3-211ENST00000613954 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
ATF3-211ENST00000613954 KIF3BO15066 747 aa15.26■□□□□ 0.03
ATF3-211ENST00000613954 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
ATF3-211ENST00000613954 PRDM15P57071 1507 aaPredicted RBP15.26■□□□□ 0.03
ATF3-211ENST00000613954 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
ATF3-211ENST00000613954 RICTORQ6R327 1708 aa15.25■□□□□ 0.03
ATF3-211ENST00000613954 MRS2Q9HD23 443 aa15.24■□□□□ 0.03
ATF3-211ENST00000613954 TET3O43151 1660 aa15.24■□□□□ 0.03
ATF3-211ENST00000613954 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
ATF3-211ENST00000613954 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
ATF3-211ENST00000613954 ABCA6Q8N139 1617 aa15.24■□□□□ 0.03
ATF3-211ENST00000613954 MROH1Q8NDA8 1641 aa15.24■□□□□ 0.03
ATF3-211ENST00000613954 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
ATF3-211ENST00000613954 E9PCH4 1651 aa15.23■□□□□ 0.03
ATF3-211ENST00000613954 RNF17Q9BXT8 1623 aaKnown RBP15.23■□□□□ 0.03
ATF3-211ENST00000613954 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
ATF3-211ENST00000613954 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
ATF3-211ENST00000613954 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.03
ATF3-211ENST00000613954 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
ATF3-211ENST00000613954 CCDC184Q52MB2 194 aa15.21■□□□□ 0.02
ATF3-211ENST00000613954 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
ATF3-211ENST00000613954 SPATA31E1Q6ZUB1 1445 aa15.2■□□□□ 0.02
ATF3-211ENST00000613954 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
ATF3-211ENST00000613954 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
ATF3-211ENST00000613954 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
ATF3-211ENST00000613954 PTPRTO14522 1441 aa15.18■□□□□ 0.02
ATF3-211ENST00000613954 TRPM2O94759 1503 aa15.18■□□□□ 0.02
ATF3-211ENST00000613954 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
ATF3-211ENST00000613954 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
ATF3-211ENST00000613954 KIF13AQ9H1H9 1805 aa15.17■□□□□ 0.02
ATF3-211ENST00000613954 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
ATF3-211ENST00000613954 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
ATF3-211ENST00000613954 SMG6Q86US8 1419 aaKnown RBP15.17■□□□□ 0.02
ATF3-211ENST00000613954 EFCAB6Q5THR3 1501 aa15.16■□□□□ 0.02
ATF3-211ENST00000613954 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
ATF3-211ENST00000613954 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
ATF3-211ENST00000613954 RALGAPBQ86X10 1494 aa15.15■□□□□ 0.02
ATF3-211ENST00000613954 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
ATF3-211ENST00000613954 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
ATF3-211ENST00000613954 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
ATF3-211ENST00000613954 CEP152O94986 1710 aa15.13■□□□□ 0.01
ATF3-211ENST00000613954 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
ATF3-211ENST00000613954 CLTCL1P53675 1640 aa15.11■□□□□ 0.01
ATF3-211ENST00000613954 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
ATF3-211ENST00000613954 GGT6Q6P531 493 aa15.11■□□□□ 0.01
ATF3-211ENST00000613954 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
ATF3-211ENST00000613954 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
ATF3-211ENST00000613954 PRAG1Q86YV5 1406 aa15.1■□□□□ 0.01
ATF3-211ENST00000613954 ABCC3O15438 1527 aa15.1■□□□□ 0.01
ATF3-211ENST00000613954 PRKCSHP14314 528 aaPredicted RBP15.1■□□□□ 0.01
ATF3-211ENST00000613954 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
ATF3-211ENST00000613954 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
ATF3-211ENST00000613954 WASHC2CQ9Y4E1 1318 aa15.08■□□□□ 0
ATF3-211ENST00000613954 REREQ9P2R6 1566 aa15.08■□□□□ 0
ATF3-211ENST00000613954 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
ATF3-211ENST00000613954 USP47Q96K76 1375 aa15.07■□□□□ 0
ATF3-211ENST00000613954 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms