RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 FOXD1Q16676 465 aa21.56■■□□□ 1.04
CIT-219ENST00000612548 DIP2CQ9Y2E4 1556 aa21.56■■□□□ 1.04
CIT-219ENST00000612548 MAGI2Q86UL8 1455 aa21.56■■□□□ 1.04
CIT-219ENST00000612548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.56■■□□□ 1.042e-8■■■□□ 17.2
CIT-219ENST00000612548 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
CIT-219ENST00000612548 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
CIT-219ENST00000612548 DEPDC5O75140 1603 aa21.54■■□□□ 1.04
CIT-219ENST00000612548 NEUROD1Q13562 356 aa21.53■■□□□ 1.04
CIT-219ENST00000612548 YEATS2Q9ULM3 1422 aa21.53■■□□□ 1.04
CIT-219ENST00000612548 COL17A1Q9UMD9 1497 aaPredicted RBP21.53■■□□□ 1.04
CIT-219ENST00000612548 PKD2Q13563 968 aa21.51■■□□□ 1.03
CIT-219ENST00000612548 KIF3BO15066 747 aa21.51■■□□□ 1.03
CIT-219ENST00000612548 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
CIT-219ENST00000612548 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
CIT-219ENST00000612548 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
CIT-219ENST00000612548 RNF17Q9BXT8 1623 aaKnown RBP21.47■■□□□ 1.03
CIT-219ENST00000612548 BCORL1Q5H9F3 1711 aa21.45■■□□□ 1.03
CIT-219ENST00000612548 KANK1Q14678 1352 aa21.43■■□□□ 1.02
CIT-219ENST00000612548 VWDEQ8N2E2 1590 aa21.43■■□□□ 1.02
CIT-219ENST00000612548 ARHGEF40Q8TER5 1519 aa21.42■■□□□ 1.02
CIT-219ENST00000612548 ATP10AO60312 1499 aa21.42■■□□□ 1.02
CIT-219ENST00000612548 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
CIT-219ENST00000612548 TET3O43151 1660 aa21.4■■□□□ 1.02
CIT-219ENST00000612548 REREQ9P2R6 1566 aa21.38■■□□□ 1.01
CIT-219ENST00000612548 CEP152O94986 1710 aa21.38■■□□□ 1.01
CIT-219ENST00000612548 E9PCH4 1651 aa21.38■■□□□ 1.01
CIT-219ENST00000612548 RPRD2Q5VT52 1461 aaKnown RBP21.38■■□□□ 1.01
CIT-219ENST00000612548 GGT6Q6P531 493 aa21.38■■□□□ 1.01
CIT-219ENST00000612548 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
CIT-219ENST00000612548 SIGLEC1Q9BZZ2 1709 aa21.34■■□□□ 1.01
CIT-219ENST00000612548 LMTK2Q8IWU2 1503 aa21.33■■□□□ 1.01
CIT-219ENST00000612548 EFCAB6Q5THR3 1501 aa21.32■■□□□ 1
CIT-219ENST00000612548 PLA2R1Q13018 1463 aa21.32■■□□□ 1
CIT-219ENST00000612548 AGLP35573 1532 aa21.31■■□□□ 1
CIT-219ENST00000612548 ABCC3O15438 1527 aa21.31■■□□□ 1
CIT-219ENST00000612548 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
CIT-219ENST00000612548 CCDC144AA2RUR9 1427 aa21.28■■□□□ 1
CIT-219ENST00000612548 WASHC2CQ9Y4E1 1318 aa21.28■■□□□ 1
CIT-219ENST00000612548 ZC3H13Q5T200 1668 aaKnown RBP21.27■■□□□ 1
CIT-219ENST00000612548 CAMSAP1Q5T5Y3 1602 aa21.27■■□□□ 1
CIT-219ENST00000612548 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
CIT-219ENST00000612548 TRPM2O94759 1503 aa21.25■□□□□ 0.99
CIT-219ENST00000612548 L3MBTL2Q969R5 705 aa21.25■□□□□ 0.99
CIT-219ENST00000612548 PTPRTO14522 1441 aa21.23■□□□□ 0.99
CIT-219ENST00000612548 NPATQ14207 1427 aa21.22■□□□□ 0.99
CIT-219ENST00000612548 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
CIT-219ENST00000612548 MLECQ14165 292 aa21.2■□□□□ 0.99
CIT-219ENST00000612548 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
CIT-219ENST00000612548 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
CIT-219ENST00000612548 CLTCQ00610 1675 aaKnown RBP21.17■□□□□ 0.98
CIT-219ENST00000612548 ARHGAP31Q2M1Z3 1444 aa21.16■□□□□ 0.98
CIT-219ENST00000612548 UGGT1Q9NYU2 1555 aa21.15■□□□□ 0.98
CIT-219ENST00000612548 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
CIT-219ENST00000612548 CNTLNQ9NXG0 1405 aa21.13■□□□□ 0.97
CIT-219ENST00000612548 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
CIT-219ENST00000612548 NOS1P29475 1434 aa21.11■□□□□ 0.97
CIT-219ENST00000612548 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
CIT-219ENST00000612548 PREX1Q8TCU6 1659 aa21.11■□□□□ 0.97
CIT-219ENST00000612548 KIF1BO60333 1816 aa21.1■□□□□ 0.97
CIT-219ENST00000612548 SYNMO15061 1565 aa21.1■□□□□ 0.97
CIT-219ENST00000612548 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
CIT-219ENST00000612548 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
CIT-219ENST00000612548 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
CIT-219ENST00000612548 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.96
CIT-219ENST00000612548 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.96
CIT-219ENST00000612548 KDM2AQ9Y2K7 1162 aa21.07■□□□□ 0.96
CIT-219ENST00000612548 MROH2AA6NES4 1674 aa21.06■□□□□ 0.96
CIT-219ENST00000612548 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
CIT-219ENST00000612548 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
CIT-219ENST00000612548 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
CIT-219ENST00000612548 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
CIT-219ENST00000612548 ADGRB3O60242 1522 aa21.03■□□□□ 0.96
CIT-219ENST00000612548 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
CIT-219ENST00000612548 FER1L4A9Z1Z3 1794 aa21.01■□□□□ 0.95
CIT-219ENST00000612548 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
CIT-219ENST00000612548 CHGAP10645 457 aaKnown RBP21■□□□□ 0.95
CIT-219ENST00000612548 SPATA31D1Q6ZQQ2 1576 aa21■□□□□ 0.95
CIT-219ENST00000612548 PRAG1Q86YV5 1406 aa21■□□□□ 0.95
CIT-219ENST00000612548 RALGAPBQ86X10 1494 aa20.97■□□□□ 0.95
CIT-219ENST00000612548 SLC52A1Q9NWF4 448 aa20.97■□□□□ 0.95
CIT-219ENST00000612548 IFT172Q9UG01 1749 aa20.97■□□□□ 0.95
CIT-219ENST00000612548 IDI1Q13907 227 aa20.96■□□□□ 0.95
CIT-219ENST00000612548 TRPM1Q7Z4N2 1603 aa20.95■□□□□ 0.95
CIT-219ENST00000612548 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
CIT-219ENST00000612548 HIRIP3Q9BW71 556 aaPredicted RBP20.94■□□□□ 0.94
CIT-219ENST00000612548 MYO5BQ9ULV0 1848 aa20.93■□□□□ 0.94
CIT-219ENST00000612548 TMEM131LA2VDJ0 1609 aa20.92■□□□□ 0.94
CIT-219ENST00000612548 C3P01024 1663 aa20.92■□□□□ 0.94
CIT-219ENST00000612548 PPLO60437 1756 aa20.92■□□□□ 0.94
CIT-219ENST00000612548 MYOM2P54296 1465 aa20.91■□□□□ 0.94
CIT-219ENST00000612548 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.94
CIT-219ENST00000612548 STAC3Q96MF2 364 aa20.9■□□□□ 0.94
CIT-219ENST00000612548 ROCK2O75116 1388 aaKnown RBP20.89■□□□□ 0.94
CIT-219ENST00000612548 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
CIT-219ENST00000612548 TNRQ92752 1358 aa20.88■□□□□ 0.93
CIT-219ENST00000612548 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
CIT-219ENST00000612548 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
CIT-219ENST00000612548 NEXMIFQ5QGS0 1516 aa20.87■□□□□ 0.93
CIT-219ENST00000612548 CARD11Q9BXL7 1154 aa20.87■□□□□ 0.93
CIT-219ENST00000612548 RPGRIP1LQ68CZ1 1315 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms