RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 EIF2AK4Q9P2K8 1649 aaKnown RBP25.75■■□□□ 1.71
SREK1-216ENST00000612404 PZPP20742 1482 aa25.73■■□□□ 1.71
SREK1-216ENST00000612404 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
SREK1-216ENST00000612404 ATP10AO60312 1499 aa25.71■■□□□ 1.71
SREK1-216ENST00000612404 KDM5DQ9BY66 1539 aa25.71■■□□□ 1.71
SREK1-216ENST00000612404 ARHGEF40Q8TER5 1519 aa25.69■■□□□ 1.7
SREK1-216ENST00000612404 DEPDC5O75140 1603 aa25.68■■□□□ 1.7
SREK1-216ENST00000612404 FAM135AQ9P2D6 1515 aa25.67■■□□□ 1.7
SREK1-216ENST00000612404 ZEB1P37275 1124 aaPredicted RBP25.67■■□□□ 1.7
SREK1-216ENST00000612404 FOXD1Q16676 465 aa25.67■■□□□ 1.7
SREK1-216ENST00000612404 PKD2Q13563 968 aa25.66■■□□□ 1.7
SREK1-216ENST00000612404 KANK1Q14678 1352 aa25.65■■□□□ 1.7
SREK1-216ENST00000612404 IQGAP3Q86VI3 1631 aa25.65■■□□□ 1.7
SREK1-216ENST00000612404 GGT6Q6P531 493 aa25.64■■□□□ 1.7
SREK1-216ENST00000612404 BCORL1Q5H9F3 1711 aa25.63■■□□□ 1.69
SREK1-216ENST00000612404 RNF17Q9BXT8 1623 aaKnown RBP25.62■■□□□ 1.69
SREK1-216ENST00000612404 MROH1Q8NDA8 1641 aa25.62■■□□□ 1.69
SREK1-216ENST00000612404 PRDM15P57071 1507 aaPredicted RBP25.62■■□□□ 1.69
SREK1-216ENST00000612404 REREQ9P2R6 1566 aa25.62■■□□□ 1.69
SREK1-216ENST00000612404 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
SREK1-216ENST00000612404 VWDEQ8N2E2 1590 aa25.57■■□□□ 1.68
SREK1-216ENST00000612404 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
SREK1-216ENST00000612404 AGLP35573 1532 aa25.55■■□□□ 1.68
SREK1-216ENST00000612404 SIGLEC1Q9BZZ2 1709 aa25.55■■□□□ 1.68
SREK1-216ENST00000612404 ANKRD30BQ9BXX2 1392 aa25.53■■□□□ 1.68
SREK1-216ENST00000612404 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
SREK1-216ENST00000612404 WASHC2CQ9Y4E1 1318 aa25.53■■□□□ 1.68
SREK1-216ENST00000612404 CEP152O94986 1710 aa25.51■■□□□ 1.67
SREK1-216ENST00000612404 TET3O43151 1660 aa25.51■■□□□ 1.67
SREK1-216ENST00000612404 MLECQ14165 292 aa25.5■■□□□ 1.67
SREK1-216ENST00000612404 LMTK2Q8IWU2 1503 aa25.47■■□□□ 1.67
SREK1-216ENST00000612404 E9PCH4 1651 aa25.47■■□□□ 1.67
SREK1-216ENST00000612404 ABCC3O15438 1527 aa25.47■■□□□ 1.67
SREK1-216ENST00000612404 EFCAB6Q5THR3 1501 aa25.44■■□□□ 1.66
SREK1-216ENST00000612404 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
SREK1-216ENST00000612404 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
SREK1-216ENST00000612404 PPP6R1Q9UPN7 881 aa25.4■■□□□ 1.66
SREK1-216ENST00000612404 TONSLQ96HA7 1378 aa25.39■■□□□ 1.66
SREK1-216ENST00000612404 PLA2R1Q13018 1463 aa25.39■■□□□ 1.65
SREK1-216ENST00000612404 RPRD2Q5VT52 1461 aaKnown RBP25.39■■□□□ 1.65
SREK1-216ENST00000612404 ESF1Q9H501 851 aaKnown RBP25.37■■□□□ 1.65
SREK1-216ENST00000612404 NPATQ14207 1427 aa25.37■■□□□ 1.65
SREK1-216ENST00000612404 CCDC144AA2RUR9 1427 aa25.37■■□□□ 1.65
SREK1-216ENST00000612404 SPHKAPQ2M3C7 1700 aa25.36■■□□□ 1.65
SREK1-216ENST00000612404 CLTCQ00610 1675 aaKnown RBP25.35■■□□□ 1.65
SREK1-216ENST00000612404 TIMELESSQ9UNS1 1208 aa25.35■■□□□ 1.65
SREK1-216ENST00000612404 CFAP65Q6ZU64 1925 aaKnown RBP25.35■■□□□ 1.65
SREK1-216ENST00000612404 PTPRTO14522 1441 aa25.33■■□□□ 1.65
SREK1-216ENST00000612404 TRPM2O94759 1503 aa25.32■■□□□ 1.64
SREK1-216ENST00000612404 ARHGAP31Q2M1Z3 1444 aa25.32■■□□□ 1.64
SREK1-216ENST00000612404 L3MBTL2Q969R5 705 aa25.25■■□□□ 1.63
SREK1-216ENST00000612404 CLTCL1P53675 1640 aa25.25■■□□□ 1.63
SREK1-216ENST00000612404 CNTLNQ9NXG0 1405 aa25.24■■□□□ 1.63
SREK1-216ENST00000612404 UGGT1Q9NYU2 1555 aa25.23■■□□□ 1.63
SREK1-216ENST00000612404 ZMYM3Q14202 1370 aa25.23■■□□□ 1.63
SREK1-216ENST00000612404 NOS1P29475 1434 aa25.23■■□□□ 1.63
SREK1-216ENST00000612404 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
SREK1-216ENST00000612404 PREX1Q8TCU6 1659 aa25.22■■□□□ 1.63
SREK1-216ENST00000612404 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
SREK1-216ENST00000612404 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
SREK1-216ENST00000612404 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
SREK1-216ENST00000612404 SYNMO15061 1565 aa25.19■■□□□ 1.62
SREK1-216ENST00000612404 ERVK-7P63135 1459 aa25.19■■□□□ 1.62
SREK1-216ENST00000612404 MROH2AA6NES4 1674 aa25.18■■□□□ 1.62
SREK1-216ENST00000612404 SPATA31E1Q6ZUB1 1445 aa25.15■■□□□ 1.62
SREK1-216ENST00000612404 KIF1BO60333 1816 aa25.14■■□□□ 1.62
SREK1-216ENST00000612404 CHGAP10645 457 aaKnown RBP25.14■■□□□ 1.62
SREK1-216ENST00000612404 DCAF11Q8TEB1 546 aa25.13■■□□□ 1.61
SREK1-216ENST00000612404 SPATA31D1Q6ZQQ2 1576 aa25.13■■□□□ 1.61
SREK1-216ENST00000612404 MADDQ8WXG6 1647 aa25.13■■□□□ 1.61
SREK1-216ENST00000612404 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
SREK1-216ENST00000612404 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
SREK1-216ENST00000612404 KDM2AQ9Y2K7 1162 aa25.12■■□□□ 1.61
SREK1-216ENST00000612404 PIK3C2BO00750 1634 aa25.12■■□□□ 1.61
SREK1-216ENST00000612404 CEBPAP49715 358 aaPredicted RBP25.12■■□□□ 1.61
SREK1-216ENST00000612404 IDI1Q13907 227 aa25.11■■□□□ 1.61
SREK1-216ENST00000612404 C3P01024 1663 aa25.09■■□□□ 1.61
SREK1-216ENST00000612404 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
SREK1-216ENST00000612404 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
SREK1-216ENST00000612404 RIMS1Q86UR5 1692 aaKnown RBP25.09■■□□□ 1.61
SREK1-216ENST00000612404 ADGRB3O60242 1522 aa25.06■■□□□ 1.6
SREK1-216ENST00000612404 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
SREK1-216ENST00000612404 TNRQ92752 1358 aa25.05■■□□□ 1.6
SREK1-216ENST00000612404 NBPF8Q3BBV2 869 aa25.04■■□□□ 1.6
SREK1-216ENST00000612404 STAG3Q9UJ98 1225 aa25.03■■□□□ 1.6
SREK1-216ENST00000612404 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
SREK1-216ENST00000612404 TMEM131LA2VDJ0 1609 aa24.99■■□□□ 1.59
SREK1-216ENST00000612404 MYO5BQ9ULV0 1848 aa24.97■■□□□ 1.59
SREK1-216ENST00000612404 PRAG1Q86YV5 1406 aa24.96■■□□□ 1.59
SREK1-216ENST00000612404 STAC3Q96MF2 364 aa24.95■■□□□ 1.59
SREK1-216ENST00000612404 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
SREK1-216ENST00000612404 IFT172Q9UG01 1749 aa24.94■■□□□ 1.58
SREK1-216ENST00000612404 NLRP1Q9C000 1473 aa24.93■■□□□ 1.58
SREK1-216ENST00000612404 PPLO60437 1756 aa24.92■■□□□ 1.58
SREK1-216ENST00000612404 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
SREK1-216ENST00000612404 NUTM2DQ5VT03 806 aaPredicted RBP24.91■■□□□ 1.58
SREK1-216ENST00000612404 MYOM2P54296 1465 aa24.91■■□□□ 1.58
SREK1-216ENST00000612404 PTPRMP28827 1452 aa24.9■■□□□ 1.58
SREK1-216ENST00000612404 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
SREK1-216ENST00000612404 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms