RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
LINC00272-202ENST00000612603 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
LINC00272-202ENST00000612603 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
LINC00272-202ENST00000612603 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
LINC00272-202ENST00000612603 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
LINC00272-202ENST00000612603 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
LINC00272-202ENST00000612603 CEP152O94986 1710 aa18.05■□□□□ 0.48
LINC00272-202ENST00000612603 RNF17Q9BXT8 1623 aaKnown RBP18.05■□□□□ 0.48
LINC00272-202ENST00000612603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00272-202ENST00000612603 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
LINC00272-202ENST00000612603 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
LINC00272-202ENST00000612603 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
LINC00272-202ENST00000612603 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
LINC00272-202ENST00000612603 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
LINC00272-202ENST00000612603 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
LINC00272-202ENST00000612603 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
LINC00272-202ENST00000612603 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
LINC00272-202ENST00000612603 ROCK1Q13464 1354 aa17.98■□□□□ 0.47
LINC00272-202ENST00000612603 KANK1Q14678 1352 aa17.98■□□□□ 0.47
LINC00272-202ENST00000612603 ABCC3O15438 1527 aa17.98■□□□□ 0.47
LINC00272-202ENST00000612603 DEPDC5O75140 1603 aa17.97■□□□□ 0.47
LINC00272-202ENST00000612603 PRDM15P57071 1507 aaPredicted RBP17.97■□□□□ 0.47
LINC00272-202ENST00000612603 CAMSAP1Q5T5Y3 1602 aa17.96■□□□□ 0.47
LINC00272-202ENST00000612603 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
LINC00272-202ENST00000612603 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
LINC00272-202ENST00000612603 HSPA2P54652 639 aa17.95■□□□□ 0.46
LINC00272-202ENST00000612603 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
LINC00272-202ENST00000612603 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
LINC00272-202ENST00000612603 FBXO31Q5XUX0 539 aaPredicted RBP17.93■□□□□ 0.46
LINC00272-202ENST00000612603 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
LINC00272-202ENST00000612603 MYO3AQ8NEV4 1616 aa17.91■□□□□ 0.46
LINC00272-202ENST00000612603 PZPP20742 1482 aa17.91■□□□□ 0.46
LINC00272-202ENST00000612603 NPATQ14207 1427 aa17.9■□□□□ 0.46
LINC00272-202ENST00000612603 UNC13BO14795 1591 aa17.89■□□□□ 0.45
LINC00272-202ENST00000612603 TNRQ92752 1358 aa17.88■□□□□ 0.45
LINC00272-202ENST00000612603 NAIPQ13075 1403 aa17.87■□□□□ 0.45
LINC00272-202ENST00000612603 NUP155O75694 1391 aa17.86■□□□□ 0.45
LINC00272-202ENST00000612603 VWDEQ8N2E2 1590 aa17.86■□□□□ 0.45
LINC00272-202ENST00000612603 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
LINC00272-202ENST00000612603 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
LINC00272-202ENST00000612603 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
LINC00272-202ENST00000612603 TET3O43151 1660 aa17.83■□□□□ 0.45
LINC00272-202ENST00000612603 EFCAB6Q5THR3 1501 aa17.83■□□□□ 0.45
LINC00272-202ENST00000612603 HFM1A2PYH4 1435 aa17.83■□□□□ 0.45
LINC00272-202ENST00000612603 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
LINC00272-202ENST00000612603 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
LINC00272-202ENST00000612603 SPATA31D1Q6ZQQ2 1576 aa17.82■□□□□ 0.44
LINC00272-202ENST00000612603 LMTK2Q8IWU2 1503 aa17.82■□□□□ 0.44
LINC00272-202ENST00000612603 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
LINC00272-202ENST00000612603 E9PCH4 1651 aa17.79■□□□□ 0.44
LINC00272-202ENST00000612603 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
LINC00272-202ENST00000612603 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
LINC00272-202ENST00000612603 UGGT1Q9NYU2 1555 aa17.76■□□□□ 0.43
LINC00272-202ENST00000612603 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
LINC00272-202ENST00000612603 STRCQ7RTU9 1775 aa17.75■□□□□ 0.43
LINC00272-202ENST00000612603 SYNMO15061 1565 aa17.74■□□□□ 0.43
LINC00272-202ENST00000612603 PIK3C2BO00750 1634 aa17.74■□□□□ 0.43
LINC00272-202ENST00000612603 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
LINC00272-202ENST00000612603 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
LINC00272-202ENST00000612603 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
LINC00272-202ENST00000612603 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
LINC00272-202ENST00000612603 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
LINC00272-202ENST00000612603 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
LINC00272-202ENST00000612603 SPHKAPQ2M3C7 1700 aa17.7■□□□□ 0.42
LINC00272-202ENST00000612603 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
LINC00272-202ENST00000612603 NOS1P29475 1434 aa17.7■□□□□ 0.42
LINC00272-202ENST00000612603 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
LINC00272-202ENST00000612603 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
LINC00272-202ENST00000612603 IDI1Q13907 227 aa17.69■□□□□ 0.42
LINC00272-202ENST00000612603 MYO5BQ9ULV0 1848 aa17.68■□□□□ 0.42
LINC00272-202ENST00000612603 PKD2Q13563 968 aa17.68■□□□□ 0.42
LINC00272-202ENST00000612603 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
LINC00272-202ENST00000612603 FOXD1Q16676 465 aa17.66■□□□□ 0.42
LINC00272-202ENST00000612603 ANKLE2Q86XL3 938 aa17.65■□□□□ 0.42
LINC00272-202ENST00000612603 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
LINC00272-202ENST00000612603 SLC52A1Q9NWF4 448 aa17.65■□□□□ 0.42
LINC00272-202ENST00000612603 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
LINC00272-202ENST00000612603 ADGRB3O60242 1522 aa17.65■□□□□ 0.42
LINC00272-202ENST00000612603 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
LINC00272-202ENST00000612603 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
LINC00272-202ENST00000612603 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
LINC00272-202ENST00000612603 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
LINC00272-202ENST00000612603 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
LINC00272-202ENST00000612603 TMEM131LA2VDJ0 1609 aa17.59■□□□□ 0.41
LINC00272-202ENST00000612603 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
LINC00272-202ENST00000612603 BCANQ96GW7 911 aa17.59■□□□□ 0.41
LINC00272-202ENST00000612603 KIF1BO60333 1816 aa17.58■□□□□ 0.41
LINC00272-202ENST00000612603 IQGAP1P46940 1657 aa17.58■□□□□ 0.41
LINC00272-202ENST00000612603 TRPM2O94759 1503 aa17.58■□□□□ 0.41
LINC00272-202ENST00000612603 PTPRTO14522 1441 aa17.58■□□□□ 0.41
LINC00272-202ENST00000612603 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
LINC00272-202ENST00000612603 ZNF326Q5BKZ1 582 aaKnown RBP17.58■□□□□ 0.4
LINC00272-202ENST00000612603 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
LINC00272-202ENST00000612603 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
LINC00272-202ENST00000612603 NPHP4O75161 1426 aaPredicted RBP17.57■□□□□ 0.4
LINC00272-202ENST00000612603 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
LINC00272-202ENST00000612603 LTKP29376 864 aa17.57■□□□□ 0.4
LINC00272-202ENST00000612603 SLIT1O75093 1534 aa17.57■□□□□ 0.4
LINC00272-202ENST00000612603 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
LINC00272-202ENST00000612603 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms