RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
TSKU-205ENST00000612930 FAM43AQ8N2R8 423 aa21.73■■□□□ 1.07
TSKU-205ENST00000612930 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
TSKU-205ENST00000612930 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
TSKU-205ENST00000612930 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
TSKU-205ENST00000612930 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
TSKU-205ENST00000612930 ADGBQ8N7X0 1667 aa21.71■■□□□ 1.07
TSKU-205ENST00000612930 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.06
TSKU-205ENST00000612930 CENPQQ7L2Z9 268 aaPredicted RBP21.7■■□□□ 1.06
TSKU-205ENST00000612930 PER1O15534 1290 aaPredicted RBP21.69■■□□□ 1.06
TSKU-205ENST00000612930 KDM2AQ9Y2K7 1162 aa21.68■■□□□ 1.06
TSKU-205ENST00000612930 KIAA0586Q9BVV6 1533 aa21.68■■□□□ 1.06
TSKU-205ENST00000612930 INSRP06213 1382 aa21.67■■□□□ 1.06
TSKU-205ENST00000612930 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
TSKU-205ENST00000612930 ADGRL2O95490 1459 aa21.65■■□□□ 1.06
TSKU-205ENST00000612930 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
TSKU-205ENST00000612930 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
TSKU-205ENST00000612930 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
TSKU-205ENST00000612930 NUP153P49790 1475 aaKnown RBP21.61■■□□□ 1.05
TSKU-205ENST00000612930 CROCC2H7BZ55 1655 aa21.61■■□□□ 1.05
TSKU-205ENST00000612930 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
TSKU-205ENST00000612930 ANKRD50Q9ULJ7 1429 aa21.59■■□□□ 1.05
TSKU-205ENST00000612930 CFDP1Q9UEE9 299 aaPredicted RBP21.59■■□□□ 1.05
TSKU-205ENST00000612930 RGS3P49796 1198 aa21.58■■□□□ 1.05
TSKU-205ENST00000612930 NUP155O75694 1391 aa21.57■■□□□ 1.04
TSKU-205ENST00000612930 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
TSKU-205ENST00000612930 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
TSKU-205ENST00000612930 POGKQ9P215 609 aa21.56■■□□□ 1.04
TSKU-205ENST00000612930 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
TSKU-205ENST00000612930 RRAGDQ9NQL2 400 aaPredicted RBP21.55■■□□□ 1.04
TSKU-205ENST00000612930 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
TSKU-205ENST00000612930 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
TSKU-205ENST00000612930 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
TSKU-205ENST00000612930 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
TSKU-205ENST00000612930 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
TSKU-205ENST00000612930 ITSN2Q9NZM3 1697 aa21.54■■□□□ 1.04
TSKU-205ENST00000612930 USP19O94966 1318 aa21.53■■□□□ 1.04
TSKU-205ENST00000612930 TRPM1Q7Z4N2 1603 aa21.53■■□□□ 1.04
TSKU-205ENST00000612930 ADAMTS8Q9UP79 889 aa21.53■■□□□ 1.04
TSKU-205ENST00000612930 PLEKHH1Q9ULM0 1364 aa21.53■■□□□ 1.04
TSKU-205ENST00000612930 RAPGEF6Q8TEU7 1601 aa21.51■■□□□ 1.03
TSKU-205ENST00000612930 KDM5DQ9BY66 1539 aa21.51■■□□□ 1.03
TSKU-205ENST00000612930 VIRMAQ69YN4 1812 aaKnown RBP21.51■■□□□ 1.03
TSKU-205ENST00000612930 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
TSKU-205ENST00000612930 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
TSKU-205ENST00000612930 PANK3Q9H999 370 aa21.5■■□□□ 1.03
TSKU-205ENST00000612930 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
TSKU-205ENST00000612930 DISP3Q9P2K9 1392 aa21.49■■□□□ 1.03
TSKU-205ENST00000612930 NBPF1Q3BBV0 1214 aa21.49■■□□□ 1.03
TSKU-205ENST00000612930 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
TSKU-205ENST00000612930 KIAA0556O60303 1618 aa21.48■■□□□ 1.03
TSKU-205ENST00000612930 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
TSKU-205ENST00000612930 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
TSKU-205ENST00000612930 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
TSKU-205ENST00000612930 TESK2Q96S53 571 aa21.46■■□□□ 1.03
TSKU-205ENST00000612930 SEC24BO95487 1268 aa21.44■■□□□ 1.02
TSKU-205ENST00000612930 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
TSKU-205ENST00000612930 PTPRGP23470 1445 aa21.43■■□□□ 1.02
TSKU-205ENST00000612930 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
TSKU-205ENST00000612930 L1TD1Q5T7N2 865 aaKnown RBP21.42■■□□□ 1.02
TSKU-205ENST00000612930 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
TSKU-205ENST00000612930 IGHDP01880 384 aa21.41■■□□□ 1.02
TSKU-205ENST00000612930 SLKQ9H2G2 1235 aaPredicted RBP21.41■■□□□ 1.02
TSKU-205ENST00000612930 ADCY10Q96PN6 1610 aa21.41■■□□□ 1.02
TSKU-205ENST00000612930 SLFN5Q08AF3 891 aa21.41■■□□□ 1.02
TSKU-205ENST00000612930 CDC42BPAQ5VT25 1732 aa21.41■■□□□ 1.02
TSKU-205ENST00000612930 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
TSKU-205ENST00000612930 C9orf84Q5VXU9 1444 aa21.4■■□□□ 1.02
TSKU-205ENST00000612930 PRDM15P57071 1507 aaPredicted RBP21.4■■□□□ 1.02
TSKU-205ENST00000612930 ERBINQ96RT1 1412 aa21.39■■□□□ 1.01
TSKU-205ENST00000612930 ANTXR1Q9H6X2 564 aa21.39■■□□□ 1.01
TSKU-205ENST00000612930 NLRP1Q9C000 1473 aa21.38■■□□□ 1.01
TSKU-205ENST00000612930 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
TSKU-205ENST00000612930 BECN1Q14457 450 aa21.38■■□□□ 1.01
TSKU-205ENST00000612930 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
TSKU-205ENST00000612930 LAMC1P11047 1609 aa21.37■■□□□ 1.01
TSKU-205ENST00000612930 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
TSKU-205ENST00000612930 PPP2R1AP30153 589 aa21.37■■□□□ 1.01
TSKU-205ENST00000612930 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSKU-205ENST00000612930 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
TSKU-205ENST00000612930 RGL3Q3MIN7 710 aa21.36■■□□□ 1.01
TSKU-205ENST00000612930 BCAR3O75815 825 aa21.35■■□□□ 1.01
TSKU-205ENST00000612930 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
TSKU-205ENST00000612930 PKNOX2Q96KN3 472 aa21.35■■□□□ 1.01
TSKU-205ENST00000612930 XRCC6P12956 609 aaKnown RBP eCLIP21.34■■□□□ 1.01
TSKU-205ENST00000612930 TMF1P82094 1093 aa21.33■■□□□ 1.01
TSKU-205ENST00000612930 A2MP01023 1474 aa21.33■■□□□ 1.01
TSKU-205ENST00000612930 MAGI2Q86UL8 1455 aa21.33■■□□□ 1
TSKU-205ENST00000612930 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
TSKU-205ENST00000612930 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
TSKU-205ENST00000612930 NKTRP30414 1462 aaKnown RBP21.31■■□□□ 1
TSKU-205ENST00000612930 FSD2A1L4K1 749 aa21.3■■□□□ 1
TSKU-205ENST00000612930 PLB1Q6P1J6 1458 aa21.3■■□□□ 1
TSKU-205ENST00000612930 MAPK8IP3Q9UPT6 1336 aa21.3■■□□□ 1
TSKU-205ENST00000612930 ARXQ96QS3 562 aa21.3■■□□□ 1
TSKU-205ENST00000612930 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
TSKU-205ENST00000612930 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
TSKU-205ENST00000612930 TSPY4P0CV99 314 aa21.28■■□□□ 1
TSKU-205ENST00000612930 TSPY10P0CW01 314 aa21.28■■□□□ 1
TSKU-205ENST00000612930 CLCN1P35523 988 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms