RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 EIF2AK4Q9P2K8 1649 aaKnown RBP18.95■□□□□ 0.62
CBWD1-221ENST00000613355 ABCC5O15440 1437 aa18.93■□□□□ 0.62
CBWD1-221ENST00000613355 NPATQ14207 1427 aa18.93■□□□□ 0.62
CBWD1-221ENST00000613355 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
CBWD1-221ENST00000613355 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
CBWD1-221ENST00000613355 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
CBWD1-221ENST00000613355 KIF15Q9NS87 1388 aa18.92■□□□□ 0.62
CBWD1-221ENST00000613355 HSPA2P54652 639 aa18.91■□□□□ 0.62
CBWD1-221ENST00000613355 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
CBWD1-221ENST00000613355 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
CBWD1-221ENST00000613355 ERBINQ96RT1 1412 aa18.89■□□□□ 0.61
CBWD1-221ENST00000613355 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
CBWD1-221ENST00000613355 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
CBWD1-221ENST00000613355 KANK1Q14678 1352 aa18.86■□□□□ 0.61
CBWD1-221ENST00000613355 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
CBWD1-221ENST00000613355 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.61
CBWD1-221ENST00000613355 PTPRKQ15262 1439 aa18.83■□□□□ 0.6
CBWD1-221ENST00000613355 PZPP20742 1482 aa18.83■□□□□ 0.6
CBWD1-221ENST00000613355 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
CBWD1-221ENST00000613355 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
CBWD1-221ENST00000613355 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
CBWD1-221ENST00000613355 TNRQ92752 1358 aa18.79■□□□□ 0.6
CBWD1-221ENST00000613355 ABCC3O15438 1527 aa18.79■□□□□ 0.6
CBWD1-221ENST00000613355 ZNF142P52746 1687 aaPredicted RBP18.79■□□□□ 0.6
CBWD1-221ENST00000613355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
CBWD1-221ENST00000613355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
CBWD1-221ENST00000613355 CEP170BQ9Y4F5 1589 aaPredicted RBP18.78■□□□□ 0.6
CBWD1-221ENST00000613355 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
CBWD1-221ENST00000613355 CEP152O94986 1710 aa18.78■□□□□ 0.6
CBWD1-221ENST00000613355 CAMSAP1Q5T5Y3 1602 aa18.77■□□□□ 0.59
CBWD1-221ENST00000613355 ITGAEP38570 1179 aa18.76■□□□□ 0.59
CBWD1-221ENST00000613355 DEPDC5O75140 1603 aa18.75■□□□□ 0.59
CBWD1-221ENST00000613355 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
CBWD1-221ENST00000613355 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
CBWD1-221ENST00000613355 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
CBWD1-221ENST00000613355 ROCK1Q13464 1354 aa18.73■□□□□ 0.59
CBWD1-221ENST00000613355 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
CBWD1-221ENST00000613355 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
CBWD1-221ENST00000613355 STRCQ7RTU9 1775 aa18.72■□□□□ 0.59
CBWD1-221ENST00000613355 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
CBWD1-221ENST00000613355 PKD2Q13563 968 aa18.71■□□□□ 0.59
CBWD1-221ENST00000613355 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
CBWD1-221ENST00000613355 PTPRTO14522 1441 aa18.69■□□□□ 0.58
CBWD1-221ENST00000613355 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
CBWD1-221ENST00000613355 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
CBWD1-221ENST00000613355 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
CBWD1-221ENST00000613355 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
CBWD1-221ENST00000613355 RRBP1Q9P2E9 1410 aaKnown RBP18.68■□□□□ 0.58
CBWD1-221ENST00000613355 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
CBWD1-221ENST00000613355 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
CBWD1-221ENST00000613355 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
CBWD1-221ENST00000613355 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
CBWD1-221ENST00000613355 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
CBWD1-221ENST00000613355 VWDEQ8N2E2 1590 aa18.63■□□□□ 0.57
CBWD1-221ENST00000613355 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
CBWD1-221ENST00000613355 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
CBWD1-221ENST00000613355 UNC13BO14795 1591 aa18.61■□□□□ 0.57
CBWD1-221ENST00000613355 RPRD2Q5VT52 1461 aaKnown RBP18.61■□□□□ 0.57
CBWD1-221ENST00000613355 TET3O43151 1660 aa18.6■□□□□ 0.57
CBWD1-221ENST00000613355 GCC2Q8IWJ2 1684 aa18.59■□□□□ 0.57
CBWD1-221ENST00000613355 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
CBWD1-221ENST00000613355 FBXO41Q8TF61 875 aa18.57■□□□□ 0.56
CBWD1-221ENST00000613355 NUP155O75694 1391 aa18.57■□□□□ 0.56
CBWD1-221ENST00000613355 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
CBWD1-221ENST00000613355 UBR1Q8IWV7 1749 aa18.56■□□□□ 0.56
CBWD1-221ENST00000613355 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
CBWD1-221ENST00000613355 IQGAP3Q86VI3 1631 aa18.55■□□□□ 0.56
CBWD1-221ENST00000613355 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
CBWD1-221ENST00000613355 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
CBWD1-221ENST00000613355 PIK3C2BO00750 1634 aa18.53■□□□□ 0.56
CBWD1-221ENST00000613355 NOS1P29475 1434 aa18.52■□□□□ 0.55
CBWD1-221ENST00000613355 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
CBWD1-221ENST00000613355 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
CBWD1-221ENST00000613355 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
CBWD1-221ENST00000613355 SYNMO15061 1565 aa18.49■□□□□ 0.55
CBWD1-221ENST00000613355 IDI1Q13907 227 aa18.49■□□□□ 0.55
CBWD1-221ENST00000613355 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
CBWD1-221ENST00000613355 HFM1A2PYH4 1435 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 NAIPQ13075 1403 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 MED14O60244 1454 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
CBWD1-221ENST00000613355 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 E9PCH4 1651 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 SLIT1O75093 1534 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
CBWD1-221ENST00000613355 ADGRB3O60242 1522 aa18.47■□□□□ 0.55
CBWD1-221ENST00000613355 IQSEC2Q5JU85 1478 aa18.47■□□□□ 0.55
CBWD1-221ENST00000613355 ZNF335Q9H4Z2 1342 aaPredicted RBP18.46■□□□□ 0.55
CBWD1-221ENST00000613355 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
CBWD1-221ENST00000613355 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
CBWD1-221ENST00000613355 CHGAP10645 457 aaKnown RBP18.45■□□□□ 0.54
CBWD1-221ENST00000613355 ARHGAP23Q9P227 1491 aa18.45■□□□□ 0.54
CBWD1-221ENST00000613355 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
CBWD1-221ENST00000613355 CPS1P31327 1500 aa18.43■□□□□ 0.54
CBWD1-221ENST00000613355 BCANQ96GW7 911 aa18.43■□□□□ 0.54
CBWD1-221ENST00000613355 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
CBWD1-221ENST00000613355 SPHKAPQ2M3C7 1700 aa18.41■□□□□ 0.54
CBWD1-221ENST00000613355 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
CBWD1-221ENST00000613355 LTKP29376 864 aa18.38■□□□□ 0.53
CBWD1-221ENST00000613355 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms