RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 MPHOSPH9Q99550 1183 aa29.79■■■□□ 2.36
CPNE9-205ENST00000613455 ZEB1P37275 1124 aaPredicted RBP29.78■■■□□ 2.36
CPNE9-205ENST00000613455 NUP155O75694 1391 aa29.77■■■□□ 2.36
CPNE9-205ENST00000613455 IQGAP3Q86VI3 1631 aa29.74■■■□□ 2.35
CPNE9-205ENST00000613455 BCORL1Q5H9F3 1711 aa29.74■■■□□ 2.35
CPNE9-205ENST00000613455 FAM135AQ9P2D6 1515 aa29.74■■■□□ 2.35
CPNE9-205ENST00000613455 MROH1Q8NDA8 1641 aa29.72■■■□□ 2.35
CPNE9-205ENST00000613455 SLC4A1APQ9BWU0 796 aaKnown RBP29.72■■■□□ 2.35
CPNE9-205ENST00000613455 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
CPNE9-205ENST00000613455 ARHGEF40Q8TER5 1519 aa29.71■■■□□ 2.35
CPNE9-205ENST00000613455 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
CPNE9-205ENST00000613455 KIF3BO15066 747 aa29.68■■■□□ 2.34
CPNE9-205ENST00000613455 REREQ9P2R6 1566 aa29.67■■■□□ 2.34
CPNE9-205ENST00000613455 VWDEQ8N2E2 1590 aa29.67■■■□□ 2.34
CPNE9-205ENST00000613455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.66■■■□□ 2.34
CPNE9-205ENST00000613455 ATP10AO60312 1499 aa29.66■■■□□ 2.34
CPNE9-205ENST00000613455 FOXD1Q16676 465 aa29.64■■■□□ 2.34
CPNE9-205ENST00000613455 PKD2Q13563 968 aa29.61■■■□□ 2.33
CPNE9-205ENST00000613455 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
CPNE9-205ENST00000613455 SIN3AQ96ST3 1273 aa29.59■■■□□ 2.33
CPNE9-205ENST00000613455 ANKRD30BQ9BXX2 1392 aa29.59■■■□□ 2.33
CPNE9-205ENST00000613455 AGLP35573 1532 aa29.56■■■□□ 2.32
CPNE9-205ENST00000613455 TET3O43151 1660 aa29.55■■■□□ 2.32
CPNE9-205ENST00000613455 KANK1Q14678 1352 aa29.55■■■□□ 2.32
CPNE9-205ENST00000613455 CEP152O94986 1710 aa29.53■■■□□ 2.32
CPNE9-205ENST00000613455 E9PCH4 1651 aa29.52■■■□□ 2.32
CPNE9-205ENST00000613455 LMTK2Q8IWU2 1503 aa29.52■■■□□ 2.32
CPNE9-205ENST00000613455 NEUROD1Q13562 356 aa29.5■■■□□ 2.31
CPNE9-205ENST00000613455 GGT6Q6P531 493 aa29.48■■■□□ 2.31
CPNE9-205ENST00000613455 ABCC3O15438 1527 aa29.48■■■□□ 2.31
CPNE9-205ENST00000613455 EFCAB6Q5THR3 1501 aa29.48■■■□□ 2.31
CPNE9-205ENST00000613455 ZC3H13Q5T200 1668 aaKnown RBP29.45■■■□□ 2.3
CPNE9-205ENST00000613455 RPRD2Q5VT52 1461 aaKnown RBP29.45■■■□□ 2.3
CPNE9-205ENST00000613455 PLA2R1Q13018 1463 aa29.43■■■□□ 2.3
CPNE9-205ENST00000613455 CAMSAP1Q5T5Y3 1602 aa29.4■■■□□ 2.3
CPNE9-205ENST00000613455 SPHKAPQ2M3C7 1700 aa29.39■■■□□ 2.29
CPNE9-205ENST00000613455 WASHC2CQ9Y4E1 1318 aa29.37■■■□□ 2.29
CPNE9-205ENST00000613455 TIMELESSQ9UNS1 1208 aa29.37■■■□□ 2.29
CPNE9-205ENST00000613455 PTPRTO14522 1441 aa29.36■■■□□ 2.29
CPNE9-205ENST00000613455 TONSLQ96HA7 1378 aa29.35■■■□□ 2.29
CPNE9-205ENST00000613455 TRPM2O94759 1503 aa29.35■■■□□ 2.29
CPNE9-205ENST00000613455 NPATQ14207 1427 aa29.34■■■□□ 2.29
CPNE9-205ENST00000613455 CCDC144AA2RUR9 1427 aa29.31■■■□□ 2.28
CPNE9-205ENST00000613455 PPP6R1Q9UPN7 881 aa29.29■■■□□ 2.28
CPNE9-205ENST00000613455 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
CPNE9-205ENST00000613455 CLTCQ00610 1675 aaKnown RBP29.28■■■□□ 2.28
CPNE9-205ENST00000613455 CLTCL1P53675 1640 aa29.26■■■□□ 2.28
CPNE9-205ENST00000613455 MLECQ14165 292 aa29.26■■■□□ 2.27
CPNE9-205ENST00000613455 ARID4BQ4LE39 1312 aaPredicted RBP29.25■■■□□ 2.27
CPNE9-205ENST00000613455 CFAP65Q6ZU64 1925 aaKnown RBP29.24■■■□□ 2.27
CPNE9-205ENST00000613455 L3MBTL2Q969R5 705 aa29.21■■■□□ 2.27
CPNE9-205ENST00000613455 NOS1P29475 1434 aa29.2■■■□□ 2.27
CPNE9-205ENST00000613455 PPP1R15AO75807 674 aaPredicted RBP29.2■■■□□ 2.27
CPNE9-205ENST00000613455 UGGT1Q9NYU2 1555 aa29.2■■■□□ 2.26
CPNE9-205ENST00000613455 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.26
CPNE9-205ENST00000613455 PREX1Q8TCU6 1659 aa29.19■■■□□ 2.26
CPNE9-205ENST00000613455 SYNMO15061 1565 aa29.18■■■□□ 2.26
CPNE9-205ENST00000613455 SPATA31E1Q6ZUB1 1445 aa29.14■■■□□ 2.26
CPNE9-205ENST00000613455 PIK3C2BO00750 1634 aa29.13■■■□□ 2.25
CPNE9-205ENST00000613455 MROH2AA6NES4 1674 aa29.13■■■□□ 2.25
CPNE9-205ENST00000613455 ERVK-7P63135 1459 aa29.12■■■□□ 2.25
CPNE9-205ENST00000613455 NEURL4Q96JN8 1562 aa29.11■■■□□ 2.25
CPNE9-205ENST00000613455 FER1L4A9Z1Z3 1794 aa29.11■■■□□ 2.25
CPNE9-205ENST00000613455 KIF1BO60333 1816 aa29.1■■■□□ 2.25
CPNE9-205ENST00000613455 SPATA31D1Q6ZQQ2 1576 aa29.09■■■□□ 2.25
CPNE9-205ENST00000613455 ZMYM3Q14202 1370 aa29.08■■■□□ 2.25
CPNE9-205ENST00000613455 ESF1Q9H501 851 aaKnown RBP29.08■■■□□ 2.25
CPNE9-205ENST00000613455 FBXO31Q5XUX0 539 aaPredicted RBP29.06■■■□□ 2.24
CPNE9-205ENST00000613455 ADGRB3O60242 1522 aa29.05■■■□□ 2.24
CPNE9-205ENST00000613455 RGL3Q3MIN7 710 aa29.03■■■□□ 2.24
CPNE9-205ENST00000613455 UHRF1BP1Q6BDS2 1440 aa29.01■■■□□ 2.23
CPNE9-205ENST00000613455 NBPF8Q3BBV2 869 aa29■■■□□ 2.23
CPNE9-205ENST00000613455 MADDQ8WXG6 1647 aa29■■■□□ 2.23
CPNE9-205ENST00000613455 C3P01024 1663 aa28.99■■■□□ 2.23
CPNE9-205ENST00000613455 DCAF11Q8TEB1 546 aa28.99■■■□□ 2.23
CPNE9-205ENST00000613455 ADAMTSL3P82987 1691 aa28.99■■■□□ 2.23
CPNE9-205ENST00000613455 SLC52A1Q9NWF4 448 aa28.97■■■□□ 2.23
CPNE9-205ENST00000613455 IFT172Q9UG01 1749 aa28.97■■■□□ 2.23
CPNE9-205ENST00000613455 IDI1Q13907 227 aa28.96■■■□□ 2.23
CPNE9-205ENST00000613455 KDM2AQ9Y2K7 1162 aa28.94■■■□□ 2.22
CPNE9-205ENST00000613455 PRAG1Q86YV5 1406 aa28.93■■■□□ 2.22
CPNE9-205ENST00000613455 TMEM131LA2VDJ0 1609 aa28.93■■■□□ 2.22
CPNE9-205ENST00000613455 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
CPNE9-205ENST00000613455 MYO5BQ9ULV0 1848 aa28.92■■■□□ 2.22
CPNE9-205ENST00000613455 PPLO60437 1756 aa28.89■■■□□ 2.22
CPNE9-205ENST00000613455 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
CPNE9-205ENST00000613455 CHGAP10645 457 aaKnown RBP28.89■■■□□ 2.21
CPNE9-205ENST00000613455 TNRQ92752 1358 aa28.88■■■□□ 2.21
CPNE9-205ENST00000613455 RALGAPBQ86X10 1494 aa28.88■■■□□ 2.21
CPNE9-205ENST00000613455 MYOM2P54296 1465 aa28.87■■■□□ 2.21
CPNE9-205ENST00000613455 CEBPAP49715 358 aaPredicted RBP28.87■■■□□ 2.21
CPNE9-205ENST00000613455 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
CPNE9-205ENST00000613455 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
CPNE9-205ENST00000613455 STAC3Q96MF2 364 aa28.83■■■□□ 2.21
CPNE9-205ENST00000613455 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
CPNE9-205ENST00000613455 RPGRIP1LQ68CZ1 1315 aa28.81■■■□□ 2.2
CPNE9-205ENST00000613455 ZNF316A6NFI3 1004 aaPredicted RBP28.8■■■□□ 2.2
CPNE9-205ENST00000613455 A2ML1A8K2U0 1454 aa28.8■■■□□ 2.2
CPNE9-205ENST00000613455 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
CPNE9-205ENST00000613455 NLRP1Q9C000 1473 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms